mRNA_P-wetherbeei_contig12603.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: A0A835YR74_9STRA (Uncharacterized protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR74_9STRA) HSP 1 Score: 262 bits (670), Expect = 3.400e-81 Identity = 126/196 (64.29%), Postives = 151/196 (77.04%), Query Frame = 3 Query: 747 NGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVSGR 1334 NGFVD + AYN+HHHL++RPDDVW AI +QFS YVN +AEKLR FV F GKKEL+V G L++ADYAALA MS +IA+NI DPS+REWV+PG +TTT HDKVVG++VLMAAMQ YF F L+CGLPSVTL G DW+ +E RA+RL DFD GDGLM +WS LL P+L QFT+SA+G P FWS+V R Sbjct: 5 NGFVDTIVHAYNEHHHLIIRPDDVWSAITIQFSYYVNLHAEKLRPIFVDFQGKKELVVDGFGSLFTADYAALATLMSGEIAKNIKDPSIREWVLPGFTTTTDHDKVVGSVVLMAAMQKYFSFKMRLSCGLPSVTLLGELSDWQEIEARAKRLADFDAGDGLMAEWSGLLAPILEQFTLSAQGKPST-DFWSKVCHR 199
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: D2V5A9_NAEGR (Predicted protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2V5A9_NAEGR) HSP 1 Score: 229 bits (584), Expect = 1.290e-68 Identity = 112/194 (57.73%), Postives = 142/194 (73.20%), Query Frame = 3 Query: 747 NGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 N FV + AY+ HH+LV++PDDVW+AI QFS YVN +E+LR FV FDGKK+L V+ G L+SADY +L+ DM+ QIAQNI DPSVREWVMP +TTT +D++VGA+VLMAAM+ YFD+ F L C LPSVTL G EDW + RA RL +FDT +G M+QWS LL PVL F S +G P+ +W+RV+ Sbjct: 7 NSFVKSAVQAYSYHHNLVIKPDDVWLAICTQFSNYVNGKSEELRGKFVDFDGKKQLTVYGSGNLFSADYVSLSLDMTNQIAQNIKDPSVREWVMPDFTTTTENDRMVGAVVLMAAMKNYFDYKFSLCCNLPSVTLLGEVEDWVKIRERANRLLEFDTKEGYMEQWSALLFPVLDHFVESIKGNPNKE-WWNRVA 199
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: A0A835YYL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL6_9STRA) HSP 1 Score: 229 bits (585), Expect = 2.270e-68 Identity = 127/256 (49.61%), Postives = 160/256 (62.50%), Query Frame = 3 Query: 585 MAITFQVATHKAETVSTRGLSESCDESGDDAAGKEEVIATAATASKDATYVRMKNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCL--TCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVSGRALSG 1346 M ITF++A H A V + + +++ IA+ + D TY+ NGFV+ V AYNQHHHL++RPDDVW AI VQFS V +AEKLR TFV F G K+L MS +IA+NI DPS+REWV+PG +TTT HDKVVGA+VLMAA+Q+YF +A+ L CGLPSVTL DW+ALE RA+RL +FD GDGLM WS+LL PVL T++A+G P FWS+V SG Sbjct: 1 MPITFKIADHDARAVVDPYVRF------EQETNRKDTIASTVPPASDKTYMAQSNGFVNTVVQAYNQHHHLIIRPDDVWSAITVQFSYSVKLHAEKLRPTFVDFQGTKKL------------------KMSGEIAKNIKDPSIREWVLPGFTTTTGHDKVVGAVVLMAAVQSYFRYAYYLLTVCGLPSVTLLSELADWQALEARAKRLVEFDAGDGLMTTWSKLLAPVLAHLTLTAQGKPST-DFWSKVCHHVASG 231
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: A0A151ZBU5_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZBU5_9MYCE) HSP 1 Score: 228 bits (580), Expect = 2.270e-67 Identity = 108/201 (53.73%), Postives = 150/201 (74.63%), Query Frame = 3 Query: 723 DATYVRMKNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRV 1325 D +Y+ N FV++VT +YN+HHHL++RPDD+W+AI+ QFS+Y+N NAEKLR FVSF GKKEL V G L +A Y L MS +IA+NI D SV++WV+P STTT DK+VG+I LM+++Q YFDF F L CG+P VTL G +DW++++TRA RL++FD+GDGLM +W +L+PVL QF S G +V+ +W+++ Sbjct: 43 DKSYLLGTNSFVNSVTKSYNEHHHLIIRPDDIWIAIICQFSIYLNVNAEKLRDKFVSFQGKKELEVDCNGSLRNAPYDELTLLMSTEIAKNIKDASVKDWVIPNFSTTTPTDKIVGSIALMSSLQKYFDFKFNLWCGIPRVTLLGTIDDWKSIKTRAERLSEFDSGDGLMTKWLVMLIPVLTQFIESVGGNVNVS-WWNKI 242
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: A0A152A7G1_9MYCE (Uncharacterized protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A7G1_9MYCE) HSP 1 Score: 227 bits (578), Expect = 4.370e-67 Identity = 108/201 (53.73%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 723 DATYVRMKNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRV 1325 D +Y+ N FV++VT AYN+HHHL+++PDD+W+AI+ QFS+YVN NAEKLR FVSF GKKEL V G L A Y L MS +IA+ I D SV++WV+P STTT DK+VG+I LM+++Q YFD+ F L CG+P VTL G +DW++++TRA RL++FD+GDGLM +W +L+PVL QF S G +V G+W+++ Sbjct: 43 DKSYLLGTNSFVNSVTLAYNEHHHLIIKPDDIWIAIISQFSIYVNLNAEKLRDKFVSFQGKKELEVTCSGSLRDAPYDVLTILMSTEIAKTIKDASVKDWVIPNFSTTTPTDKIVGSIALMSSLQKYFDYKFRLFCGIPRVTLLGTLDDWKSIKTRAERLSEFDSGDGLMTKWLVMLIPVLTQFIESVGGNVNV-GWWNKI 242
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: D2VWR3_NAEGR (Predicted protein n=2 Tax=Naegleria gruberi TaxID=5762 RepID=D2VWR3_NAEGR) HSP 1 Score: 225 bits (573), Expect = 2.490e-66 Identity = 108/195 (55.38%), Postives = 144/195 (73.85%), Query Frame = 3 Query: 744 KNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 KN FV + AY+ HH+ V++PDDVW+AI QFS YVN +E+LR FV F+GKK+LIV+ G L +ADYA+L+ DM+ QIA+NI DPSVREW+MP +TTT D+++GA+VLMAAM+ YFD+ F L C LP+VTL G EDW ++ RA RL +FDT + MK+WS+LL PVL +F S +G PD +W+RV+ Sbjct: 46 KNSFVMSAAIAYSSHHNWVIKPDDVWLAICTQFSNYVNGRSEELRDKFVDFEGKKQLIVYGGGTLMTADYASLSLDMTTQIAKNIKDPSVREWIMPDFTTTTETDRMIGAVVLMAAMKNYFDYMFSLCCNLPNVTLLGEVEDWVSIRERANRLLEFDTKENCMKKWSKLLFPVLDKFVESIKGNPDKE-WWNRVA 239
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: D2VY50_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VY50_NAEGR) HSP 1 Score: 224 bits (570), Expect = 7.580e-66 Identity = 122/249 (49.00%), Postives = 165/249 (66.27%), Query Frame = 3 Query: 585 MAITFQVATHKAETVSTRGLSESCDESGDDAAGKEEVIATAATASKDATYVRM-KNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 M ITF V+T K VS E D KE+ ++ S ++ + N F+ + AY++HH+LV+RPDDVW+AI QF+ YVN+ +E+LR+ FV FDGKKEL+V G L++AD A L M+ QIA+NI DPSVR+W+MP STTT +K+VGA+VLM+ + YFD+ + L CGLPSVTL G EDW+ L RA+RL +FDT LMK+WS++LLPVL QF SA G PD +W+R++ Sbjct: 1 MPITFTVSTKKPNEVSLPAF-EIKQILPDPTKTKEKFTLVKSSCSSSPDFLTVGNNSFIHSAILAYSEHHNLVIRPDDVWIAIATQFANYVNSKSEELRSKFVDFDGKKELVVVGGGTLFTADCADLTLRMTEQIAKNIKDPSVRDWIMPDFSTTTNLEKMVGAVVLMSTTKNYFDYKYVLRCGLPSVTLLGEKEDWQNLYERAKRLIEFDTKAKLMKKWSDMLLPVLEQFVKSASGNPDTK-WWNRIA 247
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: UPI000644E3B0 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E3B0) HSP 1 Score: 218 bits (556), Expect = 2.540e-63 Identity = 111/215 (51.63%), Postives = 144/215 (66.98%), Query Frame = 3 Query: 684 KEEVIATAATASKDATYVRMKNGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 KE V+ ++ D ++ N FV + AY+ H HLV+RPDDVW+A++ QFS YVN NAE LR FV+FDGK+EL V A G L+SA Y L MS +IA+NI D S+R+WV+PG +TTT DK+VG I LM+ +AYFDF F L CGLP VTL G +DW+ + R FDT DG MK+W ++LLPVL SAEG PDVA +W+R++ Sbjct: 64 KEPVVIRSSIKQNDMVWLG-HNSFVKSAVMAYSNHLHLVIRPDDVWLALITQFSYYVNGNAELLRDKFVTFDGKRELRVSAGGSLFSAPYEELTLMMSDKIAENIKDASIRDWVLPGFTTTTATDKIVGTIALMSTTKAYFDFVFELECGLPKVTLLGSVDDWKLIRQRLEGFLTFDTKDGHMKRWVDMLLPVLDHMVRSAEGNPDVA-WWNRIA 276
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: D2W2R6_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2W2R6_NAEGR) HSP 1 Score: 217 bits (553), Expect = 2.910e-63 Identity = 108/194 (55.67%), Postives = 140/194 (72.16%), Query Frame = 3 Query: 747 NGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 N FV + AY++HHH V++PDDVW+AI QFS YVN +EKLR+ FV FDGKKEL+V G L++A+Y L+ M+ +IA+NI DPSVREWVMP +TTT D++VGA+VLMAAM+ YFD+ F L C LPSVTL G EDW + RA RL +FDT + MK+WS+ L PVL +F S +G PD +W+RV+ Sbjct: 23 NSFVMSGVQAYSKHHHWVIKPDDVWIAICSQFSNYVNERSEKLRSKFVDFDGKKELVVKGIGTLYTANYEDLSIRMTSEIAKNIKDPSVREWVMPDFTTTTQSDRMVGAVVLMAAMKKYFDYKFELECNLPSVTLLGQVEDWIKIRERANRLLEFDTEEECMKKWSQYLFPVLDKFVESIKGNPDKE-WWNRVA 215
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Match: UPI001D042C09 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001D042C09) HSP 1 Score: 216 bits (550), Expect = 1.040e-62 Identity = 100/194 (51.55%), Postives = 142/194 (73.20%), Query Frame = 3 Query: 747 NGFVDAVTWAYNQHHHLVVRPDDVWMAIMVQFSLYVNANAEKLRTTFVSFDGKKELIVHAPGRLWSADYAALAHDMSFQIAQNINDPSVREWVMPGCSTTTIHDKVVGAIVLMAAMQAYFDFAFCLTCGLPSVTLEGIAEDWRALETRARRLTDFDTGDGLMKQWSELLLPVLRQFTVSAEGTPDVAGFWSRVS 1328 + FV + +Y+ HHHL++RPDDVW+AI QFSLYVNA++E+LR+ FV F+GKK+L V G L++A+Y L+ M+F+IA+NI DPSVREW+MP +TT D++VGA+VLMA+M+ YFD+ F L C LP VTL G EDW + +A RL +FD G + +WS++L PVL + SA+G PD++ FW+R++ Sbjct: 61 HSFVMSAFQSYSSHHHLIIRPDDVWLAICTQFSLYVNAHSEELRSKFVDFEGKKQLTVIGDGTLFTANYEELSAQMTFEIAKNIKDPSVREWIMPDFTTTKDVDRMVGAVVLMASMKQYFDYQFVLVCNLPKVTLLGQVEDWVKVREKANRLLEFDLKQGYLTEWSKMLFPVLDKLVQSAKGKPDLS-FWNRIA 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12603.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12603.1.1 >prot_P-wetherbeei_contig12603.1.1 ID=prot_P-wetherbeei_contig12603.1.1|Name=mRNA_P-wetherbeei_contig12603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=308bp MPRMLTLLRFERTFVLRFAHSYSGLYTHLYSPFIHFNLTLTQALTLYSVHback to top mRNA from alignment at P-wetherbeei_contig12603:2..1869+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12603.1.1 ID=mRNA_P-wetherbeei_contig12603.1.1|Name=mRNA_P-wetherbeei_contig12603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1868bp|location=Sequence derived from alignment at P-wetherbeei_contig12603:2..1869+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12603:2..1869+ >mRNA_P-wetherbeei_contig12603.1.1 ID=mRNA_P-wetherbeei_contig12603.1.1|Name=mRNA_P-wetherbeei_contig12603.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=924bp|location=Sequence derived from alignment at P-wetherbeei_contig12603:2..1869+ (Phaeothamnion wetherbeei SAG_119_79)back to top |