mRNA_P-wetherbeei_contig1249.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1249.2.1
Unique NamemRNA_P-wetherbeei_contig1249.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A8H3TX66_9TREE (Uncharacterized protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TX66_9TREE)

HSP 1 Score: 85.9 bits (211), Expect = 1.160e-16
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 1
Query:   31 YLRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTYHDGFLDDGFCPGGLRIVYIFPSCWNS-GRYKPDQSHMAYPTDSTPETKGTCPDTHPRRIFQVQLEH 423
            +++++S  + YY  G NDP +    V  +P    M+ GD   N+  P     + C        +   D F  D  C GG++    FPSCW+    YKPDQSHMAYPT    +  G CP +HP R+  + LE+
Sbjct:  111 FMQISSFNRFYYFLGRNDPSQP---VQAWPEGFKMLAGDP--NSKSPNNIYTYYCHRKADLTDEIAADNFNFDDPCIGGIKFDLTFPSCWDGINLYKPDQSHMAYPTHGLRD--GACPASHPIRLPSILLEY 235          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: UPI001D549086 (uncharacterized protein n=1 Tax=Truncatella angustata TaxID=152316 RepID=UPI001D549086)

HSP 1 Score: 72.4 bits (176), Expect = 3.620e-12
Identity = 47/139 (33.81%), Postives = 64/139 (46.04%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTY----HDGFLDDGFCPGGLRIVYIFPSCWNSGRY-KPD-QSHMAYP----TDSTPETKGTCPDTHPRRIFQVQLE 420
            L     +  YYI     PD    +V+ F     M++GD+   +P     +   C+ A G N            L   FCPGG+R V  FP+CW+      PD +SH+AYP    +D      GTCP+THP +I QV  E
Sbjct:  112 LDANGGITVYYIPS---PDTK-TNVTAFTPGFRMLVGDASLRSPGAARKVCHRCMPASGDNSNINCGAPDSQALPSDFCPGGIRSVITFPTCWDGKNTDSPDHESHIAYPISGGSDYDVGASGTCPETHPVKIPQVMYE 246          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A1V1TEP8_9FUNG (DUF1996 domain-containing protein n=2 Tax=Fungi TaxID=4751 RepID=A0A1V1TEP8_9FUNG)

HSP 1 Score: 71.6 bits (174), Expect = 6.850e-12
Identity = 43/139 (30.94%), Postives = 60/139 (43.17%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTY----HDGFLDDGFCPGGLRIVYIFPSCWNSGRYKP--DQSHMAYPTDSTPETK----GTCPDTHPRRIFQVQLE 420
            LR    +  YYI    + ++    V+ F     M++GD+    P     +   C+ A G N           FL    CPGG+R V  FP+CW+          SH+AYP  S  +      GTCP +HP +I QV  E
Sbjct:  112 LRADGGITVYYIPSPTEKEK----VTAFKPGFRMLVGDATARAPSAARKVCHRCMPATGDNSNINCGAPDSQFLPKQMCPGGIRSVITFPTCWDGVNTDSVDHMSHVAYPNSSYNDVMVGAYGTCPKSHPVKIPQVMYE 246          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A4Z0YVS3_9PEZI (DUF1996 domain-containing protein n=1 Tax=Xylaria hypoxylon TaxID=37992 RepID=A0A4Z0YVS3_9PEZI)

HSP 1 Score: 71.6 bits (174), Expect = 9.350e-12
Identity = 42/139 (30.22%), Postives = 60/139 (43.17%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTY----HDGFLDDGFCPGGLRIVYIFPSCWNSGRYKP--DQSHMAYPTDSTPE----TKGTCPDTHPRRIFQVQLE 420
            LR    +  YYI   ++ ++    V+ F     M++GD+    P     +   C+ A G N           FL    CPGG+R V  FP+CW+          SH+AYP  +         GTCP +HP +I QV  E
Sbjct:  255 LRADGGITVYYIPSPDEKEK----VTAFKPGFRMLVGDATARAPSTVRKVCHRCMPATGDNSNINCGAPDSQFLPTEMCPGGIRSVITFPTCWDGNNTDSIDHMSHVAYPNSTYSNGMAGAYGTCPGSHPVKIPQVMYE 389          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A0C2W474_9AGAM (WSC domain-containing protein n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C2W474_9AGAM)

HSP 1 Score: 71.6 bits (174), Expect = 9.580e-12
Identity = 50/156 (32.05%), Postives = 73/156 (46.79%), Query Frame = 1
Query:    1 PTVYYNDGD-KYLRLTSAMKAYYIG-GSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEH----IRFICVNADGTNGKTYHDGFLDDGFCPGGLRIVYIFPSCWN-----SGRYKPDQSHMAYPTDSTPETKGTCPDTHPRRIFQVQLEHQIAL 435
            P VYY+  D  Y  L S+   YY+  GSN        +  FP+   M+ G +  NT  P +     I + C+   G +G+T       + +CP G+R+  +FPSCWN     S  +K    H+ YP D   +   TCPD    R+  + LEH I +
Sbjct:   90 PAVYYHVRDGSYKLLKSSYMVYYLHRGSN--------IKAFPKGFRMIAGSAVKNTVDPNDPASAAINYHCLG--GGDGETLQ---FPEQYCPQGVRVQILFPSCWNGNDITSANFK---DHVRYPVDG--KEGNTCPDGFGTRLITLFLEHIIYM 227          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A1Y2XAQ3_9PEZI (Uncharacterized protein n=5 Tax=Daldinia TaxID=42360 RepID=A0A1Y2XAQ3_9PEZI)

HSP 1 Score: 71.6 bits (174), Expect = 1.090e-11
Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTYHDG----FLDDGFCPGGLRIVYIFPSCWNSGRY-KPD-QSHMAYPTDSTPET----KGTCPDTHPRRIFQVQLE 420
            LR    +  YYI  ++  ++    V+ F     M++GD+   +P     +   C+ A G N            L   FCPGG+R V  FP+CW+      PD +SH+AYP+  + +      GTCP +HP +I QV  E
Sbjct:  112 LRADGGITVYYIPSTSTQEK----VTAFKPGFRMLIGDAALRSPGDARKVCHRCMPATGDNSNVNCGAPDTQELPTKFCPGGIRSVITFPTCWDGKNLDSPDHKSHVAYPSPGSGDVGVGASGTCPASHPVKIPQVMYE 246          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A553HJX1_9PEZI (DUF1996 domain-containing protein n=1 Tax=Xylaria flabelliformis TaxID=2512241 RepID=A0A553HJX1_9PEZI)

HSP 1 Score: 68.6 bits (166), Expect = 8.960e-11
Identity = 45/139 (32.37%), Postives = 61/139 (43.88%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGT----NGKTYHDGFLDDGFCPGGLRIVYIFPSCWNSGRY-KPDQ-SHMAYPTDSTPETK----GTCPDTHPRRIFQVQLE 420
            LR    +  YYI      +     V+ F     M++GD+    P     +   C+ A G     N        L +  CPGG+R V  FP+CW+      PD  SH+AYPT S  +      GTCP +HP +I QV  E
Sbjct:  121 LRADGGITVYYIPSPTASEN----VTAFTPGFRMLVGDAASRGPNDARKVCHRCMPATGDKSNINCGAPDSQSLPNEMCPGGIRSVITFPTCWDGKTTDSPDHMSHVAYPTSSYSDVSVGAYGTCPASHPVKIPQVMYE 255          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A507BFN1_9PEZI (DUF1996 domain-containing protein n=1 Tax=Thyridium curvatum TaxID=1093900 RepID=A0A507BFN1_9PEZI)

HSP 1 Score: 66.6 bits (161), Expect = 4.110e-10
Identity = 42/135 (31.11%), Postives = 60/135 (44.44%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGTNGKTYHDG----FLDDGFCPGGLRIVYIFPSCWNSGRY-KPD-QSHMAYPTDSTPETKGTCPDTHPRRIFQVQLE 420
            L+    +  YYI     P +    V+ F     M++GD+   +      +   C+   G N            L    CPGG+R V  FP+CW+      PD +SH+AYP   T ++ G CP THP +I QV  E
Sbjct:  111 LKANGGITVYYI----PPYDGKTKVTAFKPGFRMLVGDAALRSKSKDPKVCHRCMPKTGDNPNIECSSPDTQSLPKTPCPGGIRTVITFPTCWDGKNTDSPDHESHVAYPASGTFDSGGPCPATHPVKIPQVMYE 241          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: A0A8J2I092_9PLEO (Hypothetical protein n=1 Tax=Alternaria atra TaxID=119953 RepID=A0A8J2I092_9PLEO)

HSP 1 Score: 65.1 bits (157), Expect = 1.350e-9
Identity = 47/140 (33.57%), Postives = 65/140 (46.43%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPD-EDHIDVSLFPRNLSMVMGDSHGNTPFPFEHIRFICVNADGT----NGKTYHDGFLDDGFCPGGLRIVYIFPSCWNSGRY-KPD-QSHMAYPTDSTPETK----GTCPDTHPRRIFQVQLE 420
            L+    +  YY      PD ++  DV+ F     M++GD+   +      + + C+ A G     N        L  GFCPGG+R V  FP+CW+      PD QSH+AY   S  ET     G CP++HP  I QV  E
Sbjct:   91 LKGEGGITVYYT-----PDTKNQTDVTAFRPGFRMLVGDATATSLSSARKVCYRCMPATGDHNHLNCAAPDAQTLPTGFCPGGIRSVITFPTCWDGINLDSPDHQSHVAYANGSL-ETDVGPTGKCPESHPVTIPQVMYE 224          
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Match: UPI001B38AD13 (uncharacterized protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B38AD13)

HSP 1 Score: 64.3 bits (155), Expect = 2.840e-9
Identity = 48/142 (33.80%), Postives = 67/142 (47.18%), Query Frame = 1
Query:   34 LRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDSHGNTPFP-FEHIRFICVNADGTNGKTYHDGFLDDG-----FCPGGLRIVYIFPSCWNSGRY-KPDQ-SHMAYPT-----DSTPETKGTCPDTHPRRIFQVQLE 420
            LR    +  YYI  +N+       V+ F     M++GD+  ++P      +   C+ A G +GK  + G  D       FCPGG+R V  FP+CW+      PD  SH+AY T     D+ P   G CP +HP  I QV  E
Sbjct:  113 LRGNGGITVYYIPSTNNKTT----VTAFKPGFRMLVGDAMADSPSKRARKVCHRCMPATG-DGKNINCGAPDSQTLPKEFCPGGIRAVITFPTCWDGKNLDSPDHMSHVAYATGAGANDAGPT--GKCPASHPVIIPQVMYE 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1249.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A8H3TX66_9TREE1.160e-1634.85Uncharacterized protein n=1 Tax=Naganishia liquefa... [more]
UPI001D5490863.620e-1233.81uncharacterized protein n=1 Tax=Truncatella angust... [more]
A0A1V1TEP8_9FUNG6.850e-1230.94DUF1996 domain-containing protein n=2 Tax=Fungi Ta... [more]
A0A4Z0YVS3_9PEZI9.350e-1230.22DUF1996 domain-containing protein n=1 Tax=Xylaria ... [more]
A0A0C2W474_9AGAM9.580e-1232.05WSC domain-containing protein n=1 Tax=Serendipita ... [more]
A0A1Y2XAQ3_9PEZI1.090e-1131.65Uncharacterized protein n=5 Tax=Daldinia TaxID=423... [more]
A0A553HJX1_9PEZI8.960e-1132.37DUF1996 domain-containing protein n=1 Tax=Xylaria ... [more]
A0A507BFN1_9PEZI4.110e-1031.11DUF1996 domain-containing protein n=1 Tax=Thyridiu... [more]
A0A8J2I092_9PLEO1.350e-933.57Hypothetical protein n=1 Tax=Alternaria atra TaxID... [more]
UPI001B38AD132.840e-933.80uncharacterized protein n=1 Tax=Cucurbitaria berbe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1249contigP-wetherbeei_contig1249:2912..3355 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog5207.AAW44484
PFAMsDUF1996,WSC
Model size444
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.07e-15
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota,39RW7@33154|Opisthokonta,3NW6X@4751|Fungi,3V3NA@5204|Basidiomycota,3VG8Z@5234|Tremellales
DescriptionDomain of unknown function (DUF1996)
Cds size444
COG categoryGO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185950.298733-CDS-P-wetherbeei_contig1249:2911..33551683185950.298733-CDS-P-wetherbeei_contig1249:2911..3355Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1249 2912..3355 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1249.2.1prot_P-wetherbeei_contig1249.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1249 2912..3355 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1249.2.1

>prot_P-wetherbeei_contig1249.2.1 ID=prot_P-wetherbeei_contig1249.2.1|Name=mRNA_P-wetherbeei_contig1249.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp
PTVYYNDGDKYLRLTSAMKAYYIGGSNDPDEDHIDVSLFPRNLSMVMGDS
HGNTPFPFEHIRFICVNADGTNGKTYHDGFLDDGFCPGGLRIVYIFPSCW
NSGRYKPDQSHMAYPTDSTPETKGTCPDTHPRRIFQVQLEHQIALPDF
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mRNA from alignment at P-wetherbeei_contig1249:2912..3355-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1249.2.1 ID=mRNA_P-wetherbeei_contig1249.2.1|Name=mRNA_P-wetherbeei_contig1249.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1249:2912..3355- (Phaeothamnion wetherbeei SAG_119_79)
CCGACCGTGTATTATAATGACGGGGATAAGTATTTACGCCTCACTTCCGC GATGAAGGCCTATTATATCGGCGGCTCTAACGACCCTGACGAAGACCATA TTGACGTGAGCCTCTTCCCGCGCAACCTGTCGATGGTGATGGGCGACTCT CACGGCAACACGCCCTTCCCGTTCGAACACATCCGATTCATCTGCGTCAA CGCGGATGGGACCAACGGAAAGACCTACCACGACGGCTTCTTGGACGACG GTTTTTGCCCTGGTGGTCTGCGTATCGTGTACATTTTTCCTAGTTGCTGG AACTCTGGCCGTTACAAGCCGGACCAAAGCCACATGGCGTATCCCACGGA CTCCACACCCGAGACGAAGGGCACGTGCCCGGACACGCACCCGCGGCGCA TTTTCCAGGTCCAGCTGGAGCATCAGATCGCCCTGCCGGACTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1249:2912..3355-

>mRNA_P-wetherbeei_contig1249.2.1 ID=mRNA_P-wetherbeei_contig1249.2.1|Name=mRNA_P-wetherbeei_contig1249.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig1249:2912..3355- (Phaeothamnion wetherbeei SAG_119_79)
CCGACCGTGTATTATAATGACGGGGATAAGTATTTACGCCTCACTTCCGC
GATGAAGGCCTATTATATCGGCGGCTCTAACGACCCTGACGAAGACCATA
TTGACGTGAGCCTCTTCCCGCGCAACCTGTCGATGGTGATGGGCGACTCT
CACGGCAACACGCCCTTCCCGTTCGAACACATCCGATTCATCTGCGTCAA
CGCGGATGGGACCAACGGAAAGACCTACCACGACGGCTTCTTGGACGACG
GTTTTTGCCCTGGTGGTCTGCGTATCGTGTACATTTTTCCTAGTTGCTGG
AACTCTGGCCGTTACAAGCCGGACCAAAGCCACATGGCGTATCCCACGGA
CTCCACACCCGAGACGAAGGGCACGTGCCCGGACACGCACCCGCGGCGCA
TTTTCCAGGTCCAGCTGGAGCATCAGATCGCCCTGCCGGACTTC
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