mRNA_P-wetherbeei_contig12473.1.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12473.1.4
Unique NamemRNA_P-wetherbeei_contig12473.1.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A836C8Q0_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8Q0_9STRA)

HSP 1 Score: 309 bits (792), Expect = 2.200e-98
Identity = 165/311 (53.05%), Postives = 209/311 (67.20%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGRDGKNGSPVLKLIDLGLAKQVQRGATDDE-VYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAA----------GAEHHSRRSRLAKFFKGEGSDSM*LGT 900
            Y+ + V VKL+ K +PD   V GEL +E D+L +L H NIV+L+GAGT+PERF++I RLDGGTLAQRCG+AL IRDRR +FR   PFTY+EL+ CARQLA ALRYMH  A+PG ++IHRDLK          +G   LK++D+GLAK V     D   VY++TGETGSLRYMAPEVA  +PYN KADVYGFG+ILWEMAAM+KPFEG+GR  FFELVV+  ++  PP+++ WP  F  LL +CW  DP +R   D +   L+AM+ +A+A A A          G   H     L    + +GS S   GT
Sbjct:  216 YKNLPVAVKLVRKDIPDKKTVYGELNMETDILMRLHHPNIVKLIGAGTQPERFMVIERLDGGTLAQRCGSALNIRDRRRRFRTKTPFTYLELVTCARQLAHALRYMHTEAVPGCMVIHRDLKPDNIAF----DGMGNLKILDMGLAKVVPLADGDPTAVYKMTGETGSLRYMAPEVALRKPYNGKADVYGFGMILWEMAAMRKPFEGIGRELFFELVVNGTSK--PPVDRNWPPEFGALLHKCWEKDPAKRPDFDLIINDLQAMIDDAKAQALAHEQDSNTLAFGQRGHHHNPLLGWLRRRQGSSSGQSGT 520          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA)

HSP 1 Score: 300 bits (768), Expect = 6.990e-95
Identity = 151/287 (52.61%), Postives = 198/287 (68.99%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTG-GRDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAAGAEHHSRRSRLAK 858
            Y     VVKLL K   D  IVR ELELEM++L +L + NIVRL+GAG  PERFL+I RLDGGTL+QRCG+  A+RDRR +F+R +PF Y+ELL+C RQ+A+ LRY+H+ AIPG I++HRD+K    G  +DG       KL+DLGLAK V R    D+ + +TGETGS RYMAPEVA + PYNEK DV+ +G++LWEMA ++KP++G+ R  F+  VV     +RPP+NK+WPK F +LL  CWA D + R    DV  RL+ ML EA       A+HH+ ++  AK
Sbjct:  258 YNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLNNENIVRLLGAGIEPERFLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGRQIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGD-----AKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRG--HVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEMLQEA-------ADHHTPKTNPAK 530          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 2.690e-94
Identity = 162/288 (56.25%), Postives = 199/288 (69.10%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGRDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAAGAEHHS-RRSRLAKF 861
            Y    VVVK++ K V D D VR ELELEM +L +LRH NIVRL+GAGTRPE FLLI RLDGGTLAQRCGNA+ +RDRR +FR  + FTY ELLR   QLAEAL+YMH  A+PG +++HRDLK    G     N    LKLIDLGL + V + A D   YQ+TGETGSLRYMAPEVA  +PYN  ADVYGF +ILWEMA M KPFE +GR  F + VV+    +RP +++ WP PFV+LLQ  W  D  +R  + +++T L+++L   EAAA A A+  S  R+   KF
Sbjct:  303 YGTTPVVVKVMRKDVQDRDTVRQELELEMGLLMRLRHPNIVRLLGAGTRPEPFLLIERLDGGTLAQRCGNAVKVRDRRRRFRHIRQFTYEELLRQGLQLAEALQYMHNEAMPGKLVVHRDLKPDNIGFDSQGN----LKLIDLGLGRVVSKAADDKATYQMTGETGSLRYMAPEVALGKPYNGSADVYGFAMILWEMATMTKPFEMMGREQFLQQVVEKG--VRPRVSENWPAPFVKLLQSGWHQDMHKRMSIVEITTTLRSLL---EAAATAAAQARSVERAPTRKF 581          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A835Z8G5_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G5_9STRA)

HSP 1 Score: 299 bits (766), Expect = 7.440e-94
Identity = 154/310 (49.68%), Postives = 202/310 (65.16%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRK-------------------LRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTG-GRDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAAGAEHHSRRSRLAKFFKG 870
            YR    VVKLL K VPD  +VR ELELEM++L +                   L+H NIVRL+GAG  PERFL+I RLDGGTL+QRCG+  A+RDRR +F+R +PF+Y+ELLRC RQLA+ LRY+H+ AIPG I+IHRDLK    G  +DG      +KL+DLGLAK + R    D  + +TGETGS RYMAPEVA + PYNEK DV+ + ++LWEMA ++KP++G+ R  F+  VV     +RPP+NK+WPK F +LL  CW+ D R R    D+  RL+ ML +A+       EHH+ ++      KG
Sbjct:  301 YREAACVVKLLRKDVPDAALVRRELELEMELLMRVLVTLXXXXXXXXXXXXXXLKHDNIVRLLGAGDDPERFLVIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFSYLELLRCGRQLADGLRYLHDEAIPGRIVIHRDLKPDNIGFNKDGD-----IKLLDLGLAKAIPRSEVQDAAFHMTGETGSTRYMAPEVAESRPYNEKVDVHSYSMVLWEMATLRKPYDGMARDQFYSAVVRG--HVRPPLNKRWPKEFSDLLSACWSEDWRARPSFADICNRLQEMLQDAD-------EHHTPKTSQTARSKG 596          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 7.190e-86
Identity = 141/286 (49.30%), Postives = 189/286 (66.08%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRC---------ARQLAEA-------------LRYMHESAIPGYILIHRDLKASKTGGRDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAML 792
            Y+   VVVKL+ K V D  +VR ELELE+ +LR++RH NIVRL+GAG  PERFL+IARLDGGTL+QRC +   +RDRRG+F+  KPF+++++ R             +AEA             LR++HE AIPG +++HRD+K    G     N    LKL+DLGL+K V +   D+ ++ +TGETGS+RYMAPEVA + PYNEK DVY FG+ILWEM+ +KKPF+G+G   F   V+  + R  PP++KKWPKP+ EL+Q CWA DP +R     V   L+ ML
Sbjct:  277 YKDQQVVVKLMRKDVQDAALVRDELELELALLRRVRHENIVRLLGAGKEPERFLIIARLDGGTLSQRCDHGSRLRDRRGRFKTGKPFSHMQVRRFFTTTQSHAGGHLVAEAGRLFNRKEVQRCALRHLHEEAIPGRMVVHRDVKPDNIGF----NADGDLKLLDLGLSKVVSKSEVDNTMFNMTGETGSVRYMAPEVAESRPYNEKVDVYSFGIILWEMSTLKKPFDGMGHDRFLSQVIRGSHR--PPVHKKWPKPWSELMQSCWAEDPSKRPSFAKVGDLLQGML 556          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA)

HSP 1 Score: 244 bits (624), Expect = 1.170e-75
Identity = 135/266 (50.75%), Postives = 169/266 (63.53%), Query Frame = 1
Query:    7 GVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAG--TRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGR-DGKNGSPVLKLIDLGLAKQVQRGATD-DEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAML 792
            G +VVVK L     D  +   E+E E+D+  +L H NIV LVGAG  ++  RF+++ RLDGGTL Q  G    IRDRR +F + K  +Y+E+L  AR LA+AL Y H  A+PG +++HRD+K    G   DG      LKLID GLAK V     D ++VY L+GETGSLRYMAPEVA   PYN KADVY FG+ILWEM A KKP++GL R SF+  +VD   R  PP+NKKWPK  V L+  CW+AD  QR     V  RL  M+
Sbjct:   72 GKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFFKRKQLSYLEVLNHARSLADALGYCHGKAVPGTLVLHRDVKPDNIGFTIDG-----TLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGER--PPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMI 330          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A6V2JN82_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2JN82_9STRA)

HSP 1 Score: 251 bits (642), Expect = 7.220e-75
Identity = 137/290 (47.24%), Postives = 189/290 (65.17%), Query Frame = 1
Query:    7 GVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPE--RFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGR-DGKNGSPVLKLIDLGLAKQVQRGATD-DEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAAGAEHHSRRSRLAKFF 864
            G  VVVK L     D  +   E+ELE+D+  KL H+NI  LVGAGT  +  RF+++ RLDGGTL Q  G    IRDRR +F R K F +VE++R AR +A+AL Y H  AIPG + +HRDLK    G   DGK     +KL+D GLA+ V+   +D ++VY ++G+TGSLRYMAPEVA++ PYN+KADVY FG+ILWE+ A KKP+EG+ +  F+  VV+   + RPPINKKWP+  V+L+Q+CW+ D R R    ++  RL AML + +     G+E    ++R++   
Sbjct:  389 GRPVVVKTLKPECQDVAVAINEIELELDIHSKLDHANICSLVGAGTTSKGVRFIVLERLDGGTLTQMLGYDNRIRDRRRRFWRKKQFAFVEVMRFARCIADALNYCHSQAIPGNMCLHRDLKPDNIGFTLDGK-----VKLLDFGLARIVKNSDSDSNDVYHMSGQTGSLRYMAPEVAKSLPYNQKADVYSFGIILWELNAYKKPYEGMNKDEFYMRVVEG--KERPPINKKWPEELVQLMQECWSFDARLRPSFHEIVERLDAMLSKEKG----GSEKKKSKNRISSLI 667          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A6V1S4W8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S4W8_HETAK)

HSP 1 Score: 247 bits (630), Expect = 1.470e-73
Identity = 126/266 (47.37%), Postives = 171/266 (64.29%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGRDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGE 798
            ++ + VVVK+L     D +  R +LE EM  L +LRH N+V + GAG  PERF+++ RLDGGTL +  G A       G  ++ KPF+Y+E L+ ARQ A ALRY+HE AIPGY+ IHRDLK    G +   NG  VLKL+D GLAK V RG    + YQL+G+TGS+RYMAPEV ++ PYNEK D+YGF +ILW+MA ++KPFEG+  + F + V     R RPP++KKWP  F  L++  W     +R    ++  RL  M+ +
Sbjct:  246 FKHLPVVVKMLKDDRLDMEAARADLEAEMHFLLRLRHPNVVEIYGAGFNPERFIVLERLDGGTLTEVGGGAS---HGIGPMKKRKPFSYLETLQYARQFAAALRYLHEDAIPGYVTIHRDLKPGNIGFKLLPNGGMVLKLMDFGLAKSVPRGEAAGQTYQLSGDTGSVRYMAPEVMQSIPYNEKCDIYGFSIILWQMATLRKPFEGMEVAEFRDRVT--LARQRPPMHKKWPPDFCALVEDGWQHKFNERPSAAEMIRRLDDMIAD 506          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.030e-72
Identity = 129/263 (49.05%), Postives = 172/263 (65.40%), Query Frame = 1
Query:   16 VVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAG--TRPERFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGR-DGKNGSPVLKLIDLGLAKQVQRGATD-DEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAML 792
            VVVK L     D  +   E+E E+D+  +L+HS+IV L GAG  ++  RF+++ RLDGG+L Q  G    IRDRR +F + K FTYVE+L+CAR +AEA+ Y+H  AIPG +++HRDLK    G   DG      +KLID GLA+ V+  + D DE+Y+++GETGSLRYMAPEVA  +PYN KADVY FG+ILWEM A KKPF+G+ +  FFE V     R  P INKKWP  F ++++ CW+ D   R     V  +L  +L
Sbjct:  403 VVVKWLKPECQDLAVAINEIEAELDIHAQLQHSHIVSLCGAGLTSKGSRFMVLERLDGGSLTQVLGYDTRIRDRRRRFWKKKHFTYVEVLKCARSIAEAMEYLHSDAIPGCMVLHRDLKPDNIGFTLDG-----TIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGER--PTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKIL 658          
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Match: B5Y4X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4X7_PHATC)

HSP 1 Score: 244 bits (624), Expect = 3.880e-72
Identity = 132/268 (49.25%), Postives = 173/268 (64.55%), Query Frame = 1
Query:    1 YRGVNVVVKLLNKAVPDPDIVRGELELEMDMLRKLRHSNIVRLVGAGTRPE--RFLLIARLDGGTLAQRCGNALAIRDRRGQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGGR-DGKNGSPVLKLIDLGLAKQVQRGATD-DEVYQLTGETGSLRYMAPEVARAEPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPINKKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAML 792
            ++G  VVVK L     D  +   E+E E+ +  +L H+NIV L+GAGT  +  RF+++ RLDGGTL Q  G    IRDRR +F R K F+YV++LR AR +A+A+ Y H+ AIPG +++HRDLK    G   DG      +K+ID GLAK V+  + D D++Y ++GETGSLRYMAPEVA A PYN  ADVY FG+ILWEM A KKPFEGL R  F+E VV    R  P +N+KWP     L+ +CW AD   R R  ++  RL A+L
Sbjct:  396 FQGKPVVVKTLKPECQDVVLAINEIEGELAVHSRLYHTNIVALIGAGTTSKGVRFVVLERLDGGTLTQMLGYDTRIRDRRRRFWRRKQFSYVDVLRVARSIADAMSYCHQEAIPGCMVLHRDLKPDNIGFTLDG-----TVKIIDFGLAKIVENASVDSDDIYTMSGETGSLRYMAPEVADALPYNAAADVYSFGIILWEMNATKKPFEGLNRELFYERVVHGGER--PSLNRKWPSQLTSLISECWDADMHNRPRFKEIVGRLDALL 656          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12473.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8Q0_9STRA2.200e-9853.05Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A835Z8J1_9STRA6.990e-9552.61Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A6H5JZF2_9PHAE2.690e-9456.25Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A835Z8G5_9STRA7.440e-9449.68Serine/threonine-protein kinase CTR1 n=1 Tax=Tribo... [more]
A0A6H5JUQ3_9PHAE7.190e-8649.30Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2LC32_9STRA1.170e-7550.75Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A6V2JN82_9STRA7.220e-7547.24Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
A0A6V1S4W8_HETAK1.470e-7347.37Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S189_9STRA1.030e-7249.05Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
B5Y4X7_PHATC3.880e-7249.25Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12473contigP-wetherbeei_contig12473:2..1983 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr43968
PFAMsPkinase_Tyr
Model size943
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons6
Evalue8.85e-69
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota,2XD1E@2836|Bacillariophyta
DescriptionProtein tyrosine kinase
Cds size807
COG categoryT
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12473.1.4prot_P-wetherbeei_contig12473.1.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12473 86..1931 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185949.8414428-UTR-P-wetherbeei_contig12473:1..851683185949.8414428-UTR-P-wetherbeei_contig12473:1..85Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12473 2..85 +
1683185949.8991795-UTR-P-wetherbeei_contig12473:1931..19831683185949.8991795-UTR-P-wetherbeei_contig12473:1931..1983Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12473 1932..1983 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185949.8520772-CDS-P-wetherbeei_contig12473:85..1141683185949.8520772-CDS-P-wetherbeei_contig12473:85..114Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 86..114 +
1683185949.8607044-CDS-P-wetherbeei_contig12473:322..6061683185949.8607044-CDS-P-wetherbeei_contig12473:322..606Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 323..606 +
1683185949.8705554-CDS-P-wetherbeei_contig12473:874..9991683185949.8705554-CDS-P-wetherbeei_contig12473:874..999Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 875..999 +
1683185949.8777063-CDS-P-wetherbeei_contig12473:1293..13361683185949.8777063-CDS-P-wetherbeei_contig12473:1293..1336Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 1294..1336 +
1683185949.8848217-CDS-P-wetherbeei_contig12473:1450..16511683185949.8848217-CDS-P-wetherbeei_contig12473:1450..1651Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 1451..1651 +
1683185949.8919559-CDS-P-wetherbeei_contig12473:1806..19311683185949.8919559-CDS-P-wetherbeei_contig12473:1806..1931Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12473 1807..1931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12473.1.4

>prot_P-wetherbeei_contig12473.1.4 ID=prot_P-wetherbeei_contig12473.1.4|Name=mRNA_P-wetherbeei_contig12473.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
MDMLRKLRHSNIVRLVGAGTRPERFLLIARLDGGTLAQRCGNALAIRDRR
GQFRRAKPFTYVELLRCARQLAEALRYMHESAIPGYILIHRDLKASKTGG
RDGKNGSPVLKLIDLGLAKQVQRGATDDEVYQLTGETGSLRYMAPEVARA
EPYNEKADVYGFGLILWEMAAMKKPFEGLGRSSFFELVVDDATRMRPPIN
KKWPKPFVELLQQCWAADPRQRARLDDVSTRLKAMLGEAEAAAAAGAEHH
SRRSRLAKFFKGEGSDSM*
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mRNA from alignment at P-wetherbeei_contig12473:2..1983+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12473.1.4 ID=mRNA_P-wetherbeei_contig12473.1.4|Name=mRNA_P-wetherbeei_contig12473.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1982bp|location=Sequence derived from alignment at P-wetherbeei_contig12473:2..1983+ (Phaeothamnion wetherbeei SAG_119_79)
TACCGTGGGGTGAACGTGGTGGTGAAACTCCTGAACAAGGCGGTCCCAGA CCCGGACATAGTCCGCGGCGAGCTCGAGCTGGAGATGGACATGCTGCGGA AGCTCCGCCACAGGTTCGGATTCACATAAGCTCATGCTGCTGAGATGTTA TACCATCCAGCAATGCTTTGGAATTTTTTGGTGACTTTTCCAGGTGTCAC GAAGAAGCTGAGTTCGCGCCGCACATTAGAATAACAATATTGTGGCGAAC GCAGTCAAATTTATTCAGCAAGATTGAATCAGCAAGGTTTACATATTTTC CTCTCCTTTCTCCGCCTGCAGCAACATCGTGCGCCTTGTCGGGGCCGGCA CGCGTCCGGAGCGCTTCCTGCTCATCGCTCGGCTGGACGGCGGCACGCTG GCGCAGCGCTGCGGCAACGCCCTAGCGATCCGCGACCGCCGGGGACAGTT TCGGCGGGCGAAACCGTTCACATACGTTGAGCTTTTGCGGTGCGCGCGGC AGCTGGCGGAGGCACTGCGGTACATGCACGAGTCGGCCATCCCAGGCTAC ATCCTCATCCACCGCGACCTGAAGGCGAGCAAAACGGGAGGCAGGGATGG GAAGAGTACTGGGAGATGGTATTCTTGCGGAATTGAGATGTTCTTCTCGC TTCTTGTTTTCTTGGACCGAGCAGTGTAACCAGCCGATCATAAGTGTGTG CTTGTTGATTGACCAAAGCAAGATGTGCGGTCTGCTGTGCAATCTACACC AATGCTTGAACGACGCTTTTTTCCCTGGTCCACCCACCCTCTTCCTCGTC CCTTGTGGCCGTCACCAACCCGCCGTCGGAGACGCACTCCAGCCGGATAA CATCGCATTTGATATTGCTCCAGACGGGTCGCCGGTGCTGAAGCTCATCG ACCTGGGGCTGGCGAAGCAGGTGCAGCGCGGAGCGACCGACGACGAGGTC TACCAGTTGACGGGGGAGACTGGCAGCCTCCGTTACATGGCCCCCGAGGT GCGTCAAGGGTGGGCTGACTGGCAGGACGGAAGCGCTAAGGTGTGGGAAA GGAAAATAGAAGGAGCATGCTAGTGCAGAAGAGGATTCCGTTGCAGGTGG CGTCAATCTTATCTGGATGTTTCTTTTGCGGTGCTGCCAACCGCGGCTGT TCTCTGTTCTCGCGATCATTTGCATTGCGAGCTACCAGATACAACCCGCT TGCAGATGGGAATGCAGCTTCGCCGTCTCTTATCTGCCGGGGTCGCCATT GTTGATGTCACTGCACTTTACCGGCTGTGCCTTATTCCGCAGGTGGCAAG AGCAGAGCCATACAACGAGAAGGCCGACGTCTACGGTACGTTTCCGCACT ATCGATGGCACGGGCGGTGTCCCCAAGAGCCAAAAACTATCCACCTTTTC ACGTTTCTTCCATCCGTTCGACCCGTCACTTATTTTCCCGCTCACGCAGG CTTCGGACTGATCTTGTGGGAGATGGCGGCGATGAAGAAGCCCTTCGAGG GCCTCGGCCGCAGCTCCTTCTTCGAGCTCGTCGTCGACGATGCCACGCGC ATGCGACCCCCCATCAACAAGAAGTGGCCCAAGCCTTTCGTTGAGCTGCT GCAGCAGTGCTGGGCCGCCGACCCGCGGCAGCGGGCCCGGCTGGACGACG GTAAGCACAGACAAACAAATACTCTTCAAACTCTCTGATTAGTTGGGGCT ATCCTTTCGGGTTGACGATCAGAAGCACTCGAGGACCACCTTCTTTCTTT TGCCTTTCTGATAACGTGAAACAATCGTTTTTGCTGCTGCGCTTTTCTGC TGCAGTGTCGACGCGCCTCAAGGCGATGCTCGGCGAGGCGGAGGCGGCGG CGGCGGCGGGCGCCGAGCACCACTCGCGCCGAAGCCGCCTCGCAAAGTTC TTCAAAGGGGAGGGGTCCGACTCCATGTAGTTGGGAACACAGGCCTGGTA AGTTCAAAATATGGTTCGTCTCTTCGAACTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12473:2..1983+

>mRNA_P-wetherbeei_contig12473.1.4 ID=mRNA_P-wetherbeei_contig12473.1.4|Name=mRNA_P-wetherbeei_contig12473.1.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=807bp|location=Sequence derived from alignment at P-wetherbeei_contig12473:2..1983+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACATGCTGCGGAAGCTCCGCCACAGCAACATCGTGCGCCTTGTCGG
GGCCGGCACGCGTCCGGAGCGCTTCCTGCTCATCGCTCGGCTGGACGGCG
GCACGCTGGCGCAGCGCTGCGGCAACGCCCTAGCGATCCGCGACCGCCGG
GGACAGTTTCGGCGGGCGAAACCGTTCACATACGTTGAGCTTTTGCGGTG
CGCGCGGCAGCTGGCGGAGGCACTGCGGTACATGCACGAGTCGGCCATCC
CAGGCTACATCCTCATCCACCGCGACCTGAAGGCGAGCAAAACGGGAGGC
AGGGATGGGAAGAACGGGTCGCCGGTGCTGAAGCTCATCGACCTGGGGCT
GGCGAAGCAGGTGCAGCGCGGAGCGACCGACGACGAGGTCTACCAGTTGA
CGGGGGAGACTGGCAGCCTCCGTTACATGGCCCCCGAGGTGGCAAGAGCA
GAGCCATACAACGAGAAGGCCGACGTCTACGGCTTCGGACTGATCTTGTG
GGAGATGGCGGCGATGAAGAAGCCCTTCGAGGGCCTCGGCCGCAGCTCCT
TCTTCGAGCTCGTCGTCGACGATGCCACGCGCATGCGACCCCCCATCAAC
AAGAAGTGGCCCAAGCCTTTCGTTGAGCTGCTGCAGCAGTGCTGGGCCGC
CGACCCGCGGCAGCGGGCCCGGCTGGACGACGTGTCGACGCGCCTCAAGG
CGATGCTCGGCGAGGCGGAGGCGGCGGCGGCGGCGGGCGCCGAGCACCAC
TCGCGCCGAAGCCGCCTCGCAAAGTTCTTCAAAGGGGAGGGGTCCGACTC
CATGTAG
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