mRNA_P-wetherbeei_contig12359.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A7K1B8Q6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B8Q6_9ACTN) HSP 1 Score: 145 bits (366), Expect = 1.680e-41 Identity = 74/95 (77.89%), Postives = 81/95 (85.26%), Query Frame = 1
Query: 193 GPVRKAVXXXXXXXXXXMLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
GPVRK+V MLAPDDVEADLDTILKDRLVAA+DE +EDEEEPE+R E+ DRLQPKRADEQLCPSCFLLVRQ+AP CPVGDD+CPLFS
Sbjct: 72 GPVRKSVASEDEDEDEDMLAPDDVEADLDTILKDRLVAADDEGDEDEEEPEERGESADRLQPKRADEQLCPSCFLLVRQSAPMCPVGDDDCPLFS 166
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A539DQG9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DQG9_9ACTN) HSP 1 Score: 137 bits (345), Expect = 2.060e-38 Identity = 69/78 (88.46%), Postives = 72/78 (92.31%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
M+APDDVEADLDTILKDRLVAAEDEVNEDEEE E+R E DRLQPKRADEQLCP CFLLVRQTAP CPVGDD+CPLFS
Sbjct: 82 MIAPDDVEADLDTILKDRLVAAEDEVNEDEEEVEERGEQADRLQPKRADEQLCPRCFLLVRQTAPMCPVGDDDCPLFS 159
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A3C2B045_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B045_9ACTN) HSP 1 Score: 137 bits (344), Expect = 3.390e-38 Identity = 77/119 (64.71%), Postives = 92/119 (77.31%), Query Frame = 1
Query: 121 DDEFAVIGEEFEADEXXXXXXD-TDGPVRKAVXXXXXXXXXXMLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLF 474
DDEF + +EF D XXX + T GPVR++V +LAPDDVEADLDTILKDRLVA +++ +++EPE+R E+ DRLQPKRADEQLCPSCFLLVRQ+APGCPVGDDECPLF
Sbjct: 46 DDEFGGLDDEFTDDTDXXXESEGTAGPVRRSVSEDEDEDEE-LLAPDDVEADLDTILKDRLVAVDEDDENEDDEPEERGESADRLQPKRADEQLCPSCFLLVRQSAPGCPVGDDECPLF 163
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A6I3WSW6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WSW6_9ACTN) HSP 1 Score: 130 bits (327), Expect = 1.230e-35 Identity = 83/120 (69.17%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 121 DDEFAVIGEEF-EADEXXXXXXDTDGPVRKAVXXXXXXXXXXMLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
DDEF+ I +EF +A DTDGPVR+AV XXXXXXXX MLAPDDVEADLDTILKDRLV+A+D E PEDR+E DRLQPKR+DE+LCPSCFLLVR AP CP+GDD+CPL S
Sbjct: 42 DDEFSGIDDEFVDAAGAEEAEDDTDGPVRRAVAXXXXXXXX-MLAPDDVEADLDTILKDRLVSADDSEXXXXE-PEDRSEASDRLQPKRSDERLCPSCFLLVRNGAPTCPIGDDDCPLLS 159
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A3C1L5C4_9ACTN (Uncharacterized protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A3C1L5C4_9ACTN) HSP 1 Score: 123 bits (309), Expect = 6.080e-33 Identity = 71/119 (59.66%), Postives = 82/119 (68.91%), Query Frame = 1
Query: 124 DEFAVIGEEFEADEXXXXXXDTDGPVRKAVXXXXXXXXXX-MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
DEF + A X DT GPVR++V XX ++APDDVEADLDTILKDRLVAA+ EPE++ E DRLQPKRADEQLCP+CFLLVRQ AP CP+GDDECP+FS
Sbjct: 44 DEFVPLDXXXXAAXXDEDDDDTSGPVRRSVPAGEDEDEXXXIIAPDDVEADLDTILKDRLVAADXXXXXXXXEPEEKGEAADRLQPKRADEQLCPTCFLLVRQGAPVCPIGDDECPIFS 162
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A7W1CMT1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CMT1_9ACTN) HSP 1 Score: 112 bits (281), Expect = 1.070e-28 Identity = 53/78 (67.95%), Postives = 64/78 (82.05%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
+L+PDDVEADLD ILKDR+V AE+E EP++R + +RLQPKRADEQLCP+CFLLVR APGCPVGDD+CP+F
Sbjct: 87 LLSPDDVEADLDRILKDRMVTAEEEXXXXXXEPDERGDPAERLQPKRADEQLCPNCFLLVRANAPGCPVGDDDCPIFG 164
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A6I3F639_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6I3F639_9ACTN) HSP 1 Score: 110 bits (275), Expect = 8.840e-28 Identity = 57/78 (73.08%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
M+APDDVEADLD+ILK+R+V E PE+R E DRLQPKRADE+LCPSCFLLVRQ APGCPVGDDECPLFS
Sbjct: 89 MVAPDDVEADLDSILKERMVXXXXXXXXXXE-PEERGEAADRLQPKRADERLCPSCFLLVRQGAPGCPVGDDECPLFS 165
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A7W0R0Q6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R0Q6_9ACTN) HSP 1 Score: 110 bits (276), Expect = 9.120e-28 Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
+L+PDDVEADLD ILKDR+V E+E P++R +TGDRLQPKRADEQLCP+CFLLVR AP CPVGDD CP+F
Sbjct: 102 LLSPDDVEADLDRILKDRMVTDEEEXXXXXXXPDERGDTGDRLQPKRADEQLCPTCFLLVRAVAPACPVGDDACPIFG 179
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A6I2WNJ5_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I2WNJ5_9ACTN) HSP 1 Score: 110 bits (274), Expect = 9.760e-28 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAEDEVNEDEEEPEDRTETG---DRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
++APDDVEADLDTILKDRLV AE E NEDEE+ + E G DRLQPKRADEQLC CFL+VR+ AP CPVGDD CPLFS
Sbjct: 77 VVAPDDVEADLDTILKDRLVTAE-ESNEDEEDEAEADERGADSDRLQPKRADEQLCSRCFLIVRRNAPNCPVGDDACPLFS 156
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Match: A0A7V9DJN1_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9DJN1_9ACTN) HSP 1 Score: 103 bits (256), Expect = 7.630e-25 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 1
Query: 244 MLAPDDVEADLDTILKDRLVAAE--DEVNEDEEE---PEDRTETGDRLQPKRADEQLCPSCFLLVRQTAPGCPVGDDECPLFS 477
MLAPDDVEADLD ILKDR+V ++ DE ++D+ E P DR E RLQPKR+DEQLC +CFLLVR +AP CPVGDD+CP+FS
Sbjct: 90 MLAPDDVEADLDRILKDRMVTSDEQDEADDDDVEDATPGDRGEDAGRLQPKRSDEQLCGTCFLLVRASAPLCPVGDDDCPIFS 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12359.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12359.1.1 >prot_P-wetherbeei_contig12359.1.1 ID=prot_P-wetherbeei_contig12359.1.1|Name=mRNA_P-wetherbeei_contig12359.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MADEDEEVLEPDEEFEVEEDVEAEPEELEDGELDEDALDEDDEFAVIGEEback to top mRNA from alignment at P-wetherbeei_contig12359:411..890+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12359.1.1 ID=mRNA_P-wetherbeei_contig12359.1.1|Name=mRNA_P-wetherbeei_contig12359.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig12359:411..890+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12359:411..890+ >mRNA_P-wetherbeei_contig12359.1.1 ID=mRNA_P-wetherbeei_contig12359.1.1|Name=mRNA_P-wetherbeei_contig12359.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig12359:411..890+ (Phaeothamnion wetherbeei SAG_119_79)back to top |