mRNA_P-wetherbeei_contig12220.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A7S3K2F9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K2F9_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.080e-38 Identity = 112/302 (37.09%), Postives = 144/302 (47.68%), Query Frame = 1 Query: 79 MADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLA---PLDTLAEQLKHESWVSSVK----------------PVRNAHMPVIKLDAS---------------------------------------------AAALAXXXXXXXXXXXXXXXXXXXSFDFPS---------------GT-HQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYGTR 744 MA+ L +A+ R A ARLR V +R WP+AR+++YGS TGLA+PASD+D V++ VP WW L PL+ LA +LK ESWVSS K P R+ + IK+D S +A +A S D P GT H G+ + +L+L+ P L PLVLVLKQLL ERGLND Y GGLSSYAL +M AAV+QR+AL PP++RP+LGAL L+TYGT+ Sbjct: 1 MAEGLRGIAQLRESYQLGACARLRAVAQRLWPSARLDVYGSVITGLAVPASDVDAVVSRVPQF--WWTLKPKQQPLNVLAAELKLESWVSSTKIVMGAVPLVKIETAPVPTRHGNRSTIKMDVSFVHHSPFASTPVASIQHSHDHQGSSLGHYLAYYRSLHWHGTTDIDSAGMANGNHLNGATGGNVLVNSSSS-DVPDHMPGCASSSGDAVGRGTIHSGVANTLFMLKLRCMFPELAPLVLVLKQLLYERGLNDPYAGGLSSYALVIMVAAVVQRYALTPPQQRPNLGALLLDTLSTYGTK 299
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A1V9Z488_9STRA (PAP-associated domain-containing protein 5-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z488_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.210e-35 Identity = 89/227 (39.21%), Postives = 129/227 (56.83%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYG 738 L H++L+M + ++ RRRP + L+ V R WP A+V ++GS ATGL P SD+D++IT+VP ++ ++ LA L+HE WV +++ + +P++K+ +A + SFD P H+G++T V RL + P L PL+LVLKQLLLE GLND+Y GGLSSY LT+M A+VL L P RP+LG LF L +G Sbjct: 459 LHHDILDMYTHIQDIVARRRPWQICVVTHLKECVTRLWPDAQVNVFGSFATGLGCPKSDVDLLITDVPRERC---RVSHVELLASLLRHEPWVQAIQVIERTTIPLVKVTTAAVPTSCGGAQGVIQLDI-------SFDQPQ--HRGVETCVFVQRLVAVLPELPPLMLVLKQLLLEHGLNDSYTGGLSSYGLTIMLASVLNPLQLVAPAHRPNLGELFLHFLHLFG 673
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: T0PXV4_SAPDV (NTP_transf_2 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0PXV4_SAPDV) HSP 1 Score: 137 bits (345), Expect = 3.160e-33 Identity = 87/227 (38.33%), Postives = 127/227 (55.95%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYG 738 L ++L+M ML ++ RRRP + L+ V R WP A V ++GS ATGL+ P SD+D++IT + + + ++ LA L+HE WV +++ + +P++K+ +A + SFD P H+G++T V RL S P L PL+LVLKQLLLE LND+Y GGLSSYALT++ A+VL+ L P RP+LG L L +G Sbjct: 479 LHDDILDMYAMLQDIVSRRRPWQICVVTHLKECVARLWPNAEVHVFGSFATGLSCPKSDVDLLITGAAYDRK---RTSSVELLASLLRHEPWVQAIQVIERTTIPLVKVTTAAVPSSFGDAQGVIRLDI-------SFDQPQ--HRGIETCMYVQRLVSVLPELPPLMLVLKQLLLEHDLNDSYSGGLSSYALTLLLASVLRPLQLVAPAHRPNLGELLLHFLQLFG 693
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A485KJN5_9STRA (Aste57867_8222 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJN5_9STRA) HSP 1 Score: 129 bits (323), Expect = 2.730e-30 Identity = 84/227 (37.00%), Postives = 122/227 (53.74%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYG 738 L H+VLEM ML ++ RRRP + ++ V R WP A V ++GS ATGL P SD+D++IT P + + ++ LA L+HE WV ++ + +P++K+ A + +FD P H+G++T V RL + P L PLVLVLKQ L LND+Y GGLSSY LT++ A++L H L+ +RP+LG L L +G Sbjct: 496 LHHDVLEMFAMLQDIVARRRPWQICVVTHVKDCVSRLWPRADVNVFGSFATGLNCPKSDVDLLITGAPSSSS-----SNMENLAALLRHEPWVQAIHVIDKTAIPLLKVTTGAIPTSCGDAQGVIQLDI-------TFDRPE--HRGVETCVFVQRLAAVLPELTPLVLVLKQFLQHANLNDSYTGGLSSYGLTLLVASIL--HPLQFCGQRPNLGHLVLHFLQLFG 706
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A2R5GVM8_9STRA (PolyA RNA polymerase cid14 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GVM8_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.850e-28 Identity = 85/232 (36.64%), Postives = 122/232 (52.59%), Query Frame = 1 Query: 46 VLQQLSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLA--PLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATY 735 VL LS + EM+ L ++A RRP A R+R V+ +P A L+GS TGLA P SD+D+V+ Q +G+ A + TLA+ L+ +SWV ++ V + +PVIKL + ++ F S +H GL+T +V RL + P L+PL LV+KQ L+ +GLND ++GGLSSY L +M A+LQR P L AVL T+ Sbjct: 655 VLDMLSQNLDEMSQSLDQIALTRRPWQLAVAERIRTAVQSIFPGATTRLFGSLETGLAAPCSDVDMVV-------QRFGVPARVAMRTLADHLRGQSWVQMIQSVEHTSVPVIKLATAQIPISFGNQGSLINV---------DITFDSYSHTGLRTCALVRRLMASYPPLKPLTLVIKQFLVVKGLNDPFVGGLSSYGLVLMVTAILQRWFPSGMHGLPCPSNLLGAVLMTF 870
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A7S0CXX3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CXX3_9EUKA) HSP 1 Score: 119 bits (297), Expect = 1.560e-27 Identity = 83/216 (38.43%), Postives = 117/216 (54.17%), Query Frame = 1 Query: 46 VLQQLSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQ-WWGLLAPLDT----LAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALE 678 V++++ H V MA L L+ RRP + + LR V WP ARVE+YGS AT L P+SD+D+V+ +V ++ Q + + P ++ LA L + WV VK + A +P++K+ A+ + SFD PS H+GL T V L + P+L PL +VLKQ L+ RGLND Y GGLSSY L +M VLQR L+ Sbjct: 104 VVKEVHHNVQSMAAALKALSLERRPWQISVVNALRVAVTALWPGARVEVYGSFATQLCAPSSDIDLVVCDVVEHYQSLFQDIKPRESCVAQLARHLSKQKWVQVVKTIERAAVPIVKVTATFREASGIQLDL-------------SFDSPS--HRGLSTCAFVRGLCAEFPMLVPLTMVLKQFLVTRGLNDPYSGGLSSYGLVLMLTRVLQRDRLQ 304
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A812SZF9_SYMMI (Trf4-1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SZF9_SYMMI) HSP 1 Score: 117 bits (293), Expect = 2.690e-27 Identity = 94/313 (30.03%), Postives = 134/313 (42.81%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITN--VPDNLQWWG--LLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAA-----------------------ALAXXXXXXXXXXXXXXXXXXXSFDFPS---------------------------------------------------------------------------GT--HQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPP 684 L+ +VL+MA L +A RRP AA+ R+R +V+ WP A+ E++GS TGLA+P+SD+D+V++ V L WWG L + L + L+ WVS+++ + + MP+IKL ++ ++A ++D P+ GT HQG+ T + VLRL S NP L PLVLVLKQ L +GL+D + GGLSSYALT+M AA+LQ HALE P Sbjct: 63 LTTDVLDMAGSLHRIANLRRPWQVAAIERVRVLVQSIWPQAQCEVFGSFGTGLAIPSSDVDIVVSGIGVAHQLHWWGGRALTAIAVLTQHLQQTDWVSTIRAIEHTAMPIIKLTTASVPMPALVGAGGVRRDFRGVIKIDLSIASPSASPQLQLQSQHLPPSYAYDRPAAFMQVPSGQQQQVGGAYAGGFGTGSPSRYSESPLHSGSEGPDSTTMSHLQLPVVAPQQIQAVSAPPPLXXXXXAAGTAPHQGVSTRDFVLRLCSLNPSLIPLVLVLKQFLQGKGLHDPFTGGLSSYALTIMVAAILQPHALERP 375
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A067CJ76_SAPPC (NTP_transf_2 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CJ76_SAPPC) HSP 1 Score: 118 bits (295), Expect = 1.450e-26 Identity = 84/227 (37.00%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYG 738 L ++L+M ML ++ RRRP + L+ V R WP A V ++GS ATGL+ P SD+D++IT V A K S ++++ + +P++K+ +A + SFD P H+G++T V RL S P L PL+LVLKQLLLE LND+Y GGLSSYALT++ A+VL L P RP+LG L L +G Sbjct: 460 LHDDILDMYAMLQDIVSRRRPWQICVVTHLKDCVARLWPDAEVHVFGSFATGLSCPKSDVDLLITGV----------------AYDRKRIS--NAIQVIERTAIPLVKVTTAAVPSSFGAAQGVIRLDI-------SFDQPQ--HRGIETCMYVQRLVSVLPELPPLMLVLKQLLLEHDLNDSYSGGLSSYALTLLLASVLSPLQLIAPAHRPNLGELLLHFLQLFG 659
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A7S4I3I4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I3I4_9EUKA) HSP 1 Score: 113 bits (283), Expect = 5.810e-25 Identity = 74/199 (37.19%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 142 RLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVMAAAVLQRHALEPPEERPSLGALFAAVLATYG 738 R+R +V W +A +++YGS ATGL +P SDLD+V+ +PD + G +P+ LA +LK + WV ++P+ A +PVIKL A+ TH GL TS +L+LK P L PLVL+LKQ L LN AY GGL+SY+L +M A+ L+ + + SLG L YG Sbjct: 628 RIRCLVGSLWSSAEIKIYGSIATGLCIPESDLDLVVY-IPDAVSVGG--SPVLLLAGELKGKPWVKQIQPIYTAKVPVIKLVVDNLAVDITFDVRSQAQPNTYAHTDLDHSNQVSTHTGLSTSKYILQLKKEFPALEPLVLILKQYLYCVLLNSAYTGGLASYSLVLMVASYLKFYG----KNNHSLGTLLLGFFELYG 819
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Match: A0A6G0XLY5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLY5_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.970e-23 Identity = 71/196 (36.22%), Postives = 105/196 (53.57%), Query Frame = 1 Query: 58 LSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPAARVELYGSAATGLALPASDLDVVITNVPDNLQWWGLLAPLDTLAEQLKHESWVSSVKPVRNAHMPVIKLDASAAALAXXXXXXXXXXXXXXXXXXXSFDFPSGTHQGLQTSNVVLRLKSGNPVLRPLVLVLKQLLLERGLNDAYMGGLSSYALTVM 645 L E+LE A + + + +RG VR+ WP A VE YGS +TG+ LP+SD+D+VI D+ L +LA+ LK E WV S+ V +A +P++KL + +++ +F+ + TH GL +++ L + P L PL +V KQLL ERGLNDAY GGLSSY++ +M Sbjct: 102 LHQEILEYARYTKSIVSEMAVHIEKTIDMVRGCVRKLWPEATVETYGSYSTGIWLPSSDIDLVILGTTDDTT-----THLKSLADVLKKEKWVESILVVESAKVPLLKLVSLDSSVPIDI----------------TFE-TANTHSGLMARDLIKSLVAELPELYPLAIVFKQLLRERGLNDAYTGGLSSYSIVLM 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12220.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12220.1.1 >prot_P-wetherbeei_contig12220.1.1 ID=prot_P-wetherbeei_contig12220.1.1|Name=mRNA_P-wetherbeei_contig12220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=241bp MTSAEEQVLQQLSHEVLEMADMLLELAERRRPVTQAALARLRGVVRRQWPback to top mRNA from alignment at P-wetherbeei_contig12220:268..1561- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12220.1.1 ID=mRNA_P-wetherbeei_contig12220.1.1|Name=mRNA_P-wetherbeei_contig12220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1294bp|location=Sequence derived from alignment at P-wetherbeei_contig12220:268..1561- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12220:268..1561- >mRNA_P-wetherbeei_contig12220.1.1 ID=mRNA_P-wetherbeei_contig12220.1.1|Name=mRNA_P-wetherbeei_contig12220.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=723bp|location=Sequence derived from alignment at P-wetherbeei_contig12220:268..1561- (Phaeothamnion wetherbeei SAG_119_79)back to top |