mRNA_P-wetherbeei_contig12202.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A6H5KRS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS0_9PHAE) HSP 1 Score: 235 bits (600), Expect = 7.790e-68 Identity = 113/163 (69.33%), Postives = 141/163 (86.50%), Query Frame = 1 Query: 22 VKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPAGIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFPVPVAA 510 +K QV FYFS++NL++DG LVSKMNA +C+P+ V++Q KI++LT D ALI ESVKDS+VC VTP GIKP+I+ ERNTIILREIPS+TP E +R+IFTG+G+AP+K +RSDVGDTWFV ME+E +A+ TILALR KTF+GK +KARLKSEN+LRSFFPVP AA Sbjct: 78 LKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTPDGIKPSIKQERNTIILREIPSDTPQEKIRKIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALTTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAA 240
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: D8LL21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL21_ECTSI) HSP 1 Score: 233 bits (593), Expect = 9.490e-68 Identity = 113/163 (69.33%), Postives = 139/163 (85.28%), Query Frame = 1 Query: 22 VKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPAGIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFPVPVAA 510 +K QV FYFS++NL++DG LVSKMNA +C+P+ V++Q KI++LT D ALI ESVKDS+VC VT GIKP+I+ ERNTIILREIPS TP E +REIFTG+G+AP+K +RSDVGDTWFV ME+E +A+ TILALR KTF+GK +KARLKSEN+LRSFFPVP AA Sbjct: 73 LKKQVEFYFSKQNLQSDGFLVSKMNAQMCVPVAVIAQFHKIQQLTSDTALIVESVKDSTVCTVTSDGIKPSIKQERNTIILREIPSETPQEKIREIFTGDGVAPIKSIRSDVGDTWFVTMESEDDALNTILALRGKTFEGKAIKARLKSENLLRSFFPVPTAA 235
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A7S4DKN7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKN7_HETAK) HSP 1 Score: 211 bits (537), Expect = 2.520e-65 Identity = 103/169 (60.95%), Postives = 135/169 (79.88%), Query Frame = 1 Query: 10 IRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPAGIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFPVPVAAAD 516 +R VK Q+ FYFSR+NL+TDG LVSKMNA++ +P+ V+++ +KI+ LT + +I +++ S VC VT IKP ++ERNTIILREIPSNTP E VREIFTGEGMAP+ +RSDVGDTWFV + +E A+A LALR++ F+G+PVKARLKSEN+LR+F+PVP AAAD Sbjct: 36 LREAVKKQIEFYFSRQNLQTDGFLVSKMNANMEVPITVIAEFAKIRALTREPDVIRAALEGSKVCIVTEDAIKPNFKTERNTIILREIPSNTPEEKVREIFTGEGMAPITNIRSDVGDTWFVTLGSEAAAVAACLALRERAFEGRPVKARLKSENLLRAFYPVPQAAAD 204
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A836CHL1_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL1_9STRA) HSP 1 Score: 200 bits (508), Expect = 6.120e-61 Identity = 99/166 (59.64%), Postives = 130/166 (78.31%), Query Frame = 1 Query: 22 VKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPAGIKPTIRSERNTIILREIPSNTP-------VETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFPV 498 ++ QV FYFS+ NL++DG LVS+M+A C+P+ V++Q +K++ LT DE IA +V +SSVC VTP GI+P +++ER+TIILREIPS+TP VRE+F GEGMAP++ +RSDVG TWFV +E +AMATILALR +TF+GKPVKARLK EN+LRSFFPV Sbjct: 57 LRQQVEFYFSKANLQSDGFLVSRMDASGCVPISVIAQFAKVRALTTDEGAIAAAVANSSVCTVTPQGIRPNLKAERHTIILREIPSDTPPAKASCCCTCVRELFAGEGMAPIRGVRSDVGATWFVTCASEADAMATILALRSRTFEGKPVKARLKGENLLRSFFPV 222
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A0W8DNS3_PHYNI (Ammonium Transporter (Amt) Family n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DNS3_PHYNI) HSP 1 Score: 182 bits (463), Expect = 9.840e-53 Identity = 93/166 (56.02%), Postives = 126/166 (75.90%), Query Frame = 1 Query: 4 ADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPA--GIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFP 495 A+++ +K QV FYFSR NL D LVS+MN+ + +P+ V+ SKIK+LT+D+AL+ ++V+DS+VC++ + IKP I+SER TIILREIPS+T E V IF EG V +RSDVGDTWFV M +E EA++T+LALR KTF+G P+KARLKSEN+L+SF+P Sbjct: 12 AELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVLKSFYP 175
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A6G0W682_9STRA (HTH La-type RNA-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W682_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.790e-51 Identity = 99/170 (58.24%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 10 IRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPAG--IKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFPVPVAAA 513 ++ VK QV FYFS+ NL D LVS+MNA + +PL V+ SKIK+LTED AL+ E++KDS VC+++P G IKP I+SERNTIILREIPS T + V IF G G V +RSDVGDTWFV M +E A+ T+LALR K+F+ P+KARLKSENILRSF P +AA Sbjct: 11 LKDAVKNQVEFYFSKANLANDSFLVSQMNAQMYVPLDVILGFSKIKQLTEDAALVVEAIKDSKVCSLSPEGDAIKPNIKSERNTIILREIPSATEPKVVEAIFDGCGT--VTSVRSDVGDTWFVTMASEEVAVNTLLALRSKSFNDAPIKARLKSENILRSFIPTDTSAA 178
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: G4YGZ8_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4YGZ8_PHYSP) HSP 1 Score: 182 bits (461), Expect = 2.190e-50 Identity = 94/166 (56.63%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 4 ADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPA--GIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFP 495 A+++ +K QV FYFSR NL D LVS+MN+ + +P+ V+ SKIK+LT+D AL+ E+V+DS++C++ A IKP I+SER TIILREIPS+T E V IF G G V +RSDVGDTWFV M TE EA++T+LALR KTF+G +KARLKSEN+L+SF+P Sbjct: 28 AELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDAALLVEAVQDSTICSLNSAKDAIKPNIKSERTTIILREIPSSTKPEEVEAIFDGCGK--VASVRSDVGDTWFVTMNTEAEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYP 191
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A0W8C538_PHYNI (La-related protein 4 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8C538_PHYNI) HSP 1 Score: 182 bits (463), Expect = 1.210e-49 Identity = 93/166 (56.02%), Postives = 126/166 (75.90%), Query Frame = 1 Query: 4 ADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPA--GIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFP 495 A+++ +K QV FYFSR NL D LVS+MN+ + +P+ V+ SKIK+LT+D+AL+ ++V+DS+VC++ + IKP I+SER TIILREIPS+T E V IF EG V +RSDVGDTWFV M +E EA++T+LALR KTF+G P+KARLKSEN+L+SF+P Sbjct: 267 AELKEAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDDKALLVDAVQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVGAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAPIKARLKSENVLKSFYP 430
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: A0A2P4XI52_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XI52_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.270e-49 Identity = 91/166 (54.82%), Postives = 124/166 (74.70%), Query Frame = 1 Query: 4 ADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPA--GIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFP 495 A+++ +K QV FYFSR NL D LVS+MN+ + +P+ V+ SKIK+LT++ AL+ E+V+DS++C++ + IKP I+SER TIILREIPS+T E V IF EG V +RSDVGDTWFV M +E EA++T+LALR KTF+G +KARLKSEN+L+SF+P Sbjct: 12 AELKQAIKRQVEFYFSRANLANDAYLVSQMNSQMYVPVEVIINFSKIKQLTDNTALLVEAVQDSTICSLNSSKDAIKPNIKSERTTIILREIPSSTKPEEVEAIF--EGCGKVASVRSDVGDTWFVTMNSESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYP 175
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Match: H3GMU1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMU1_PHYRM) HSP 1 Score: 179 bits (455), Expect = 1.410e-49 Identity = 91/166 (54.82%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 4 ADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKELTEDEALIAESVKDSSVCAVTPA--GIKPTIRSERNTIILREIPSNTPVETVREIFTGEGMAPVKQLRSDVGDTWFVYMETEREAMATILALRDKTFDGKPVKARLKSENILRSFFP 495 A+++ +K+QV FYFSR NL D LVS+MN+ + +P+ ++ SKIK+LT++ AL+ E+++DS+VC++ + IKP I+SER TIILREIPS+T E V IF EG V +RSDVGDTWFV M TE EA++T+LALR KTF+G +KARLKSEN+L+SF+P Sbjct: 12 AELKEAIKSQVEFYFSRANLANDAYLVSQMNSQMYVPVEIIINFSKIKQLTDNTALLVEAMQDSTVCSLNSSKDAIKPNIKSERTTIILREIPSSTQPEEVEAIF--EGCGKVASVRSDVGDTWFVTMNTESEAVSTLLALRSKTFNGAAIKARLKSENVLKSFYP 175 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12202.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12202.1.1 >prot_P-wetherbeei_contig12202.1.1 ID=prot_P-wetherbeei_contig12202.1.1|Name=mRNA_P-wetherbeei_contig12202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=229bp AADIRGQVKAQVVFYFSRENLKTDGNLVSKMNADLCIPLHVVSQLSKIKEback to top mRNA from alignment at P-wetherbeei_contig12202:871..2028- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12202.1.1 ID=mRNA_P-wetherbeei_contig12202.1.1|Name=mRNA_P-wetherbeei_contig12202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1158bp|location=Sequence derived from alignment at P-wetherbeei_contig12202:871..2028- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12202:871..2028- >mRNA_P-wetherbeei_contig12202.1.1 ID=mRNA_P-wetherbeei_contig12202.1.1|Name=mRNA_P-wetherbeei_contig12202.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=687bp|location=Sequence derived from alignment at P-wetherbeei_contig12202:871..2028- (Phaeothamnion wetherbeei SAG_119_79)back to top |