mRNA_P-wetherbeei_contig122.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A6H5KC39_9PHAE (Aa_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC39_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.410e-49 Identity = 113/283 (39.93%), Postives = 146/283 (51.59%), Query Frame = 1 Query: 1 NSPRMTMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQS-----PFTDTS---------------------PVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLD---YDGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPR-------STLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 NS +T +LVLNYMIG+GILN PQVF+ +GI AT+LY + VA W+G+VVL+ A+E S T TS P+ ++ LA T G G AVD+ IV+ N G SY++++ LT LL W D W S V P M +LFV PCL+RHFS+L WLA S I LVV G YA E +++ W D LGS+VFAL CA A HAY SM P+S WR ++V+G+ CY +G Sbjct: 90 NSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVSAVAIWLGIVVLINASEISFPHGYARTGTSSDNGPNELAEGGGXXXXXXADPLDDIEFAQLARETVGPLGPLAVDAAIVLCNFGDVCSYVILVGSLTGSLLLEWFGGTASDVWWASFSVVTPVMAVLFVFPPCLIRHFSNLRWLAVFSFCTICSVVALVVIGGPIYASEERAEPDHDPDLDTSVVWWDWVGALANLGSIVFALSCAPAVLHAYSSMTPQSTRAWRSVATWALVVGACLCYSMG 372
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: D7FZR9_ECTSI (Transmembrane amino acid transporter protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR9_ECTSI) HSP 1 Score: 175 bits (444), Expect = 2.670e-48 Identity = 111/283 (39.22%), Postives = 144/283 (50.88%), Query Frame = 1 Query: 1 NSPRMTMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQS---------PFTDTSP-----------------VAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLD---YDGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPR-------STLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 NS +T +LVLNYMIG+GILN PQVF+ +GI AT+LY + VA W+G+VVL+ A+E S +D P + ++ LA T G G AVD+ IV+ N G SY++++ LT LL W D W S V P M +LFV PCL+RHFS+L WLA S I LVV G YA E +++ W D LGS+VFAL CA A HAY SM PRS WR + ++ +G CY +G Sbjct: 90 NSKVLTTLLVLNYMIGSGILNSPQVFEGSGIGPATILYAVSAVAIWLGIVVLINASEISFPQGYARTGTSSDNGPSELAGGRGXXXXXXADRLDDIEFAQLARETVGPLGPLAVDAAIVLCNFGDVCSYVILVGSLTGSLLLEWFGGTASDVWWASFSVVTPVMAVLFVFPPCLIRHFSNLRWLAVFSFCTICSVVALVVIGGPIYANEERAEPGHDPDLDASVVWWDWVGAVANLGSIVFALSCAPAVLHAYSSMTPRSTRAWRSVSTWALGVGVCLCYSMG 372
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A6V1XUJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XUJ0_HETAK) HSP 1 Score: 154 bits (388), Expect = 2.030e-40 Identity = 91/243 (37.45%), Postives = 126/243 (51.85%), Query Frame = 1 Query: 16 TMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDG-WAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 T+ L+LN MIG+GILNQPQVF ++GI A L+Y + A W+GL +L+E +T +A +G G VD +IVVGN GA +SY+VVI+ + LLE W G W S P L VL CL R + + ++ SI AIS +V+F+G + + W F LGS +FAL CA AAFHA+ +M + W T +VV+G+G C +G Sbjct: 66 TIFLILNTMIGSGILNQPQVFADSGIIGAFLMYGISCYAIWLGLQLLIEVGVAHKALG--------FTEVANLAFGRRGDLLVDWSIVVGNFGALLSYMVVISGELTVLLEGWTGESGKWYTSELFNLPLATLFLVLPFCLQRFYGHFVLISIFSIFAISTVLVVVLFFGPTVGADDRAASGAINWFSLSGTFSSLGSALFALSCAYAAFHAFEAMRRNTGAAWAGATTPAVVIGAGMCTSMG 300
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A6V2Y555_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Y555_HETAK) HSP 1 Score: 140 bits (352), Expect = 3.520e-35 Identity = 91/250 (36.40%), Postives = 135/250 (54.00%), Query Frame = 1 Query: 16 TMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWL---DYDG-WAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRST--LRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPV--WRDTTAQSVVLGSGACYIIG 741 TM L+LN MIG+GILNQ QVF EAG+ LLY+ G +GL +L++A +S A+ +T LA YG G D T+++ N G +SY V+ T D+L++ + D D W Y P +V L +L CL R F ++++ LSI+AI+ V+ G SEG + + W+ M +K GSVVFA+ CA AAFHA++S+ P V W ++ ++V+G+ C + G Sbjct: 67 TMFLLLNTMIGSGILNQAQVFSEAGVIGTLLLYVAGGYTIHLGLELLIKAGVRS--------ARLGFTELAHHAYGRRGDLLTDWTVILCNFGGLLSYFTVVGGQTCDILKDLVGASDGDSRWYTQEYAVLPVVVALAILPLCLTRRFGHFVYVSYLSISAIAAVVLCVLIAGP----SEGKQYRSEPILWISVPGMAQKFGSVVFAIACAYAAFHAFVSLRPELQTVGQWDRVSSLAIVVGTLMCAVTG 304
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A482SCF6_9ARCH (Aa_trans domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCF6_9ARCH) HSP 1 Score: 138 bits (348), Expect = 5.160e-35 Identity = 89/249 (35.74%), Postives = 129/249 (51.81%), Query Frame = 1 Query: 1 NSPRMTMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRS--LPVWRDTTAQSVVLGSGACYIIG 741 NS +T L+LN MIG+GILNQP VF+E+G+ + ++ A VATW GL+ L A + + S +AK + + G VD +I+ G+ + Y++V+ SDLL++W Y+T V +FV CL RHF L WL+ SI AI A L+V G G + + + M + GS++FAL CASA F AY++ EP S +P W T +V GS C ++G Sbjct: 61 NSAYLTGFLLLNTMIGSGILNQPYVFRESGVLGGLIGFVLASVATWTGLLCLTAAGIKEDVLEYSNLAKRAFENW--------GERLVDISIICLTFGSQLGYILVVGTTLSDLLDSW-GCSNVVCGEYLTTIISVTVFVTPVCLFRHFGHLAWLSLFSIGAIV-AVLLLVMIGGPIKHELGHKSNDYKVISLLGMIKSTGSIIFALSCASANFQAYITTEPSSQNMPAWAKITGSAVFSGSLMCAMMG 299
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A7S2USJ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USJ8_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.380e-34 Identity = 86/247 (34.82%), Postives = 129/247 (52.23%), Query Frame = 1 Query: 16 TMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDGWAV-----SLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 T++L++N MIG+GILNQP VF +AGI A ++Y ATW+GLV+L+ A ++ D S LAG +G G D + VGN GA +SYL VI S++L D G + + + P +V+LF L CL R + + ++ +SI +I+ LV+F+G + W + E+LGS VFA C+ A FHAY SM+P S + +V++G+ C + G Sbjct: 65 TIVLLINTMIGSGILNQPYVFSQAGIGATLIIYAITAYATWLGLVLLIRAGTKAKSMDLSD--------LAGYCFGDVGDKLTDIFVAVGNFGALLSYLTVIGGEASEMLGEIGDLSGSDMVKEFGKIQIILPIIVVLFSLPLCLTRLYGHFVMISTISIFSITCVMGLVLFYGP--IAGSNYQDEPVVWFNFLGAVEELGSTVFAFACSYAVFHAYNSMDPGSQKGFDKLAGVTVMIGAFMCLVTG 301
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A835Z8W9_9STRA (Aa_trans domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8W9_9STRA) HSP 1 Score: 131 bits (330), Expect = 1.120e-32 Identity = 83/235 (35.32%), Postives = 118/235 (50.21%), Query Frame = 1 Query: 40 MIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDGWAVS-LYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 M+G+GILNQ QVF EAGIAA T+LY V W+G VVL+EAA A+ DY +A TYG +G A D+ I +GN A +SY+++I +++DLL++W G + Y T P + + CL+ A+ +G P WL+ MFE+ GSV+FAL A AA HAY+ + P + WR + ++ +GS CY G Sbjct: 1 MVGSGILNQAQVFAEAGIAATTVLYAFGMVTVWMGSVVLIEAAHALQLVG----AQLDYRVVATITYGQSGGCAADAVIAIGNFAANLSYILLIGSISADLLQDWTGSTGSPFTHAYFTTPVLSFGVIFPLCLV-------------------------------ALDDGEPLVLWNWLE---MFERAGSVIFALSFAPAALHAYMGLVPCTPEQWRKVVSIAIAVGSVVCYTTG 197
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A7S3HJ43_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ43_9STRA) HSP 1 Score: 128 bits (321), Expect = 8.690e-31 Identity = 89/249 (35.74%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 1 NSPRMTMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSME--PRSLPVWRDTTAQSVVLGSGACYIIG 741 NS +T L+LN MIG+GILNQP VF E+GI L + +ATW GL+ L EA + Y+ LA + A G VD I+V G+ + Y++V+ L+SDLL +W A T V +FV C+ RHF L L+ SI AI A L+VF S S + D M +GS+VF++ C SA F A++S E R++ WR T +V G+ C +G Sbjct: 67 NSAYLTTFLLLNTMIGSGILNQPYVFAESGILGGLLGFFITTIATWTGLLCLTEAGVHENILE--------YSGLAKKAFPAFGELMVDIAIIVLTFGSQLGYILVVGTLSSDLLRSW-GCSSVACGDMFTTIISVAVFVTPVCMYRHFGHLAILSLFSIAAIV-AVLLLVFIAGPIKHSVDHKSSNYKLFDLNGMLTSVGSIVFSMECCSANFQAFVSTERKSRNMNTWRSVTGVAVFAGAIMCASMG 305
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A835Z9L5_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9L5_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.010e-30 Identity = 79/245 (32.24%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 16 TMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDYDGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRST---LRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 TM L+ IG+GI+NQPQV+ +G+ LY+ A W+G V++V++A+ + DY LA T+G G AVD +I V N A +SY+++I +TS+L++ W D + Y T P M LLFV L+ H++ L+ L + AI +V+F+G + + V T + + M +K GSV+FA A HAY+ + PR+ W+ ++ G+ C +G Sbjct: 32 TMFLI----IGSGIMNQPQVWMMSGVIGTPFLYVICFSAVWLGSVMVVKSADNLKLVGKNL----DYAVLAHTTHGPMGSFAVDGSIAVYNATACLSYVLLIGSMTSELVQGWSGSDSFVTQSYFTTPIMALLFVFPLGLLPHYTHTQKLSILGVAAIVVVVAVVLFYGPVCSEGKQVRAETVGAINYWSTVGMVQKAGSVIFAFSYPHAIVHAYIGLTPRTTKAWKIVVTGAMSAGAFMCLCMG 268
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Match: A0A7S2V5U5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5U5_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.490e-27 Identity = 77/243 (31.69%), Postives = 127/243 (52.26%), Query Frame = 1 Query: 16 TMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEAAEQSPFTDTSPVAKHDYTSLAGATYGAAGRTAVDSTIVVGNLGATISYLVVIADLTSDLLENWLDY-DGWAVSLYVTCPAMVLLFVLGPCLMRHFSDLIWLAALSITAISGASCLVVFWGRAYAISEGVPRSTLRWLDCKAMFEKLGSVVFALGCASAAFHAYLSMEPRSLPVWRDTTAQSVVLGSGACYIIG 741 T+IL++N MIG GILNQP VF +AGI A +LY+ A W+G ++V+A + V + D +++ G YG G D I V G ++Y+VVI+ D+L + + D W ++ + P +VLLF + CL RHF L+ ++ +S+ +I LV+ +G + M + GSVVFA+ + +F A+ S+E ++ W +A++ +G+ C+I G Sbjct: 68 TVILLINTMIGAGILNQPYVFSKAGILGACVLYVLALGTVWLGANLVVQAGRK--------VDQMDLSAVGGYCYGILGCGLTDFMIAVATFGGLLAYMVVISGEVVDMLSDIPNSEDQWWTNISILLPVIVLLFCVPTCLTRHFGHLVLVSTISVFSICCVMALVIVYGP--IAGREYQHERILIFSLTGMLTECGSVVFAVTYITGSFFAFNSLELKNQARWPIVSAKASCMGTFMCFITG 300 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig122.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig122.2.1 >prot_P-wetherbeei_contig122.2.1 ID=prot_P-wetherbeei_contig122.2.1|Name=mRNA_P-wetherbeei_contig122.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=244bp MTMILVLNYMIGTGILNQPQVFKEAGIAAATLLYMTAGVATWVGLVVLVEback to top mRNA from alignment at P-wetherbeei_contig122:12396..13743+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig122.2.1 ID=mRNA_P-wetherbeei_contig122.2.1|Name=mRNA_P-wetherbeei_contig122.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1348bp|location=Sequence derived from alignment at P-wetherbeei_contig122:12396..13743+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig122:12396..13743+ >mRNA_P-wetherbeei_contig122.2.1 ID=mRNA_P-wetherbeei_contig122.2.1|Name=mRNA_P-wetherbeei_contig122.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=732bp|location=Sequence derived from alignment at P-wetherbeei_contig122:12396..13743+ (Phaeothamnion wetherbeei SAG_119_79)back to top |