mRNA_P-wetherbeei_contig12194.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Match: A0A835YRA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA6_9STRA) HSP 1 Score: 118 bits (296), Expect = 4.930e-27 Identity = 96/299 (32.11%), Postives = 137/299 (45.82%), Query Frame = 1 Query: 1 WQSLVDIGDVYALGGYPRFLPNEALALNCYRTACQCPDPTVAGLAQSKFVTLRLQKIHEIDRSGTHLPEGYGVEACKLAKELLRQMPYMSFNK--PRSSLARLN----LHRHHRAPVQALAQAP------------VQVPPIARVRR------------VPRLDTQNVHDHSIVSAVRVNIDALNARNTIVLNTKACNRALEQVRHAILSCNPKELNGQQKGDALLVLDKLSDSTHTGYNVSDLETLALVWNEISKHDQQAA---LTETLCKQLASGVENGFVVCLSGRISRIVSALDG 798 W ++V+ D+YA G +PR+ P+ ALAL Y A D VAG AQS+FV+ RL + +D G LP YG C A+++ R Y P S + + + P+ A+ + P V +P AR RR RLDTQNVHDHS+++A + N+ L A + + + V I C+ E N DAL VL LS H+ VS+ + LA VW +I + TL +L VE+ VC +GR+ R++S LDG Sbjct: 68 WNAMVEAADIYARGAFPRYCPSVALALTMYALAAASADAEVAGQAQSQFVSTRLHPVAGVDVMGPPLPACYGERMCAAARDMNRADTYCRRRPVPPPSPVVAVREAPVVGEAQVVPIPAVRELPAAAAPPRXXXXRVPIPTAARARRNGRPRRRAAERPCIRLDTQNVHDHSVIAASKSNLARLVAEHGDI-------ELMPDVFVQI--CDLAEGNA----DALSVLKVLSMDEHSTVGVSERQALAHVWTKIIAIRDDTIRENVKGTLILRLGECVEHSLPVCSTGRMVRMLSTLDG 353
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Match: A0A835YIY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIY3_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.150e-20 Identity = 82/266 (30.83%), Postives = 121/266 (45.49%), Query Frame = 1 Query: 73 LALNCYRTACQCPDPTVAGLAQSKFVTLRLQKIHEIDRSGTHLPEGYGVEACKLAKELLRQMPYMSFNKPRSSLARLNLHRHHRAPVQALAQAPVQVP-PIARVRRVPRL---------------DTQNVHDHSIVSAVRVNIDALNARNTIVLNTKACNRALEQVRHAILSCNPK---ELNGQQKGD--ALLVLDKLSDSTHTGYNVSDLETLALVWNEIS-KHDQ--QAALTETLCKQLASGVENGFVVCLSGRISRIVSALDG 798 +AL Y A +C D VAG QS+++ RL + +D +G H+ Y A++L +MP +PRS + P + Q + PIA+ R V R+ DTQNVHDHS+V+A + N+ A +H L P E+ G+ AL +L LS++ HT VS+ + LA VW IS K D+ Q + ETL ++L +E+ VC +GR RI++ LDG Sbjct: 1 MALMLYGIAAECGDAEVAGKGQSEYIATRLNPVSGVDTAGVHIHTCYCDLMLSTARKLRAEMPCQ--RRPRSQTRQPPAKDMPAVPAPPVEQGTRTLEAPIAQARVVQRVVWRASPAARPATRIVDTQNVHDHSVVAASKTNV------------------AQMIKKHGDLELTPDVLLEVRNLAAGNTNALAILTNLSNAKHTTLGVSEKQALAHVWRTISDKTDETLQTNMKETLTQRLGECIEHDLPVCSTGRFVRILATLDG 246
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Match: A0A250XJZ3_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XJZ3_9CHLO) HSP 1 Score: 99.0 bits (245), Expect = 1.090e-19 Identity = 78/247 (31.58%), Postives = 124/247 (50.20%), Query Frame = 1 Query: 112 DPTVAGLAQSKFVTLRLQKIHEIDRS-GTHLPEGYGVEACKLAKELLRQMPYMSFNKPRSSLARLNLHRHHRAPVQALAQAPVQVPPIARVR-RVP--RLDTQNVHDHSIVSAVRVNIDALNARNTIVLNTKACNRALEQVRHAILSCNPKELNGQQKGDALLVLDKLSDSTHTGYNVSDLETLALVWNEISKHDQQAA---LTETLCKQLASGVENGFVVCLSGRISRIVSALDGTGL-LTDAVPM 828 D AG+AQ K + L+ + D + G A +++ MP SF++P +A P + VR +VP + D QNVHDH +V N+D + + ++ N A+ QV ++L +++ ++ +A+ VLD LS + HT + S+ +TLA VW+ I + D + L E L KQLA+GVE+G VVC +G+I+RI S+L+G+GL LT P+ Sbjct: 4 DGASAGIAQMKRLELKYSPMSRDDEEHALDIDPRIGSAVYHHAMDVVGGMPMSSFSRP---------------VFPGIASDAETPPKVKEVRVQVPQYKTDAQNVHDHGVVQTTAKNLDLIPSDPR-----RSSNDAIAQVMDSVLK---SDMSVCERENAIRVLDSLSTNVHTKFGRSEAKTLADVWDVIRRSDTEQLRKNLEENLVKQLATGVEDGSVVCSTGKIARITSSLEGSGLGLTTMRPL 227
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Match: A0A2P0VMR2_9PHYC (Uncharacterized protein n=1 Tax=Tetraselmis virus 1 TaxID=2060617 RepID=A0A2P0VMR2_9PHYC) HSP 1 Score: 89.7 bits (221), Expect = 1.340e-16 Identity = 49/144 (34.03%), Postives = 81/144 (56.25%), Query Frame = 1 Query: 400 DTQNVHDHSIVSAVRVNIDALNARNTIVLNTKACNRALEQVRHAILSCNPKELNGQQKGDALLVLDKLSDSTHTGYNVSDLETLALVWNEISKHDQQAA---LTETLCKQLASGVENGFVVCLSGRISRIVSALDGTGLLTDAV 822 D QN HDH + +A + I + + + C+R +E++ +L+ + + +K DAL V++ L TH+ YN S+ + A++ ++I K + +TL KQ+ASGVE G VVC SG+I R++S DGTG+ + V Sbjct: 320 DAQNSHDHGVTAAFKKQISEMANETETIPESYNCDRHMEKIVDTVLN---SDSSPDEKNDALQVIENLGSRTHSTYNFSERQIAAMIIDKIDKIADPVLKRNVKDTLVKQMASGVEYGKVVCSSGKIGRLMSTFDGTGMFENKV 460
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Match: B5LWL2_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL2_9PHYC) HSP 1 Score: 64.3 bits (155), Expect = 3.240e-8 Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 400 DTQNVHDHSIVSAVRVNIDALNARNTIVLNTKACNRALEQVRHAILSCNPKELNGQQKGDALLVLDKLS--------DSTHTGYNVSDLETLALVWN--EISKHDQQAALTETLCKQLASGVENGFVVCLSGRISRIVSALDGT 801 D+QN HDH +V+A+ N+ L +++ A E V A+ C L + L VL +S D+ T NV D+ ++W ++ D ++ + ETL K+LASGVE VVC +GR+ RI+S +GT Sbjct: 100 DSQNSHDHGVVTALVQNLKKLGI--DFKSSSREFREADEVVAEAVEFCTSMSLPDEDVNKILRVLHSISQTDPSRFRDTDFTQINVLDM----VLWKIATVNPDDVRSNMRETLLKRLASGVEGDSVVCGTGRMGRILSVFEGT 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12194.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12194.1.1 >prot_P-wetherbeei_contig12194.1.1 ID=prot_P-wetherbeei_contig12194.1.1|Name=mRNA_P-wetherbeei_contig12194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp WQSLVDIGDVYALGGYPRFLPNEALALNCYRTACQCPDPTVAGLAQSKFVback to top mRNA from alignment at P-wetherbeei_contig12194:1204..2031+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12194.1.1 ID=mRNA_P-wetherbeei_contig12194.1.1|Name=mRNA_P-wetherbeei_contig12194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig12194:1204..2031+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12194:1204..2031+ >mRNA_P-wetherbeei_contig12194.1.1 ID=mRNA_P-wetherbeei_contig12194.1.1|Name=mRNA_P-wetherbeei_contig12194.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig12194:1204..2031+ (Phaeothamnion wetherbeei SAG_119_79)back to top |