mRNA_P-wetherbeei_contig12192.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A847JSW2_9BACT (AAA family ATPase n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JSW2_9BACT) HSP 1 Score: 149 bits (375), Expect = 4.780e-41 Identity = 70/115 (60.87%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IE+I I+N++ F++AT SD+P +C++VG NG GKST+FDVFSFLKDAL NV A+ RRGGF E+V+RG+ GPI + +KFRESGGRLATY L++ +G R VV E+LKFRRG Sbjct: 1 MQIEAIEIRNYRLFKNATFSDLPKLCVIVGANGSGKSTLFDVFSFLKDALTQNVGAAVARRGGFRELVSRGERGPIGITIKFRESGGRLATYQLEIADDGGRPVVHREILKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A846T377_9CYAN (AAA family ATPase n=1 Tax=Synechococcaceae cyanobacterium SM1_2_3 TaxID=2720456 RepID=A0A846T377_9CYAN) HSP 1 Score: 146 bits (368), Expect = 5.180e-40 Identity = 70/115 (60.87%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IESI I+N++ FQ+A L ++P + +L+G NG GKST+FDVFSFLKDAL NV+KA+++RGGF E+++RG SGPI L KFRE+GGRLATY L + S+G + VV EVLKFRRG Sbjct: 1 MQIESIEIRNYRVFQNAVLKNLPKLTVLIGANGVGKSTLFDVFSFLKDALTHNVSKAVSKRGGFRELISRGASGPITLTFKFRETGGRLATYELAIASDGGKPVVEREVLKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A1V5VGN0_9BACT (ATPase_AAA_core domain-containing protein n=1 Tax=bacterium ADurb.Bin236 TaxID=1866925 RepID=A0A1V5VGN0_9BACT) HSP 1 Score: 146 bits (368), Expect = 5.280e-40 Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 +HIESI I+N++ F++A ++DIPS+C+LVG NG GKST+FDVF FL+DAL NV KAL RGGF+EV++R GP+ E+KFRE G L TYSL +G + R VV SEVLK+RRG Sbjct: 1 MHIESISIRNYRVFREANMTDIPSMCVLVGANGTGKSTMFDVFGFLRDALTHNVDKALAMRGGFNEVISRNAEGPVSFEIKFREVNGPLVTYSLSIGLDSGRPVVASEVLKYRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: UPI001C48E58D (AAA family ATPase n=1 Tax=Elioraea tepida TaxID=2843330 RepID=UPI001C48E58D) HSP 1 Score: 145 bits (365), Expect = 1.440e-39 Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IE+I I+N++ F+ A L D+P +C++VG NG GKST+FDVFSFLKDAL NV A+ RRGGF E V+RGQ GPI +E+KFRESGGRLATY L+V G R VV E+LKFRRG Sbjct: 1 MQIETIAIENYRLFRQAILRDLPRMCVVVGANGSGKSTLFDVFSFLKDALTQNVGTAVARRGGFHEPVSRGQPGPIRIELKFRESGGRLATYELQVAVAGGRPVVHREILKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: UPI00047616A1 (AAA family ATPase n=1 Tax=Lamprocystis purpurea TaxID=61598 RepID=UPI00047616A1) HSP 1 Score: 144 bits (363), Expect = 2.840e-39 Identity = 71/115 (61.74%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IESI I N++ F+ A LSD+P + ++VG NG GKST+FDVFSFLK++L NV A+ RRGG+ E+V+RG++GPIE+ VKFRESGGRLATY L V +G R VV EVLKFRRG Sbjct: 1 MQIESIEINNYRLFRHAVLSDLPRMSVVVGANGSGKSTLFDVFSFLKESLTQNVASAVARRGGYRELVSRGETGPIEIVVKFRESGGRLATYQLAVAEDGGRPVVHREVLKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A7V4IG69_9BACT (Chromosome segregation protein SMC n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7V4IG69_9BACT) HSP 1 Score: 142 bits (359), Expect = 1.100e-38 Identity = 68/113 (60.18%), Postives = 88/113 (77.88%), Query Frame = 1 Query: 22 IESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 IESI IKN++ F+ A + D+P +VG+NG GKS++FDVFSF+KDAL NV+KA+N+RGGF E+V+RG GPIE+ +KFRESGG+LATY L + +E VV EVLKFRRG Sbjct: 3 IESIEIKNYRMFKHAAMQDLPRFATVVGENGSGKSSLFDVFSFMKDALQLNVSKAVNKRGGFRELVSRGALGPIEISIKFRESGGKLATYHLAIAAENGSSVVQREVLKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A484HI78_9DELT (DNA replication and repair protein RecF n=1 Tax=uncultured Desulfobacteraceae bacterium TaxID=218296 RepID=A0A484HI78_9DELT) HSP 1 Score: 142 bits (358), Expect = 1.550e-38 Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IESI I+N++ F+ A ++P + L+VG NG GKST+FDVFSFLKDALA NV A+ RRGGF E+V+R + GPI + VKFRESGGRLATY L VG +GAR VV E+LKFRRG Sbjct: 1 MQIESIEIRNYRLFRRAKFKNLPRLTLVVGANGSGKSTLFDVFSFLKDALAQNVGVAVARRGGFRELVSRSEKGPIGITVKFRESGGRLATYQLDVGEDGARPVVDREILKFRRG 115
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: UPI001C9A20E8 (AAA family ATPase n=2 Tax=unclassified Methylosinus TaxID=2624500 RepID=UPI001C9A20E8) HSP 1 Score: 142 bits (358), Expect = 1.700e-38 Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 1 MSLKSLHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 M + + IES+ I+N++ F D SD+ + ++VG NG GKST+FDVFSFLK+AL NV A+ RRGGF+E+V+RG+ GPI + VKFRESGGRLATY L++ ++G R VV E+LKFRRG Sbjct: 1 MMSQPMQIESLEIRNYRLFNDMKFSDLARLTVVVGANGSGKSTLFDVFSFLKEALTQNVATAVTRRGGFNELVSRGEKGPIGITVKFRESGGRLATYDLQIAADGGRAVVEREILKFRRG 120
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: Q2LQ15_SYNAS (ATPase n=2 Tax=Syntrophus TaxID=43773 RepID=Q2LQ15_SYNAS) HSP 1 Score: 142 bits (358), Expect = 1.730e-38 Identity = 70/120 (58.33%), Postives = 91/120 (75.83%), Query Frame = 1 Query: 1 MSLKSLHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 M ++ + IESI I+N++ F+ A+L+ + + + VG+NG GKST+FDVFSFLKD+LA N KA+ RRGGF E+V+RG GPI + +KFRE+GGRLATY L V EG R VV EVLKFRRG Sbjct: 4 MQIQGMQIESIDIQNYRLFKQASLNKLSRLAVFVGENGAGKSTIFDVFSFLKDSLAQNAAKAVARRGGFKELVSRGTEGPISITLKFRETGGRLATYELSVAFEGGRVVVDREVLKFRRG 123
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Match: A0A518CV79_9BACT (Recombination protein F n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CV79_9BACT) HSP 1 Score: 141 bits (356), Expect = 3.060e-38 Identity = 68/115 (59.13%), Postives = 91/115 (79.13%), Query Frame = 1 Query: 16 LHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFLKDALATNVTKALNRRGGFSEVVTRGQSGPIELEVKFRESGGRLATYSLKVGSEGARGVVLSEVLKFRRG 360 + IES+ I+N++ F++A L D+P + ++VG NG GKST+FDVF+FLK+AL NV A+ RRGGF E+V+RG++GPIE+ VKFRESGG+LATY L+V + R VV EVLKFRRG Sbjct: 1 MQIESLEIRNYRLFREAVLRDLPRMTVVVGANGSGKSTLFDVFTFLKEALTQNVATAVARRGGFRELVSRGENGPIEIVVKFRESGGKLATYQLEVAEDAGRPVVHREVLKFRRG 115 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12192.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12192.1.1 >prot_P-wetherbeei_contig12192.1.1 ID=prot_P-wetherbeei_contig12192.1.1|Name=mRNA_P-wetherbeei_contig12192.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp MSLKSLHIESIRIKNFKSFQDATLSDIPSVCLLVGKNGCGKSTVFDVFSFback to top mRNA from alignment at P-wetherbeei_contig12192:3..362- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12192.1.1 ID=mRNA_P-wetherbeei_contig12192.1.1|Name=mRNA_P-wetherbeei_contig12192.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig12192:3..362- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12192:3..362- >mRNA_P-wetherbeei_contig12192.1.1 ID=mRNA_P-wetherbeei_contig12192.1.1|Name=mRNA_P-wetherbeei_contig12192.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig12192:3..362- (Phaeothamnion wetherbeei SAG_119_79)back to top |