mRNA_P-wetherbeei_contig12188.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: D8LT48_ECTSI (UPF0020 domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT48_ECTSI) HSP 1 Score: 159 bits (401), Expect = 4.730e-43 Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 1 LEVYDAIVCDPPYGLRAGARKSGAAKPNAHPIRNRETF--IPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +E+YD IV DPPYG+RAGARKSG + A ++ E F +P TQ YPV DVLVDLL+VA ++LV+ GRLCYLL STW+FD++ DLPRHPCL L HHS+QGL+Q +CRR+ITM KT YD Sbjct: 291 MELYDCIVTDPPYGIRAGARKSGR-EGEARTVKPEERFDHMPHTQHYPVEDVLVDLLEVAAQTLVLGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYD 409
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A6H5JUH8_9PHAE (UPF0020 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH8_9PHAE) HSP 1 Score: 155 bits (393), Expect = 3.000e-42 Identity = 75/120 (62.50%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 1 LEVYDAIVCDPPYGLRAGARKSGAAKPNAHPIRNRETF--IPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +E+YD IV DPPYG+RAGARKSG + A ++ E F +P TQ YPV DVLVDLL+VA ++L + GRLCYLL STW+FD++ DLPRHPCL L HHS+QGL+Q +CRR+ITM KT YD Sbjct: 291 MELYDCIVTDPPYGIRAGARKSGR-EGEARIVKPDERFDHMPHTQHYPVEDVLVDLLEVAAQTLALGGRLCYLLASTWEFDLQRDLPRHPCLELSHHSMQGLTQLLCRRLITMTKTCRYD 409
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A1Z5KIU2_FISSO (tRNA (Guanine10-N2)-methyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIU2_FISSO) HSP 1 Score: 141 bits (356), Expect = 3.360e-37 Identity = 68/120 (56.67%), Postives = 85/120 (70.83%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPIRN--RETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYDAA 360 +YDAI+CDPPYG+RAGARKSG+ N P+ R I QT+ YPV DV+ DLLDVA R+LV+ GRL Y++PS DFD E DLPRH CLR++H Q L ++ RRM+TMEK YD + Sbjct: 373 MYDAIICDPPYGIRAGARKSGSRLTNPKPVPEDQRHDHIAQTRPYPVSDVMADLLDVAARNLVLGGRLVYIIPSYADFDDECDLPRHECLRIVHICYQPLGSELGRRMVTMEKIGEYDVS 492
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A836CPF8_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPF8_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.300e-34 Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPIR--NRETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYDAA 360 ++D IV DPPYG+RAGAR++G+ + N P+R R +P T+ Y V DVLVDLLDVA R+L RLCYL+P T++ LP HPCLRL+ HSVQGL++ CRR++TM K YD A Sbjct: 294 LFDGIVTDPPYGIRAGARRTGSRRANVTPVRPEQRADHVPMTRPYAVEDVLVDLLDVAARALRRGRRLCYLMPGTYETCTRASLPGHPCLRLVAHSVQGLTKTTCRRLVTMVKVAEYDPA 413
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A7S3PUT2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUT2_9STRA) HSP 1 Score: 133 bits (335), Expect = 2.800e-34 Identity = 63/118 (53.39%), Postives = 81/118 (68.64%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPIR--NRETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +YDAI+ DPPYG+RAGARKSG+ P++ +R I QT+ Y V DV+ DLLDV+ R+LV+ GRL Y++PS DFD+ETDLP H C RL+H Q L + RR +TMEK YD Sbjct: 357 MYDAIITDPPYGIRAGARKSGSKLDKPRPVKEEDRHDHIAQTKVYAVSDVMADLLDVSARNLVMGGRLVYVIPSMTDFDVETDLPNHACFRLVHVCYQPLQSNLGRRTVTMEKVGEYD 474
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A448ZQV7_9STRA (UPF0020 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQV7_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.880e-34 Identity = 66/118 (55.93%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPI--RNRETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +YDAI+CDPPYG+RAGAR++G+ N PI NR I QT+ Y V DV+ DLLDVA R+LVV GRL Y++PS DFD E DLPRH CL L+H Q S ++ RR++ MEK YD Sbjct: 455 LYDAILCDPPYGIRAGARQTGSRLENPRPILEENRHDHIAQTKPYVVSDVMSDLLDVAARTLVVGGRLVYVIPSFRDFDEERDLPRHDCLELVHTCYQPFSTELGRRIVAMEKVSDYD 572
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A7S0GLP5_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GLP5_9STRA) HSP 1 Score: 127 bits (319), Expect = 4.850e-34 Identity = 66/121 (54.55%), Postives = 83/121 (68.60%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPIRN-----RETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPS-TWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAY 351 +YDAI+CDPPYG+RAGARKSG + N H I++ I QT YPV DV+ DLLDVA ++LV+ GRL Y++PS ++ F+IETDLPRH CL L H Q L RRM+TM KT+ Y Sbjct: 45 MYDAIICDPPYGIRAGARKSGCGE-NTHRIKHITDTXXXXXIAQTTVYPVSDVMADLLDVAAQTLVLHGRLVYIIPSLSYGFNIETDLPRHACLTLEHVCFQPLQTHFGRRMVTMIKTKEY 164
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A7S4QDS7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QDS7_9STRA) HSP 1 Score: 132 bits (332), Expect = 7.260e-34 Identity = 63/118 (53.39%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPIRNRETF--IPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +YDAIV DPPYG+RAGARKSG+ N P+ + I QT+ Y V DV+ DLLDVA R+LV+ GRLCY++PS DFD + DLPRH CL+L+H Q L ++ RR++ MEK Y+ Sbjct: 340 LYDAIVTDPPYGIRAGARKSGSRLENPRPVEEEHRYDHIAQTKPYAVSDVMSDLLDVAARTLVMGGRLCYVIPSMTDFDEQVDLPRHECLKLVHVCYQPLQMELGRRIVAMEKIADYN 457
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A7S0UL30_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UL30_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.290e-33 Identity = 62/120 (51.67%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPI--RNRETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYDAA 360 +YDAIVCDPPYG+RAGAR++G+ P+ NR I QT+ Y V DV+ DLLDVA +L V GRL Y++PS +FD E DLPRH CL LIH Q S ++ RR++ M+K YD + Sbjct: 51 LYDAIVCDPPYGIRAGARQTGSKLNKPRPVLEENRHDHIAQTKAYAVSDVMSDLLDVAASTLKVGGRLVYIIPSFQNFDEERDLPRHECLELIHTCYQPFSLELGRRIVAMKKIADYDVS 170
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Match: A0A6V0BUF4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0BUF4_9STRA) HSP 1 Score: 131 bits (330), Expect = 3.420e-33 Identity = 65/118 (55.08%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 7 VYDAIVCDPPYGLRAGARKSGAAKPNAHPI--RNRETFIPQTQTYPVGDVLVDLLDVAGRSLVVRGRLCYLLPSTWDFDIETDLPRHPCLRLIHHSVQGLSQKICRRMITMEKTQAYD 354 +YDAI+CDPPYG+RAGARK+G+ I NR T IPQT+ Y V DV+ DLLDVA R+LV+ GRL Y++PS DFD + DLPRH CL LIH Q S ++ RR++ M+K YD Sbjct: 530 LYDAILCDPPYGIRAGARKTGSKLDQPRQILEENRHTHIPQTKPYVVSDVMSDLLDVAARTLVLGGRLVYVIPSFRDFDDDRDLPRHDCLELIHVCYQPFSNELGRRIVAMKKITDYD 647 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12188.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12188.1.1 >prot_P-wetherbeei_contig12188.1.1 ID=prot_P-wetherbeei_contig12188.1.1|Name=mRNA_P-wetherbeei_contig12188.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp LEVYDAIVCDPPYGLRAGARKSGAAKPNAHPIRNRETFIPQTQTYPVGDVback to top mRNA from alignment at P-wetherbeei_contig12188:371..1661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12188.1.1 ID=mRNA_P-wetherbeei_contig12188.1.1|Name=mRNA_P-wetherbeei_contig12188.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1291bp|location=Sequence derived from alignment at P-wetherbeei_contig12188:371..1661- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12188:371..1661- >mRNA_P-wetherbeei_contig12188.1.1 ID=mRNA_P-wetherbeei_contig12188.1.1|Name=mRNA_P-wetherbeei_contig12188.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig12188:371..1661- (Phaeothamnion wetherbeei SAG_119_79)back to top |