mRNA_P-wetherbeei_contig12187.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12187.3.1
Unique NamemRNA_P-wetherbeei_contig12187.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A1H8XGG7_9PROT (NADH-quinone oxidoreductase subunit H n=14 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8XGG7_9PROT)

HSP 1 Score: 616 bits (1589), Expect = 5.560e-218
Identity = 310/329 (94.22%), Postives = 323/329 (98.18%), Query Frame = 1
Query:  727 AIVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVPKL 1713
            AIVILAQCLAVT+PLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQP ADGLKL+LKETIVPSSAN +LFIIAPMI F+TALVAWAVVPFDDGWVIA+INVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLS VVLAQSG F++WF+LPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGA+LFLGGWMSPIPYAPFT+VPG+VWFA KIAFLLF+FSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVV+TAAVLQFGGWVPKL
Sbjct:   17 AIVILAQCLAVTIPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPMADGLKLLLKETIVPSSANGVLFIIAPMIAFMTALVAWAVVPFDDGWVIADINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSKVVLAQSGWFFNWFWLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAVLFLGGWMSPIPYAPFTWVPGIVWFAFKIAFLLFIFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVITAAVLQFGGWVPKL 345          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: UPI0005F4B2C1 (NADH-ubiquinone oxidoreductase 75 kDa subunit-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F4B2C1)

HSP 1 Score: 634 bits (1634), Expect = 4.390e-216
Identity = 328/570 (57.54%), Postives = 417/570 (73.16%), Query Frame = 1
Query:    1 YPVARLGAGPATLRELVDGKLGFSEKLKTAKHPLIVVGMGALAREDGAAILALARDLAEKLNAVRADWNGFAVLHTTAARVGGLDLGLVPGDGGRDVEGILAGCEKREIELVYLLAADEIDTKRLGKAFVVYQGHHGDVGAHRADVVLPGAAYTEKPGTYVNTEGRVQLGQRAGYPPGDAREDWAILRALSERLGKTLPYDTLDQVRARLVAVNKTFAAIDQQTAGTWGVFGKAG-TLTDQPFAIVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVP 1707
            Y V +LG  P  L ++ +G   F E L  A++P++++G  AL R+D  +IL LA  +AEK N VR DWNGF +LH  AARVGGLD+G VP  GG+D   IL   E  +IE++YLL ADEIDT +L   FV+YQGHHGD GAH ADV+LPGAAYTEK  TYVNTEGRVQ    A +PPG+A+EDW I++ LS+ L  +LPYD+L  VR +L  +   F   DQ    TW      G +L++ PF +      L + VPLL++VAY+ Y +RKV  +IQLR GP+VVGPFGLLQPFAD +KL++KE I+P  A+ ILFI+APM+TFI AL+AWAV+PF    VIANINVG+LY+ AISSLGVYG+IIAGW+SNS YAFLGA+RSAAQM+SYEVSIG ++ TV++  G+LNL ++V+A+      W  L L+P+ +IFF+S LAETNR PFDLP +EAELV+G++ EYS+M F LFFLGEYANMIL SA+  I FLGGW   + ++    +PG++WF LKI  LLFVF W + T+PRYRYDQLMRLGWKVFLP+S+ WVVL + VL F G +P
Sbjct:  362 YHVEKLGDNPDVLSKIANGNHKFCELLVAAQNPMLIIGQDALIRDDSESILILAGKIAEKFNMVRDDWNGFNMLHKAAARVGGLDVGFVPEKGGKDTNQILEHTEGGKIEVIYLLGADEIDTSKLENTFVIYQGHHGDKGAHVADVILPGAAYTEKYATYVNTEGRVQRTNLAVFPPGEAKEDWLIIKNLSQYLDLSLPYDSLFDVRKKLDTIGPQFRNADQVVKNTWVPISNDGISLSNTPFTLKEF-NILFILVPLLLSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLIKEPIIPFRASTILFIMAPMLTFILALIAWAVIPFVIPKVIANINVGVLYVLAISSLGVYGVIIAGWSSNSNYAFLGAIRSAAQMISYEVSIGLIVATVVVTTGTLNLGEMVVAKHN-MPFWVDLLLMPIGIIFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILASAMMTIFFLGGWYPLLEFSLLYKIPGLIWFILKIVILLFVFIWIRATIPRYRYDQLMRLGWKVFLPISVLWVVLISGVLLFTGNLP 929          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A537MZB5_9PROT (NADH-quinone oxidoreductase subunit H n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537MZB5_9PROT)

HSP 1 Score: 608 bits (1569), Expect = 6.090e-215
Identity = 301/328 (91.77%), Postives = 321/328 (97.87%), Query Frame = 1
Query:  727 AIVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVPK 1710
            AI+IL +CLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETI+PSSAN++LFIIAPMITF+TALVAWAVVPF+DGWVIA+INVGILYLFAISSLGVYGII+ GWASNSKY FLG+LRSAAQMVSYEVSIGFV+ITVLLCVGSLNLS VV+AQ+G FW+WF+LPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSA+GA+LFLGGWMSPIPYAPFT+VPG++WF LKIA LLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVPK
Sbjct:   17 AILILLECLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIIPSSANSVLFIIAPMITFVTALVAWAVVPFNDGWVIADINVGILYLFAISSLGVYGIIMGGWASNSKYPFLGSLRSAAQMVSYEVSIGFVIITVLLCVGSLNLSQVVIAQAGWFWNWFWLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSAMGAVLFLGGWMSPIPYAPFTWVPGIIWFCLKIAMLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVPK 344          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A1T4KWQ6_9HYPH (NADH-quinone oxidoreductase subunit H n=2 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4KWQ6_9HYPH)

HSP 1 Score: 594 bits (1532), Expect = 2.550e-209
Identity = 295/327 (90.21%), Postives = 316/327 (96.64%), Query Frame = 1
Query:  727 AIVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVP 1707
            AIVILA+CLAVTVPLLVAVAYMTY DRK+WASIQLRRGPNVVGPFGLLQPFADGLKL+LKETIVPSSAN +LF+IAPMITF+TAL++WAVVPF DGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVL+TVLLCVGSLNLS VVLAQ+G FW+W++LPLLPMFVIFF+SALAETNRTPFDLPMSEAELV GF TEYS+M F LFFLGEYANMILLSA+G++LFLGGWMSPIPYAPFTY+PGVVWFALKIA LLFVFSWTKGTLPRYRYDQLMRLGWKVFLP+SLGW+VLTAAVLQFGG VP
Sbjct:   17 AIVILAECLAVTVPLLVAVAYMTYADRKIWASIQLRRGPNVVGPFGLLQPFADGLKLLLKETIVPSSANTVLFLIAPMITFMTALISWAVVPFSDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLVTVLLCVGSLNLSKVVLAQAGWFWNWYWLPLLPMFVIFFISALAETNRTPFDLPMSEAELVQGFQTEYSSMPFALFFLGEYANMILLSAMGSVLFLGGWMSPIPYAPFTYIPGVVWFALKIASLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPISLGWLVLTAAVLQFGGLVP 343          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A5C8PPB8_9HYPH (NADH-quinone oxidoreductase subunit H n=4 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PPB8_9HYPH)

HSP 1 Score: 578 bits (1490), Expect = 4.230e-203
Identity = 282/323 (87.31%), Postives = 310/323 (95.98%), Query Frame = 1
Query:  730 IVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGG 1698
            IVI+AQCLA+TVPLLVAVAYMTYVDRKVWA+IQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPS AN +LF++APMITF TAL+AWAVVPFDDGWV+A++NVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVL+TVLLC GSLNLSD+V AQ+GGFW+W++LPLLPMFV+FF+SALAETNRTPFDLPMSEAELVAGFHTEYSAM FGLFFLGEYANMILLS +GA+LFLGGW SP+P+APFT+VPG+VWFALKIA LLFVFSWTKGT+PRYRYDQLMRLGWK+FLP SL W+VLTAA +QF G
Sbjct:   13 IVIVAQCLAITVPLLVAVAYMTYVDRKVWAAIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSGANKVLFVLAPMITFATALIAWAVVPFDDGWVLADVNVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLVTVLLCAGSLNLSDIVKAQAGGFWNWYWLPLLPMFVVFFISALAETNRTPFDLPMSEAELVAGFHTEYSAMAFGLFFLGEYANMILLSGMGAVLFLGGWYSPLPFAPFTWVPGLVWFALKIAVLLFVFSWTKGTVPRYRYDQLMRLGWKIFLPFSLLWLVLTAAAIQFLG 335          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A812UZ38_SYMMI (Ndufs1 protein n=5 Tax=Eukaryota TaxID=2759 RepID=A0A812UZ38_SYMMI)

HSP 1 Score: 634 bits (1634), Expect = 9.930e-201
Identity = 333/592 (56.25%), Postives = 413/592 (69.76%), Query Frame = 1
Query:    1 YPVARLGAGPATLRELVDGKLGFSEKLKTAKHPLIVVGMGALAREDGAAILALARDLAEKLNAVRADWNG--FAVLHTTAARVGGLDLGLVPGDGGRDVEGILAGCEKREIELVYLLAADEIDTKRLGKAFVVYQGHHGDVGAHRADVVLPGAAYTEKPGTYVNTEGRVQLGQRAGYPPGDAREDWAILRALSERLGKTLPYDTLDQVRARLVAVNKTFAAIDQQTAGTWGVFGKAGTLTDQPFAIVI---------------LAQC-------------LAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVL 1686
            Y    LGAGP TL E+ +G   F++ LK A++P+I++G GALAREDGAA+L LA  +A        D NG  F +LHT A+RV GLDLGLVPG+GG+D + ILA  +   +++V+ L +DEID    G AFV+Y G HGD GAHRADV+LPGAAYTEK GTYVNTEGRVQ+GQRA +PPGDAREDW ILRALS  +G  LPYD L+ +RA ++A     A  D  T   W      G  + +PF   I               +A+C             LA+   LL+ V Y  Y DRK+WA++ +RRGPNVVGP+GL Q FAD  K +LKE I+P+ AN  +F+IAP +TF  AL+ WAVVP   G V+A+INVGILY+FA+SSLGVYG+I+AGWASNSKY FLG LRSAAQMVSYEVSIGFV++TVL+CVGSLNL+D+V AQ      WFF+PL PMFV+FF+SALAETNR PFDLP +E+ELVAG+  EYS+M F +F +GEY  ++L+ AL   LF GGW+ P   AP   +PG +WF LK+ F  F+F+  K  +PRYRYDQLMRLGWKVFLP SL WVV+T  VL
Sbjct: 1367 YSYDYLGAGPDTLTEVANGSHSFAQVLKDAENPMIIIGQGALAREDGAAVLGLAGKIA--------DGNGASFNMLHTAASRVAGLDLGLVPGEGGKDRDAILAAAKDGSVKVVFNLGSDEIDGAEFGDAFVIYLGTHGDRGAHRADVILPGAAYTEKSGTYVNTEGRVQVGQRAIFPPGDAREDWTILRALSAVIGDALPYDNLNDLRAAMIADAPVLAETDDLTETAWTSIPDGGAASSEPFQSPIADFYLTNPVARASKTMAECSAEIVKRASALGALALIGVLLIYVIYAVYGDRKIWAAVHIRRGPNVVGPWGLFQIFADAGKNMLKEAIIPAGANKGVFLIAPFLTFTLALIGWAVVPVGAGLVVADINVGILYIFAMSSLGVYGVIMAGWASNSKYPFLGGLRSAAQMVSYEVSIGFVIVTVLMCVGSLNLTDIVNAQKD---MWFFIPLFPMFVVFFISALAETNRPPFDLPEAESELVAGYQVEYSSMPFLMFMIGEYIAIVLMCALLTTLFFGGWLPPFDIAPLNLIPGPIWFILKVTFFFFLFAMVKVIVPRYRYDQLMRLGWKVFLPFSLLWVVVTGGVL 1947          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A2E7HE84_9PROT (NADH-quinone oxidoreductase subunit H n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7HE84_9PROT)

HSP 1 Score: 491 bits (1264), Expect = 1.060e-168
Identity = 241/331 (72.81%), Postives = 284/331 (85.80%), Query Frame = 1
Query:  730 IVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDG----WVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSG-GFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVP 1707
            ++I+   LA+ +P+L++VAY+TY +RKV A++QLRRGPNVVGPFGLLQP ADG KL LKETI+P+SAN ++F+IAPMITFI A+V WAV+PF +     WV+AN+NVGILYLFA+SSLGVYGII+AGWASNSKYAFLGALRSAAQMVSYEVSIGFVL+TVL+CVGSLNL DVVLAQ G GFW+W+FLPL PMFVIFF+SALAETNR PFDLP +EAELV+G++ EYS+MTF LFFLGEYANMILLSALG  LFLGGW+ P+ +APFT+VPG +WF LK   LLFVF W + T PRYRYDQLMRLGWKVFLP+SL  VV+ A  LQ   W+P
Sbjct:   12 VLIVLSILAILIPVLLSVAYLTYAERKVIAAMQLRRGPNVVGPFGLLQPIADGAKLFLKETIIPTSANKVVFVIAPMITFILAMVGWAVIPFGESSSGIWVLANVNVGILYLFAVSSLGVYGIIMAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLVTVLICVGSLNLGDVVLAQKGSGFWNWYFLPLFPMFVIFFISALAETNRAPFDLPEAEAELVSGYNVEYSSMTFALFFLGEYANMILLSALGTTLFLGGWLPPLDFAPFTWVPGPIWFMLKTFALLFVFLWVRATFPRYRYDQLMRLGWKVFLPLSLAAVVIVAGTLQIFDWLP 342          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A8J7V0P5_9PROT (NADH-quinone oxidoreductase subunit H n=1 Tax=Marivibrio halodurans TaxID=2039722 RepID=A0A8J7V0P5_9PROT)

HSP 1 Score: 491 bits (1264), Expect = 1.180e-168
Identity = 237/324 (73.15%), Postives = 282/324 (87.04%), Query Frame = 1
Query:  736 ILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVP 1707
            I+A  LA+TVP+LV+VAY+T  +RKV   +QLR+GPNVVGPFGLLQPFADGLKL+LKETI+PS AN +LF++APM+TF+ ALVAWAV+PFDDGWV+A+INVG+LYLFAISSLGVYGII+AGWASNSKYAFLGALRSAAQMVSYEVSIGFV+++VLLCVGSL L+DVV AQ      WFF+PLLPMFV+F +SALAETNR PFDLP +EAELV+G++ EYSAM F LFFLGEYANMIL+S + A+LFLGGW+ P+  APF ++PGV+WFALKIA +LF F W + T PRYRYDQLMRLGWKVFLP+SL WV++TA  L   GW+P
Sbjct:   20 IVALILAITVPILVSVAYLTLAERKVIGWMQLRKGPNVVGPFGLLQPFADGLKLLLKETIIPSGANRVLFLVAPMLTFVLALVAWAVIPFDDGWVLADINVGVLYLFAISSLGVYGIIVAGWASNSKYAFLGALRSAAQMVSYEVSIGFVIVSVLLCVGSLRLTDVVEAQRT---IWFFIPLLPMFVVFLISALAETNRAPFDLPEAEAELVSGYNVEYSAMAFALFFLGEYANMILMSGMTAVLFLGGWLPPVDVAPFNWIPGVIWFALKIALVLFFFLWVRATFPRYRYDQLMRLGWKVFLPLSLAWVIITAGALMAFGWLP 340          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A7Y0E2H8_9PROT (NADH-quinone oxidoreductase subunit H n=1 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0E2H8_9PROT)

HSP 1 Score: 490 bits (1262), Expect = 3.050e-168
Identity = 235/313 (75.08%), Postives = 279/313 (89.14%), Query Frame = 1
Query:  751 LAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSG-GFWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVL 1686
            LA+TVP+L+ VAY+T  +RKV   +Q R+GPNVVGPFGLLQP ADGLKL LKET+VPS AN +LF+IAPM+TFI AL+AWAV+PFDDGWV+A+INVG+LYLFAISSLGVYGII+AGWASNSKYAFLGALRSAAQMVSYEVSIGFV+++VLLCVGSLNLSD+V +Q+G GFW+W+FLP+LPMFV+F +SALAETNR PFDLP +EAELV+G++ EYSAM F LFFLGEYANMIL+SA+ ++LFLGGW+ P   APFT++PG +WFALKIAF+LF+F W + T PRYRYDQLMRLGWKVFLP+SL WVV TA  L
Sbjct:   29 LAITVPILLGVAYLTLAERKVIGWMQYRKGPNVVGPFGLLQPLADGLKLFLKETVVPSGANPVLFLIAPMLTFILALIAWAVIPFDDGWVLADINVGVLYLFAISSLGVYGIIVAGWASNSKYAFLGALRSAAQMVSYEVSIGFVIVSVLLCVGSLNLSDIVKSQAGSGFWNWYFLPMLPMFVVFVISALAETNRAPFDLPEAEAELVSGYNVEYSAMAFALFFLGEYANMILMSAMTSVLFLGGWLPPFDIAPFTWIPGPIWFALKIAFVLFIFLWVRATFPRYRYDQLMRLGWKVFLPLSLFWVVATAGFL 341          
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Match: A0A2S6QCT0_9PROT (NADH-quinone oxidoreductase subunit H n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6QCT0_9PROT)

HSP 1 Score: 487 bits (1253), Expect = 5.110e-167
Identity = 233/327 (71.25%), Postives = 283/327 (86.54%), Query Frame = 1
Query:  730 IVILAQCLAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLVLKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILYLFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVLLCVGSLNLSDVVLAQSGG-FWHWFFLPLLPMFVIFFVSALAETNRTPFDLPMSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIPYAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPVSLGWVVLTAAVLQFGGWVP 1707
            ++I+ Q L + +P++  VAY+T  +RKV A++QLR+GPNVVGPFGL QP ADGLKL++KET++PS AN ++FI+APM+TFI ALVAWAV+PFD GWV+A+INVG+LYLFAISSLGVYGII+AGWASNSKYAFLGALRSAAQMVSYEV+IGFV+ITVL+CVGSLNL+DVV+AQ GG FW W++LPL PMF+IFF+SALAETNR PFDLP +EAELV+G++ EYS+MTF LFFLGEYANMIL+S + A+LFLGGW+ P    PFT++PG++WFALKIA  LFVF W + T PRYRYDQLMRLGWKVFLP SL WVV+TA  L    W+P
Sbjct:   13 LIIVGQILLIILPIMGGVAYLTLAERKVIAAMQLRKGPNVVGPFGLFQPVADGLKLLVKETVIPSGANQVVFILAPMLTFILALVAWAVIPFDAGWVLADINVGVLYLFAISSLGVYGIIMAGWASNSKYAFLGALRSAAQMVSYEVAIGFVIITVLMCVGSLNLTDVVMAQQGGGFWTWYWLPLFPMFIIFFISALAETNRHPFDLPEAEAELVSGYNVEYSSMTFALFFLGEYANMILMSGMTAVLFLGGWLPPFDIEPFTWIPGIIWFALKIAMCLFVFLWVRATFPRYRYDQLMRLGWKVFLPFSLVWVVITAGALIAFDWLP 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12187.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1H8XGG7_9PROT5.560e-21894.22NADH-quinone oxidoreductase subunit H n=14 Tax=Alp... [more]
UPI0005F4B2C14.390e-21657.54NADH-ubiquinone oxidoreductase 75 kDa subunit-like... [more]
A0A537MZB5_9PROT6.090e-21591.77NADH-quinone oxidoreductase subunit H n=1 Tax=Alph... [more]
A0A1T4KWQ6_9HYPH2.550e-20990.21NADH-quinone oxidoreductase subunit H n=2 Tax=Enhy... [more]
A0A5C8PPB8_9HYPH4.230e-20387.31NADH-quinone oxidoreductase subunit H n=4 Tax=Hyph... [more]
A0A812UZ38_SYMMI9.930e-20156.25Ndufs1 protein n=5 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A2E7HE84_9PROT1.060e-16872.81NADH-quinone oxidoreductase subunit H n=1 Tax=Rhod... [more]
A0A8J7V0P5_9PROT1.180e-16873.15NADH-quinone oxidoreductase subunit H n=1 Tax=Mari... [more]
A0A7Y0E2H8_9PROT3.050e-16875.08NADH-quinone oxidoreductase subunit H n=1 Tax=Paci... [more]
A0A2S6QCT0_9PROT5.110e-16771.25NADH-quinone oxidoreductase subunit H n=3 Tax=Alph... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12187contigP-wetherbeei_contig12187:157..2028 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000010_gene3771
Preferred namenuoH
PFAMsNADHdh
Model size1716
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00061
KEGG koko:K00337
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categoryother localisation
Exons2
Evalue5.87e-222
EggNOG OGsCOG1005@1|root,COG1005@2|Bacteria,1MU2R@1224|Proteobacteria,2TS09@28211|Alphaproteobacteria,2JPWU@204441|Rhodospirillales
EC1.6.5.3
DescriptionNDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
Cds size1716
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185941.000804-CDS-P-wetherbeei_contig12187:156..11461683185941.000804-CDS-P-wetherbeei_contig12187:156..1146Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12187 157..1146 -
1683185941.009555-CDS-P-wetherbeei_contig12187:1302..20281683185941.009555-CDS-P-wetherbeei_contig12187:1302..2028Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12187 1303..2028 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12187.3.1prot_P-wetherbeei_contig12187.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12187 157..2028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12187.3.1

>prot_P-wetherbeei_contig12187.3.1 ID=prot_P-wetherbeei_contig12187.3.1|Name=mRNA_P-wetherbeei_contig12187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=572bp
YPVARLGAGPATLRELVDGKLGFSEKLKTAKHPLIVVGMGALAREDGAAI
LALARDLAEKLNAVRADWNGFAVLHTTAARVGGLDLGLVPGDGGRDVEGI
LAGCEKREIELVYLLAADEIDTKRLGKAFVVYQGHHGDVGAHRADVVLPG
AAYTEKPGTYVNTEGRVQLGQRAGYPPGDAREDWAILRALSERLGKTLPY
DTLDQVRARLVAVNKTFAAIDQQTAGTWGVFGKAGTLTDQPFAIVILAQC
LAVTVPLLVAVAYMTYVDRKVWASIQLRRGPNVVGPFGLLQPFADGLKLV
LKETIVPSSANAILFIIAPMITFITALVAWAVVPFDDGWVIANINVGILY
LFAISSLGVYGIIIAGWASNSKYAFLGALRSAAQMVSYEVSIGFVLITVL
LCVGSLNLSDVVLAQSGGFWHWFFLPLLPMFVIFFVSALAETNRTPFDLP
MSEAELVAGFHTEYSAMTFGLFFLGEYANMILLSALGAILFLGGWMSPIP
YAPFTYVPGVVWFALKIAFLLFVFSWTKGTLPRYRYDQLMRLGWKVFLPV
SLGWVVLTAAVLQFGGWVPKL*
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mRNA from alignment at P-wetherbeei_contig12187:157..2028-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12187.3.1 ID=mRNA_P-wetherbeei_contig12187.3.1|Name=mRNA_P-wetherbeei_contig12187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1872bp|location=Sequence derived from alignment at P-wetherbeei_contig12187:157..2028- (Phaeothamnion wetherbeei SAG_119_79)
TATCCGGTCGCGCGGCTCGGTGCCGGCCCCGCGACATTGCGTGAGCTGGT CGACGGCAAGCTCGGCTTCTCCGAGAAGCTGAAGACGGCGAAGCACCCGT TGATCGTCGTCGGCATGGGCGCGCTGGCGCGCGAAGACGGCGCCGCCATC CTGGCGCTGGCCCGCGATCTCGCCGAGAAGCTGAACGCCGTCCGTGCCGA CTGGAACGGCTTTGCCGTGCTCCACACGACGGCCGCGCGTGTTGGCGGCC TCGACCTCGGCCTGGTGCCGGGTGACGGTGGTCGCGACGTCGAGGGCATC CTGGCCGGCTGCGAAAAGCGCGAGATCGAGCTGGTCTATCTCCTGGCCGC GGACGAGATCGACACCAAGCGGCTCGGCAAGGCTTTCGTGGTCTATCAGG GACATCATGGCGACGTCGGGGCTCATCGTGCCGATGTCGTCCTGCCGGGC GCTGCCTATACCGAAAAGCCCGGTACCTATGTGAACACCGAAGGCCGCGT GCAGCTCGGCCAGCGTGCTGGCTATCCGCCGGGCGATGCCCGCGAGGACT GGGCGATCCTGCGGGCGCTTTCAGAGCGGTTGGGCAAGACGCTCCCCTAT GACACACTCGACCAGGTTCGTGCTCGCCTGGTCGCGGTGAACAAGACCTT CGCCGCCATCGACCAGCAGACGGCGGGTACATGGGGTGTCTTCGGCAAGG CGGGGACCTTGACCGATCAGCCGTTCGTCTCGCCGATCGTCAATTTCTAC ATGACCTGCCCGATCAGCCGGGCGTCCAAGACAATGGCCGAGTGCATGGC CTCGCGCGCCCAACTCATGGCGGCGGAGTAGGGCATGAGCGCCGATCTGA TCCAGTTCTTCACCACCAACTGGCTGGGCCAGGCCATCGTCATCCTGGCC CAATGCCTGGCCGTCACGGTGCCGCTGCTGGTTGCCGTCGCCTACATGAC CTACGTCGACCGCAAGGTCTGGGCCTCGATCCAGCTTCGCCGCGGTCCCA ATGTGGTTGGCCCGTTCGGCCTGCTGCAGCCGTTCGCCGACGGCTTGAAG CTGGTGCTGAAGGAAACCATCGTTCCGTCCAGCGCCAATGCGATCTTGTT CATTATCGCGCCGATGATCACCTTCATCACGGCGCTGGTCGCCTGGGCAG TGGTGCCGTTCGACGACGGCTGGGTCATTGCCAACATCAACGTTGGCATT CTCTACCTCTTCGCCATCTCCTCGCTCGGCGTCTATGGCATCATCATCGC CGGCTGGGCGTCGAACTCGAAATACGCCTTCCTGGGCGCGCTGCGCTCGG CGGCGCAAATGGTGTCCTACGAAGTCTCGATCGGCTTCGTGCTGATCACC GTACTGCTCTGCGTCGGCTCGCTCAATCTTTCCGATGTGGTGTTGGCTCA GTCCGGCGGATTCTGGCACTGGTTCTTCCTGCCGCTGCTGCCGATGTTCG TGATCTTCTTCGTGTCGGCCCTGGCGGAAACCAACCGCACGCCCTTCGAT CTGCCGATGTCCGAAGCCGAGCTGGTGGCAGGCTTCCACACCGAATACTC GGCGATGACGTTCGGCCTGTTCTTCCTCGGCGAATACGCCAACATGATCC TCTTGTCGGCGCTCGGGGCCATTCTGTTCCTGGGCGGCTGGATGTCGCCG ATCCCGTATGCGCCCTTCACCTACGTGCCGGGGGTGGTCTGGTTCGCACT CAAGATCGCGTTCCTGCTGTTCGTCTTCAGCTGGACCAAAGGCACGCTGC CTCGTTACCGCTACGACCAGTTGATGCGGCTGGGCTGGAAAGTGTTCCTG CCGGTCTCGTTGGGCTGGGTCGTTCTCACCGCCGCCGTGCTGCAGTTCGG CGGCTGGGTTCCGAAGCTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12187:157..2028-

>mRNA_P-wetherbeei_contig12187.3.1 ID=mRNA_P-wetherbeei_contig12187.3.1|Name=mRNA_P-wetherbeei_contig12187.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1716bp|location=Sequence derived from alignment at P-wetherbeei_contig12187:157..2028- (Phaeothamnion wetherbeei SAG_119_79)
TATCCGGTCGCGCGGCTCGGTGCCGGCCCCGCGACATTGCGTGAGCTGGT
CGACGGCAAGCTCGGCTTCTCCGAGAAGCTGAAGACGGCGAAGCACCCGT
TGATCGTCGTCGGCATGGGCGCGCTGGCGCGCGAAGACGGCGCCGCCATC
CTGGCGCTGGCCCGCGATCTCGCCGAGAAGCTGAACGCCGTCCGTGCCGA
CTGGAACGGCTTTGCCGTGCTCCACACGACGGCCGCGCGTGTTGGCGGCC
TCGACCTCGGCCTGGTGCCGGGTGACGGTGGTCGCGACGTCGAGGGCATC
CTGGCCGGCTGCGAAAAGCGCGAGATCGAGCTGGTCTATCTCCTGGCCGC
GGACGAGATCGACACCAAGCGGCTCGGCAAGGCTTTCGTGGTCTATCAGG
GACATCATGGCGACGTCGGGGCTCATCGTGCCGATGTCGTCCTGCCGGGC
GCTGCCTATACCGAAAAGCCCGGTACCTATGTGAACACCGAAGGCCGCGT
GCAGCTCGGCCAGCGTGCTGGCTATCCGCCGGGCGATGCCCGCGAGGACT
GGGCGATCCTGCGGGCGCTTTCAGAGCGGTTGGGCAAGACGCTCCCCTAT
GACACACTCGACCAGGTTCGTGCTCGCCTGGTCGCGGTGAACAAGACCTT
CGCCGCCATCGACCAGCAGACGGCGGGTACATGGGGTGTCTTCGGCAAGG
CGGGGACCTTGACCGATCAGCCGTTCGCCATCGTCATCCTGGCCCAATGC
CTGGCCGTCACGGTGCCGCTGCTGGTTGCCGTCGCCTACATGACCTACGT
CGACCGCAAGGTCTGGGCCTCGATCCAGCTTCGCCGCGGTCCCAATGTGG
TTGGCCCGTTCGGCCTGCTGCAGCCGTTCGCCGACGGCTTGAAGCTGGTG
CTGAAGGAAACCATCGTTCCGTCCAGCGCCAATGCGATCTTGTTCATTAT
CGCGCCGATGATCACCTTCATCACGGCGCTGGTCGCCTGGGCAGTGGTGC
CGTTCGACGACGGCTGGGTCATTGCCAACATCAACGTTGGCATTCTCTAC
CTCTTCGCCATCTCCTCGCTCGGCGTCTATGGCATCATCATCGCCGGCTG
GGCGTCGAACTCGAAATACGCCTTCCTGGGCGCGCTGCGCTCGGCGGCGC
AAATGGTGTCCTACGAAGTCTCGATCGGCTTCGTGCTGATCACCGTACTG
CTCTGCGTCGGCTCGCTCAATCTTTCCGATGTGGTGTTGGCTCAGTCCGG
CGGATTCTGGCACTGGTTCTTCCTGCCGCTGCTGCCGATGTTCGTGATCT
TCTTCGTGTCGGCCCTGGCGGAAACCAACCGCACGCCCTTCGATCTGCCG
ATGTCCGAAGCCGAGCTGGTGGCAGGCTTCCACACCGAATACTCGGCGAT
GACGTTCGGCCTGTTCTTCCTCGGCGAATACGCCAACATGATCCTCTTGT
CGGCGCTCGGGGCCATTCTGTTCCTGGGCGGCTGGATGTCGCCGATCCCG
TATGCGCCCTTCACCTACGTGCCGGGGGTGGTCTGGTTCGCACTCAAGAT
CGCGTTCCTGCTGTTCGTCTTCAGCTGGACCAAAGGCACGCTGCCTCGTT
ACCGCTACGACCAGTTGATGCGGCTGGGCTGGAAAGTGTTCCTGCCGGTC
TCGTTGGGCTGGGTCGTTCTCACCGCCGCCGTGCTGCAGTTCGGCGGCTG
GGTTCCGAAGCTTTAG
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