mRNA_P-wetherbeei_contig12045.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: D8LAY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY3_ECTSI) HSP 1 Score: 118 bits (296), Expect = 2.220e-24 Identity = 119/163 (73.01%), Postives = 135/163 (82.82%), Query Frame = 2 Query: 29 MAWRRIDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTGTEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLTDNRGNRPGDHFDGDVPDERRAAIAVMMGAV 517 MAWRRIDVH+A ERGD+ V+ RYLDAGGD E++D +Y A+P+HWA LRGR A +LL+RG D+E+RT T+GT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP DNRG+RPGD FD +V D R AI + V Sbjct: 1 MAWRRIDVHRAVERGDLAVVKRYLDAGGDPEQKDEEYGAAPVHWAALRGRSDALSLLLERGGDVESRTSTDGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAEDNRGDRPGDKFDPEVTDSNRRAIKKALARV 163
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A6H5JTU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTU0_9PHAE) HSP 1 Score: 117 bits (292), Expect = 8.120e-24 Identity = 120/163 (73.62%), Postives = 134/163 (82.21%), Query Frame = 2 Query: 29 MAWRRIDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTGTEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDLTDNRGNRPGDHFDGDVPDERRAAIAVMMGAV 517 MAWRRIDVH+A ERGD+ V+ RYLDAGGD EK+D Y A+P+HWA LRGR A +LL+RG D+E+RT T+GT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP DNRG+RPGD FD +V D R AI + V Sbjct: 1 MAWRRIDVHRAVERGDLAVVKRYLDAGGDPEKKDEKYGAAPVHWAALRGRSDALSLLLERGGDVESRTCTDGTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKAEDNRGDRPGDKFDPEVTDSDRRAIKQALARV 163
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A835ZAM8_9STRA (Ankyrin repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAM8_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.970e-17 Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 2 Query: 29 MAWRRIDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEART 232 MAW+R+D +AA+RG+V +L +YLD+GG + +D Y A+PLHWACLRG+ A +L++R A LEART Sbjct: 1 MAWKRVDPFRAAQRGEVSMLRQYLDSGGSISAQDDKYLATPLHWACLRGKLDAVALLIERSAPLEART 68
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A0M8MZ53_9BASI (Palmitoyltransferase n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0M8MZ53_9BASI) HSP 1 Score: 61.2 bits (147), Expect = 3.910e-6 Identity = 31/63 (49.21%), Postives = 37/63 (58.73%), Query Frame = 2 Query: 47 DVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTG 235 DVH A+RGDV L LDAG DV RDAD +PLHWA + LL+RGAD+ + G Sbjct: 7 DVHTCAQRGDVPALEALLDAGVDVNLRDAD-GVTPLHWAAINAHVACCEWLLERGADVHCQGG 68
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A836C9J9_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9J9_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 1.510e-5 Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 2 Query: 44 IDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTG 235 + + +AA RGD+ ++ R+L AGGDV RD D+ SPLH AC G + A +LLD A + R G Sbjct: 9 VSIFEAARRGDLAMVERWLQAGGDVNVRD-DHDWSPLHIACEAGYYEIAELLLDYSAQVNVRGG 71
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A1F4PID2_9BACT (Uncharacterized protein n=1 Tax=candidate division TM6 bacterium RIFCSPHIGHO2_12_FULL_32_22 TaxID=1802375 RepID=A0A1F4PID2_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 2.200e-5 Identity = 30/67 (44.78%), Postives = 39/67 (58.21%), Query Frame = 2 Query: 47 DVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTGTEGT 247 D+ KAAE G++V + LDAG DV + + L WA G AR+LLDRGAD++A T GT Sbjct: 24 DLLKAAENGNLVGVEAALDAGADVNNATEGWRLTALMWAATNGHTDIARLLLDRGADIDAVDVTGGT 90
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A382QYV1_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382QYV1_9ZZZZ) HSP 1 Score: 55.8 bits (133), Expect = 3.380e-5 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 2 Query: 59 AAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEAR 229 AAE GDV + YL +V+ RD Y +PLH+A RGR++ A +L++ GAD+ A+ Sbjct: 26 AAEEGDVEAVKGYLAIDVNVDARDDVYEGTPLHFAAFRGRKEVAELLINEGADVNAK 82
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A7S4KW95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KW95_9EUKA) HSP 1 Score: 56.2 bits (134), Expect = 4.050e-5 Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 2 Query: 44 IDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTGTEG 244 +D+HKAA++GD++++++ L + V + Y +PLHWAC G+ +A L+ +GAD A EG Sbjct: 3 LDLHKAAQKGDLLLMDQLLSSRKVVVDKRDPYGGTPLHWACQAGQVEAINWLVSKGADAHAIATYEG 69
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A382VSR7_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382VSR7_9ZZZZ) HSP 1 Score: 54.7 bits (130), Expect = 6.040e-5 Identity = 28/62 (45.16%), Postives = 36/62 (58.06%), Query Frame = 2 Query: 50 VHKAAERGDVVVLNRYLDAGGDVEKRDADYHA---SPLHWACLRGREQAARILLDRGADLEA 226 +HKA GD + LDAG DV R+AD +PLHWA G + A +L+ RGADL+A Sbjct: 21 LHKAVRAGDADRVRELLDAGADVNVRNADKQRLQYTPLHWAAHFGHLEIAELLISRGADLDA 82
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Match: A0A442MDY3_9HYPH (C-type cytochrome n=1 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A442MDY3_9HYPH) HSP 1 Score: 56.2 bits (134), Expect = 6.510e-5 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 2 Query: 50 VHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGREQAARILLDRGADLEARTGTEGT 247 +H AA++GDV + LDAG +V + D A+PLH+A R AAR+LL+RGAD++A + GT Sbjct: 23 IHDAAKKGDVAAIAAALDAGANVNESDG--LAAPLHYAVNRQHLDAARLLLERGADVKAVSKLGGT 86 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12045.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12045.1.1 >prot_P-wetherbeei_contig12045.1.1 ID=prot_P-wetherbeei_contig12045.1.1|Name=mRNA_P-wetherbeei_contig12045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=531bp MAWRRIDVHKAAERGDVVVLNRYLDAGGDVEKRDADYHASPLHWACLRGRback to top mRNA from alignment at P-wetherbeei_contig12045:2..1786- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12045.1.1 ID=mRNA_P-wetherbeei_contig12045.1.1|Name=mRNA_P-wetherbeei_contig12045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1785bp|location=Sequence derived from alignment at P-wetherbeei_contig12045:2..1786- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12045:2..1786- >mRNA_P-wetherbeei_contig12045.1.1 ID=mRNA_P-wetherbeei_contig12045.1.1|Name=mRNA_P-wetherbeei_contig12045.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig12045:2..1786- (Phaeothamnion wetherbeei SAG_119_79)back to top |