mRNA_P-wetherbeei_contig12034.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A7C4TV10_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TV10_9HYPH) HSP 1 Score: 313 bits (803), Expect = 3.060e-105 Identity = 159/226 (70.35%), Postives = 192/226 (84.96%), Query Frame = 1 Query: 31 LLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPK 708 +LEA GIVK+ G+G+ K+LKGID+ L GELTLLMGPSGSGKTTLLSI+GC+++P+GG +++ G GL++E LAD+RRRH+GFVFQSYNLFPT+ L+NVLLA+DVR S DPY+ A +AL VGLSHR ++P+KLSGGEKQRVAIARALAGSPSV+LADEPTAALD+ENGKAVMALL++V QDP RAVLAVTHDHR L YADRI+ IEDG I SD+RP+ Sbjct: 14 ILEAKGIVKVLGTGAGEIKILKGIDLQLKGGELTLLMGPSGSGKTTLLSILGCILSPSGGHVKIAGLSTAGLNSEGLADLRRRHVGFVFQSYNLFPTLTALENVLLALDVRDDDSADPYEKAREALAAVGLSHRANSYPAKLSGGEKQRVAIARALAGSPSVILADEPTAALDSENGKAVMALLAQVAQDPRRAVLAVTHDHRTLGYADRILGIEDGRINSDKRPQ 239
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: UPI0019ABF346 (ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019ABF346) HSP 1 Score: 308 bits (790), Expect = 1.050e-102 Identity = 159/236 (67.37%), Postives = 189/236 (80.08%), Query Frame = 1 Query: 1 MTGHDKVRKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPK 708 MT + RK LL+A IVK+ GSG+ + LKG+D+ L+ GELTLLMGPSGSGKTTLLSI+GC+++PT G + V G +G AE LA+IRRRH+GFVFQ YNLFPTM +NV+LA+DVR VDP A AL+ VGL HR +A+P+KLSGGEKQRVA+ARALAG+PSV+LADEPTAALD ENG+AVMALLS+V +DP RAVLAVTHDHR LPYADRI+ IEDG I SDERPK Sbjct: 1 MTDANDNRKVLLDARDIVKVFGSGAGEVRPLKGVDLRLYAGELTLLMGPSGSGKTTLLSILGCILSPTEGHIEVAGNSTLGQDAEGLANIRRRHVGFVFQGYNLFPTMTAAENVMLALDVRAKPVVDPPTHALNALIAVGLGHRAKAYPAKLSGGEKQRVALARALAGAPSVILADEPTAALDAENGRAVMALLSEVAKDPNRAVLAVTHDHRTLPYADRIVRIEDGKIHSDERPK 236
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: UPI0003667917 (ABC transporter ATP-binding protein n=2 Tax=Hyphomicrobium TaxID=81 RepID=UPI0003667917) HSP 1 Score: 306 bits (785), Expect = 1.970e-102 Identity = 157/236 (66.53%), Postives = 191/236 (80.93%), Query Frame = 1 Query: 25 KPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPKDAKKTGSP 732 +PLLEA IVK G+G+ +LKG+ + L PGELTLLMGPSGSGKTTLLSI+GC+++ T G+L + G + +G S+E LA+IRR+H+GFVFQSYNLFPT+ ++NVL+A+DVR S DP + A +AL VGLSHR+ +PSKLSGGEKQRVAIAR+LAG PSVVLADEPTAALD+ENGKAVM LL++V +DPTRAV+AVTHDHR L YADRII+IEDG IV DERP K G P Sbjct: 12 RPLLEARNIVKTIGTGAGELHILKGVSMDLRPGELTLLMGPSGSGKTTLLSILGCILSATSGELHLAGHQAVGQSSEDLAEIRRQHVGFVFQSYNLFPTLTAIENVLVALDVRDARSADPMETAAEALKSVGLSHRMHTYPSKLSGGEKQRVAIARSLAGRPSVVLADEPTAALDSENGKAVMELLTEVAKDPTRAVMAVTHDHRTLHYADRIITIEDGRIVGDERPP---KKGGP 244
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A6I3KPI6_9HYPH (ATP-binding cassette domain-containing protein n=1 Tax=Hyphomicrobium album TaxID=2665159 RepID=A0A6I3KPI6_9HYPH) HSP 1 Score: 307 bits (786), Expect = 3.970e-102 Identity = 157/229 (68.56%), Postives = 186/229 (81.22%), Query Frame = 1 Query: 22 RKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPK 708 RK LLEA IVK+ GSG+ + LKGID+ L+ GELTLLMGPSGSGKTTLLSI+GC+++PT G L V G + +GL AE LA++RR+H+GFVFQ YNLFPTM +NV+LA+DVR VDP A AL+ VGL HR +P+KLSGGEKQRVA+ARALAG+PSV+LADEPTAALD ENG+AVMALLS+V +DP RAVLAVTHDHR LPYADRI+ IEDG I SDERP+ Sbjct: 7 RKVLLEARDIVKVFGSGAYEVRPLKGIDLKLYSGELTLLMGPSGSGKTTLLSILGCILSPTEGQLDVAGNQTVGLDAEGLANVRRQHVGFVFQGYNLFPTMTATENVMLALDVRAKPVVDPPVHALNALIAVGLGHRANTYPAKLSGGEKQRVALARALAGAPSVILADEPTAALDAENGRAVMALLSEVAKDPNRAVLAVTHDHRTLPYADRIVRIEDGKIHSDERPQ 235
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: V5SFR6_9HYPH (ABC transporter n=1 Tax=Hyphomicrobium nitrativorans NL23 TaxID=1029756 RepID=V5SFR6_9HYPH) HSP 1 Score: 305 bits (781), Expect = 7.740e-102 Identity = 159/237 (67.09%), Postives = 190/237 (80.17%), Query Frame = 1 Query: 25 KPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERP-KDAKKTGSP 732 +PLLEA I K +G+ +LKG+ + L PGELTLLMGPSGSGKTTLLSI+GC++T T G+L + G + +GLS+E LA+IRR HIGFVFQSYNLFPT+ L+NVL+A+DVR S DP + A +AL VGL HR+ +PSKLSGGEKQRVAIAR+LAG PSVVLADEPTAALD+ENGKAVM LLS+V +DPTRAV+AVTHDHR L YADRII+IEDG IV DERP K+ G+P Sbjct: 12 RPLLEAQNITKSIDTGAGVLHILKGVSMDLRPGELTLLMGPSGSGKTTLLSILGCILTATSGELHLAGHQAVGLSSEDLAEIRRLHIGFVFQSYNLFPTLTALENVLVALDVRDARSADPMETAAEALRAVGLGHRLNNYPSKLSGGEKQRVAIARSLAGRPSVVLADEPTAALDSENGKAVMELLSEVAKDPTRAVMAVTHDHRTLHYADRIITIEDGRIVGDERPPKNGPGQGAP 248
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A2W4MI90_9PROT (ABC transporter ATP-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4MI90_9PROT) HSP 1 Score: 306 bits (784), Expect = 8.260e-102 Identity = 159/238 (66.81%), Postives = 188/238 (78.99%), Query Frame = 1 Query: 25 KPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPKDAKKTGSPDH 738 K ++ A G+VK+ GSG+ KVLKGID+ L GELTLLMGPSGSGKTTLLSI+GC++TPT G L + GE L E LAD+RRRH+GFVFQSYNLFPT+N N+LLA+D+ + + A +AL EVGL+HR A+P ++SGGEKQRVAIARALAGSPSV+LADEPTAALD+ENGKAVMALLS+V +DP+RAVLAVTHDHR L YADRII IEDG IVSDERP A + S H Sbjct: 35 KTIVRAKGLVKVLGSGANELKVLKGIDLELKAGELTLLMGPSGSGKTTLLSILGCILTPTSGTLEIAGESTADLGPEGLADLRRRHVGFVFQSYNLFPTLNATQNILLALDLCGISGPEASECAVRALGEVGLTHRANAYPGQMSGGEKQRVAIARALAGSPSVILADEPTAALDSENGKAVMALLSEVAKDPSRAVLAVTHDHRTLAYADRIIQIEDGRIVSDERPTPAPEPESIGH 272
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A6I0EBY0_HYPSQ (ABC transporter ATP-binding protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EBY0_HYPSQ) HSP 1 Score: 305 bits (782), Expect = 1.610e-101 Identity = 159/228 (69.74%), Postives = 184/228 (80.70%), Query Frame = 1 Query: 22 RKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERP 705 RK LLEA IVK+ GSG+ + LKGID+ L+ GELTLLMGPSGSGKTTLLSI+GC+++PT G L V G GL AE LA++RR H+GFVFQ YNLFPTM +NV+LA+DVR VDP A AL+ VGL HR +AFP+KLSGGEKQRVA+ARALAG+PSV+LADEPTAALD ENG+AVMALLS+V +DP RAVLAVTHDHR LPYADRI+ IEDG I SDERP Sbjct: 9 RKVLLEARDIVKVFGSGAGEVRPLKGIDLKLYAGELTLLMGPSGSGKTTLLSILGCILSPTEGHLEVAGNTTDGLDAEGLANLRRHHVGFVFQGYNLFPTMTASENVMLALDVRAKPVVDPPTHALNALIAVGLGHRAKAFPAKLSGGEKQRVALARALAGAPSVILADEPTAALDAENGRAVMALLSEVAKDPNRAVLAVTHDHRTLPYADRIVRIEDGKIHSDERP 236
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A125NVA8_HYPSL (ABC transporter ATP-binding protein n=2 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A125NVA8_HYPSL) HSP 1 Score: 303 bits (777), Expect = 3.350e-100 Identity = 158/235 (67.23%), Postives = 187/235 (79.57%), Query Frame = 1 Query: 22 RKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPKDAKKTG 726 RK LLEA+GI K+ G+G+ LKG+D+ L+ GELTLLMGPSGSGKTTLLSI+GC+++PT G+L V G+ +G AE LADIRR H+GFVFQSYNLFPTM +NV+LA+DVR DP A +AL VGLSHR A+P+KLSGGEKQRVAIARALAGSP+V+LADEPTAALD ENG+ VMALLS+V +D +RAVLAVTHDHR LPYADRII I+DG I SDERP + G Sbjct: 7 RKVLLEASGITKVFGTGAGQVMPLKGVDLKLYSGELTLLMGPSGSGKTTLLSILGCILSPTDGELTVAGQSTLGADAERLADIRRNHVGFVFQSYNLFPTMTARENVMLALDVRSKAVPDPNADALRALEAVGLSHRAHAYPAKLSGGEKQRVAIARALAGSPAVILADEPTAALDAENGRTVMALLSEVAKDTSRAVLAVTHDHRTLPYADRIILIDDGRIESDERPDKSDNGG 241
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A0D6JJF4_9HYPH (ABC transporter n=2 Tax=Filomicrobium TaxID=119044 RepID=A0A0D6JJF4_9HYPH) HSP 1 Score: 301 bits (771), Expect = 3.360e-100 Identity = 156/229 (68.12%), Postives = 184/229 (80.35%), Query Frame = 1 Query: 19 VRKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERP 705 V +PLL A I K+ G+G+ +VLKGID+ L PGELTLLMGPSGSGKTTLLSI+GC++T G+L + G G+S E +AD+RR HIGFVFQSYNLFPT+ L+NV+LA+DVR + D A AL VGLSHRI +PSKLSGGEKQRVAIARALAGSPSV+LADEPTAALD+ENG+AVMALL++V +D +RAVLAVTHDHR L YADRII IEDG+IV DERP Sbjct: 10 VTEPLLVARQIKKVFGTGAGEVQVLKGIDLDLKPGELTLLMGPSGSGKTTLLSILGCILTQNSGELEIAGRNTTGMSPEEMADLRRHHIGFVFQSYNLFPTLTALENVMLALDVRDQLPADAPQRAASALNAVGLSHRINTYPSKLSGGEKQRVAIARALAGSPSVILADEPTAALDSENGQAVMALLAEVSRDTSRAVLAVTHDHRTLKYADRIIRIEDGFIVGDERP 238
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Match: A0A2S5MUL4_HYPSQ (ABC transporter ATP-binding protein n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MUL4_HYPSQ) HSP 1 Score: 295 bits (756), Expect = 2.550e-98 Identity = 153/231 (66.23%), Postives = 185/231 (80.09%), Query Frame = 1 Query: 22 RKPLLEATGIVK--IHGSGSLANKVLKGIDVALHPGELTLLMGPSGSGKTTLLSIMGCLMTPTGGDLRVVGEKGIGLSAEALADIRRRHIGFVFQSYNLFPTMNVLDNVLLAMDVRRTMSVDPYDLATKALVEVGLSHRIQAFPSKLSGGEKQRVAIARALAGSPSVVLADEPTAALDTENGKAVMALLSKVGQDPTRAVLAVTHDHRMLPYADRIISIEDGYIVSDERPK 708 R ++ A I K + G+G L +LKG+D+ L+PGELTLLMGPSGSGKTT LSI+GC++T T G L + GE+ +G +AE LAD+RRR+IGFVFQ YNLFPT+ +NVL+A+DVR DP A +L+ VGL+HRI FPSKLSGGEKQRVAIAR+LAG+P+VVLADEPTAALD+ENGKAVM LL+ VGQDP+RAVLAVTHDHR L +ADRII IEDG IV+DERPK Sbjct: 5 RPVIVRARAITKTIVTGAGDLT--ILKGVDLDLYPGELTLLMGPSGSGKTTFLSILGCILTATSGQLSINGEEAVGQTAEGLADLRRRNIGFVFQGYNLFPTLTAHENVLMALDVRGARLADPMQAARDSLISVGLAHRIDTFPSKLSGGEKQRVAIARSLAGNPAVVLADEPTAALDSENGKAVMELLAHVGQDPSRAVLAVTHDHRTLSFADRIIRIEDGRIVADERPK 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12034.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12034.1.1 >prot_P-wetherbeei_contig12034.1.1 ID=prot_P-wetherbeei_contig12034.1.1|Name=mRNA_P-wetherbeei_contig12034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=246bp MTGHDKVRKPLLEATGIVKIHGSGSLANKVLKGIDVALHPGELTLLMGPSback to top mRNA from alignment at P-wetherbeei_contig12034:220..957+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12034.1.1 ID=mRNA_P-wetherbeei_contig12034.1.1|Name=mRNA_P-wetherbeei_contig12034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig12034:220..957+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12034:220..957+ >mRNA_P-wetherbeei_contig12034.1.1 ID=mRNA_P-wetherbeei_contig12034.1.1|Name=mRNA_P-wetherbeei_contig12034.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=738bp|location=Sequence derived from alignment at P-wetherbeei_contig12034:220..957+ (Phaeothamnion wetherbeei SAG_119_79)back to top |