mRNA_P-wetherbeei_contig12022.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A7S2C5P0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5P0_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.720e-34 Identity = 65/135 (48.15%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 7 DSASCGVEDSSTPCCTECYG--LQYC-SALTGFEVEDKYMPSVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNS-PPVPPCRSFCVELAETCANNVEQYKTLCEDIDC 399 D CG D PCC C + YC AL G +ED+Y P+ GSC + DER L+VFG +TFRD D CR LV EY CLWWGS+N + NRC N PCR FCV++ CANN E + LC DI C Sbjct: 118 DDEDCGTSDEECPCCIRCLNEEMSYCHDALGGKLLEDQYYPTEKGISGSCDNLDERVGALDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANN-EDWMNLCYDIPC 251
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A835Z6T3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T3_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.420e-33 Identity = 64/161 (39.75%), Postives = 78/161 (48.45%), Query Frame = 1 Query: 19 CGVEDSSTPCCTECYGLQYCSALTGFEVEDKYMPSVASSQGSCWDFDERAQRLEVFGPERT-----------------------------------------------FRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETCANN 360 CGV + PCC C GL CS L + VE+KY P + + GSC +FD+R RL VFGPE+T FRDT CR VY Y+CLWWG+DN F NRC + PPCRSFCV++AE CAN+ Sbjct: 52 CGVAPNPVPCCVLCLGLNQCSVLNSYAVEEKYYPGSSGTVGSCTNFDDRVSRLAVFGPEKTVWXXXXXXXXXXXXXXXSCDAAQVXXXXXXXXEKTVSXXXXXXXXXXFRDTPDCRKWVYAYTCLWWGTDNAHFDNRCGSFANRPPCRSFCVQVAEVCAND 212
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A7S2RFQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFQ7_9STRA) HSP 1 Score: 110 bits (275), Expect = 2.000e-26 Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 1 Query: 7 DSASCGVEDSSTPCCTECYGLQYCSALTGFEVEDKYMPSVASSQGSCWDFDERAQRLEVFGPERT---FRDTDTCRALVYEYSCLWWGSDNDAFINRCTN-SPPVP--PCRSFCVELAETCANNVEQYKTLCEDIDC 399 DS SCG + C C L++C+ L +ED Y P++ ++ GSC + +ERA RL+++G RT F+DT CR+LV Y+CL W + F +RC++ S VP PCRSFC E+A TCAN+++ + +C +I C Sbjct: 140 DSQSCGPPPLTACCNASCSSLEHCAVLNDMVIEDTYFPTLPATHGSCLELEERASRLDLWGDYRTNKPFKDTPQCRSLVLNYTCLTWAT---MFPSRCSDLSEQVPRAPCRSFCTEVATTCANDLD-WINICHNIVC 272
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A1W0A1Z6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A1Z6_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.410e-24 Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 1 Query: 49 CTECYGLQYCSALTGFEVED------KYMPSVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 CT C+GLQYCS+L G + D + + QG C D D+ L VFG F+DTD+CRALVY+++CL W ++ N C N+P PPCRS CVE+A+TC Sbjct: 28 CTTCWGLQYCSSLNGLALPDPVSGYTRNATTQLQKQGVCEDIDKAVTLLTVFGSAYQFKDTDSCRALVYKFNCLSWAANG----NTCANAPS-PPCRSMCVEIADTC 129
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A7S2FUR6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUR6_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.010e-21 Identity = 42/76 (55.26%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 175 LEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNS-PPVPPCRSFCVELAETCANNVEQYKTLCEDIDC 399 L+VFG +TFRD D CR LV EY CLWWGS+N + NRC N PCR FCV++ CANN E + LC DI C Sbjct: 8 LDVFGKGKTFRDNDECRDLVREYVCLWWGSENAHYENRCNNGGQAAKPCRGFCVQVGLVCANN-EDWMNLCYDIPC 82
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A0A7CNY8_9STRA (Secreted protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CNY8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 2.940e-20 Identity = 48/121 (39.67%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 49 CTECYGLQYCSALTGFEVEDKYM--------------------PSVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 CT C+ LQ C L G + D + S S QG C D D LEVFG ++DT TCRAL+Y ++CL W S N C N+P +PPCRS CVE+A+TC Sbjct: 30 CTTCWQLQNCEVLNGHALPDTVLGYTRSSALCVQEFLNFRRNATSQLSKQGVCEDIDRAVTLLEVFGSAYQYKDTPTCRALIYRFNCLSWASKG----NTCPNAP-LPPCRSMCVEIADTC 145
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A6G0WZ04_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ04_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.070e-18 Identity = 42/107 (39.25%), Postives = 59/107 (55.14%), Query Frame = 1 Query: 49 CTECYGLQYCSALTGFEVEDKYM------PSVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 CT C+ L C AL G + D + + + QG C D D L +FG + ++DT CRALVY+ +CL W S N C N+P +PPCRS CV++A++C Sbjct: 32 CTSCWQLSNCKALNGLSLPDPIVGYTRNATTQLAKQGVCEDIDRAVTLLTIFGGQYQYKDTPACRALVYKLNCLTWASTK----NSCPNAP-LPPCRSMCVQVADSC 133
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: A0A067CP93_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CP93_SAPPC) HSP 1 Score: 84.0 bits (206), Expect = 2.200e-17 Identity = 43/101 (42.57%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 67 LQYCSALTGFEVEDKYM------PSVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 LQ+C+ L G + D + S QG C D D RL VFG F+DT CR LV +++CL W + N N C N+P +PPCRS CVE+A+TC Sbjct: 36 LQHCATLNGLALPDPIVGYTRNATSQLEKQGVCEDLDASVARLGVFGSAYQFKDTPGCRGLVNKFNCLSWAAAN----NACPNAP-LPPCRSMCVEIADTC 131
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: T0QGT9_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QGT9_SAPDV) HSP 1 Score: 75.5 bits (184), Expect = 1.280e-14 Identity = 36/77 (46.75%), Postives = 46/77 (59.74%), Query Frame = 1 Query: 121 SVASSQGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWWGSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 S QG C D D RL VFG F+DT CRA V +++CL W + N N C N+P +PPCRS CV++A+TC Sbjct: 7 SQLEKQGVCEDLDASVARLGVFGAAYQFKDTPACRASVNKFNCLSWAAAN----NACPNAP-LPPCRSMCVDIADTC 78
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Match: H3GX36_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GX36_PHYRM) HSP 1 Score: 74.7 bits (182), Expect = 1.830e-13 Identity = 42/120 (35.00%), Postives = 57/120 (47.50%), Query Frame = 1 Query: 49 CTECYGLQYCSALTGFEVEDKYMPSVASS---------QGSCWDFDERAQRLEVFGPERTFRDTDTCRALVYEYSCLWW----------GSDNDAFINRCTNSPPVPPCRSFCVELAETC 351 C +C GLQYC+ + G + D P V S QG C D D + L FG + F+DT C LV+ + CL W G+ + +PP+PPCRS CVE+A+ C Sbjct: 62 CVKCDGLQYCTIMNGQYLFD---PIVGYSREATPQLEKQGVCEDMDAKTLALSPFGNQVQFKDTAACHKLVWNFHCLSWVATTFQREVNGTQVSCASTGGSATPPLPPCRSLCVEVADKC 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12022.1.1 >prot_P-wetherbeei_contig12022.1.1 ID=prot_P-wetherbeei_contig12022.1.1|Name=mRNA_P-wetherbeei_contig12022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp ATDSASCGVEDSSTPCCTECYGLQYCSALTGFEVEDKYMPSVASSQGSCWback to top mRNA from alignment at P-wetherbeei_contig12022:54..1333- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12022.1.1 ID=mRNA_P-wetherbeei_contig12022.1.1|Name=mRNA_P-wetherbeei_contig12022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1280bp|location=Sequence derived from alignment at P-wetherbeei_contig12022:54..1333- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12022:54..1333- >mRNA_P-wetherbeei_contig12022.1.1 ID=mRNA_P-wetherbeei_contig12022.1.1|Name=mRNA_P-wetherbeei_contig12022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig12022:54..1333- (Phaeothamnion wetherbeei SAG_119_79)back to top |