mRNA_P-wetherbeei_contig119.7.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig119.7.4
Unique NamemRNA_P-wetherbeei_contig119.7.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A4D9CSS4_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSS4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.920e-35
Identity = 105/322 (32.61%), Postives = 167/322 (51.86%), Query Frame = 1
Query:  724 TLESSRIGKLYQAVTDEARPTSQFGGILVRCKEVLRPTQAGTASTPRWI---DVDGPSYMMK---IACKSLVLARAAIQGREPGNMWGEDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVL-----AAIPLAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPPWKSVS--DRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPW 1650
            TLE    G+L+      +   +Q    L+R    LRP   G       +   D DG  +M     +A K  ++ +  + GR       EDP KEI+ +Q L   G +PH+  +V+  ED++ +Y +  FCDGG+V      +   L E   +    ++L+ + + HA GV+HRD+S EN+L + R    +   +ID GM + +P   T   +L+  Q YCGK +YM+ E++      A A D+++ G  L+  L G+PP ++ +  D  F ++A EG L+ L+  W +D +SP A DLL G+L  +PR RL + + I  HPW
Sbjct:  117 TLEVVSQGRLHAVECLVSLAGTQAVYALIR---TLRPAIYGKVKLGMTLEARDADGSYHMSTERPVAVK--IVRKEKLGGRSQ-----EDPLKEISAMQYLGSPG-NPHVMGLVEVLEDEEHVYIVLPFCDGGEVCQWFERSRYMLREEVARGFFLQILSGLTYLHARGVVHRDMSLENLLYDQRT---KRCVIIDLGMCLHLPVPATS-DVLVRKQGYCGKLTYMSHEIYQNQDFYAAAVDIWALGVILFIMLTGIPPVETPAEIDPRFRMLA-EGRLSELMDLWRVDFLSPEARDLLVGLLQVDPRARL-TLEEIREHPW 421          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A835YUI9_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUI9_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.270e-31
Identity = 94/255 (36.86%), Postives = 140/255 (54.90%), Query Frame = 1
Query:  919 VLARAAIQGREPGNMWGEDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP----LAETEMQRIAHELLAAVAFCHA--CGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPR-DETGWPLLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPP--WKSVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFS 1656
            VL R  I+    G +  E+PY EIA +QL+   GGHP I  I  A  D+  +Y +  FC+GGD+   +     L E + + +  +L   +AF       ++HRD+S EN+L+    DG  ++ ++DFGM++ +PR +E G   L+  Q   GK SYM+PEVF E   DAKA D+++ G   Y  L+   P  W   +D+ F LIA    LA  L+ W  + VS  AADL+Q  L A+ ++R  + + +  HPW S
Sbjct:   97 VLYRDRIENSAIGLL--ENPYDEIAAMQLIAARGGHPSILPITAALRDENTIYLVLPFCNGGDLFDYVNEGGGLTEEQARPLFRQLADGLAFLQREDIAILHRDMSLENVLMH---DGA-ALLVMDFGMSIRLPRAEEPGVRALIPPQTRRGKRSYMSPEVFAEMPFDAKA-DVWALGVMCYVMLLRRLPYSWPHGNDQYFQLIAQRHELAVRLQQWGFN-VSAEAADLMQRCLMADAQQRPTAAE-LLQHPWIS 342          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: W7TKV7_9STRA (Protein kinase, catalytic domain protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKV7_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.590e-30
Identity = 84/246 (34.15%), Postives = 134/246 (54.47%), Query Frame = 1
Query:  970 EDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP-----LAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPR---------DETGWP-LLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPPWK--SVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFS 1656
            E+P  E+A LQ++  GGGH H++++++  EDD+ +Y +S F  GG++ A I      L E   +    ++L+ +AF H   + HRD+S ENIL++ + DGV    +ID GM + +P          D+   P +LL  Q  CGK +YM P V  +   D  A D+++CG  L+  L GVPP +  +++D  + +I   G L  L+  W +  +S  A  LL+ +L A P  R A  + +  HPW +
Sbjct:  138 ENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPFYQGGELFAVIEARGGGLPEARARTFFSQILSGLAFMHDRRLCHRDMSLENILVDGQ-DGV----IIDMGMCLRVPLPPALPPSHPDDPETPRVLLRKQGQCGKITYMDPVVLEDKDFDGFAVDMWACGVILFILLAGVPPLELPALTDPRYRMIQA-GKLGELMDVWEM-RISREAKHLLESLLKAVPEER-AKMEEVIRHPWLT 375          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A6U0UU60_9STRA (Hypothetical protein n=3 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UU60_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.080e-30
Identity = 81/237 (34.18%), Postives = 118/237 (49.79%), Query Frame = 1
Query:  970 EDPYKEIAVLQLLN-EGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP----LAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPPWKSVS---DRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFS 1656
            E+P+ EIA +  L+ + GGHPH+            L+ I  +C GG++ + I     L     + +  ++   V F     V HRD+S EN+LL  R +  R   LIDFGMA+ IPRD+ G    +  Q   GK  YM+PE+  +   D    D+++ G  L+  LVGVPPW+       R  C+  V G L  LL HW +  V   A DLL+ +   +   R+ S   I  HPW++
Sbjct:  126 ENPFNEIACMSFLHSQAGGHPHVLMYEALCRTQSHLFMIMPYCSGGELHSVIEENGALEPERARALFRQMTQGVEFLGRASVAHRDLSLENVLLHRRIEEERIAMLIDFGMALRIPRDKDGRCHWISRQLRAGKLHYMSPEIISQRPFDGSKIDVWALGVMLFIMLVGVPPWRMADRRDQRYICV--VSGELPRLLEHWGV-RVPGDAVDLLKRIFVEDIETRI-SIPEILRHPWYT 358          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A4D9CSW9_9STRA (Protein kinase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSW9_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.000e-30
Identity = 84/246 (34.15%), Postives = 135/246 (54.88%), Query Frame = 1
Query:  970 EDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP-----LAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPR---------DETGWP-LLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPPWK--SVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFS 1656
            E+P  E+A LQ++  GGGH H++++++  EDD+ +Y +S F  GG++ A I      L E   + +  ++L+ +AF H   + HRD+S ENIL++ + DGV    +ID GM + +P          D+   P +LL  Q  CGK +YM P V  +   D  A D+++CG  L+  L GVPP +  +++D  + +I   G L  L+  W +  +S  A  LL+ +L A P  R A  + +  HPW +
Sbjct:  261 ENPIDELAALQMVGAGGGHQHVQRLLECLEDDEAIYAVSPFYQGGELFAVIEARGGGLPEARARTLFSQILSGLAFMHDRRLCHRDMSLENILVDGQ-DGV----IIDMGMCLRVPLLPALPPSHPDDPETPRVLLRKQGQCGKITYMDPVVLEDKDFDGFAVDMWACGVILFILLAGVPPLELPALTDPRYRMIQA-GKLGELMDVWQM-RISREAKHLLESLLKAVPEER-AKMEEVIRHPWLT 498          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A6U3SFG7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SFG7_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.580e-29
Identity = 101/334 (30.24%), Postives = 159/334 (47.60%), Query Frame = 1
Query:  709 SAEHLTLESSRIGKLYQAVTDEARPTSQFGGILVRCKEVLRPTQA---GTASTPRWIDVDGPSYMMKIACKSLVLARAAIQGREPGNMWGEDPYKEIAVLQLL---------NEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP----LAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEAS-VDAKAADLFSCGTTLYACLVGVPPWK---SVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPW 1650
            S++    E  R   L + + +      +F  +L R K+  +        +AST  W        +   AC    L+   IQ RE G++  EDP  E++ +Q +         N      H+   +D   DD+ LY I  +C+GG++   +       E E +   H++LA + F    G+ HRD+S EN+L+        S  +ID GM + +PR+E G   L+  Q  CGK  Y++PE+       D  A D+++ G  L+  L G PPW+   S  DR   +    G+L  +L  W++  ++P A DLLQ MLW +PR RL S + + +HPW
Sbjct:  117 SSQQQYQEEERAYWLQRTLREAIYGEVKFAIVLRRRKDSSQSVDGDGMSSASTVEW-------EVTNEACAVKELSWQHIQ-RESGHL-AEDPRAEVSAMQYMKRYHDEMKANNEMMDNHVMMPMDLLTDDRNLYSIMPYCNGGELFDLLDERNRFPEEEARYWLHQILAGLEFLQRVGISHRDMSLENLLVHGS-----SCLIIDMGMCLLVPREE-GRRFLIRPQGTCGKWHYISPEIAHNRDPFDGYAVDMWAAGVILFLMLTGFPPWERPSSEDDRFKYM--TNGYLVQMLTEWDLG-LTPDAMDLLQRMLWLDPRDRL-SLEQVRAHPW 431          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A7S2E2Y0_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E2Y0_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.830e-27
Identity = 98/331 (29.61%), Postives = 158/331 (47.73%), Query Frame = 1
Query:  727 LESSRIGKLYQAVTDEARPTSQFGGILVRCK---EVLRPTQAGTASTPRWIDVDGPSYMMKIACKSLVLARAAIQGREPGNMWGEDPYKEIAVLQLL--------NEGGGHP----HIEKIVDAFEDDKFLYKISLFCDGGDVLAAIP----LAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLI-DFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFE-ASVDAKAADLFSCGTTLYACLVGVPPWK--SVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPW 1650
            +E  R   L + + +      ++  +L RC    +++     G  +T  W+       +   AC    L+   IQ RE G +  EDP  E++ +Q +        N G  +     H+   +D   DD+ LY I  +C+GG++   +      +E E +   H++LA + F    G+ HRD+S EN+L+          CLI D GM + +PR E     L+  Q  CGK +Y++PE+       D  A D+++ G  L+  L G PPW+  +  D  F  +   G+L  +L  W +  ++P A DLLQ MLW +PR RL S + + +HPW
Sbjct:  129 VEEERAYWLQRTLREAIYGEVKYAVVLRRCTAADQIVIGGVDGGGNTADWV-------VTNEACAVKELSWQHIQ-REQGKL-AEDPIAEVSAMQYIKRCLEANNNTGNNNNLMDNHVMLPMDLLTDDRNLYSIMPYCNGGELFDLLDERNKFSEGEARYWMHQILAGLEFLQRLGISHRDMSLENLLVHGGG------CLIIDMGMCLLVPR-EGNRRYLITPQGTCGKWNYISPEIAHNRVPFDGYAVDMWAVGVILFLMLTGFPPWERPTTDDERFKYMT-NGYLVQMLTEWELG-LTPDAMDLLQRMLWLDPRDRL-SLEQVLAHPW 440          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A6G0WTN8_9STRA (Protein kinase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTN8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.760e-26
Identity = 80/255 (31.37%), Postives = 129/255 (50.59%), Query Frame = 1
Query:  898 KIACKSLVLARAAIQGREPGNMWGEDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLA-AIPLAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEASVDAKAADLFSCGTTLYACLVGVPPWKSV--SDRLFCLIAVEGHLASLLRHWNIDHVSPAAA-DLLQGMLWANPRRRLASYDGIHSHPW 1650
            K+A K + L  A  +    G    ED   E  V ++ + G GHPHI +++D F+ D   Y +  +C+GG++    +P+      +   +++ A+ F H+ G  HRDIS EN+LL+++  G   VC  DFG+A  +            S    GK  YMAPE++          D+++ G  L   L G PP+     SD +F  +   G + S+LR W + H+ P  A DLL+ ML  +P +R+ + D + +HP+
Sbjct:   29 KVAIKRMQLDAATRRTSLQGASIAEDIEMEREVNRVASAGAGHPHIMRMLDDFQQDGMGYFVFEYCEGGELFQQTLPMEIMTTAKYFRQIVQAIVFLHSKGYAHRDISLENVLLDSQ--GNTKVC--DFGLATILNE---------RSNAIVGKAFYMAPEMYLRQGYMPAPVDVWALGILLLILLTGAPPFARANDSDTVFAYVKQHG-ITSVLRAWKVLHLIPLPALDLLEKMLVVDPSKRI-TMDELVAHPF 268          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: E4X0A1_OIKDI (Protein kinase domain-containing protein n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4X0A1_OIKDI)

HSP 1 Score: 116 bits (291), Expect = 5.180e-25
Identity = 73/231 (31.60%), Postives = 124/231 (53.68%), Query Frame = 1
Query:  985 EIAVLQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVLAAIPLA----ETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEASVDAKA--ADLFSCGTTLYACLVGVPPWKSVS---DRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPW 1650
            EIA+++L      HP+I ++V+ FE  + +Y +     GGD+  AI  +    E+    +  +L + +A+ HA  ++HRD+ PEN LLE   +G   + L DFG+A+ + +     P+       CG P+Y+APE+  E   +      D ++ G   Y  L G PP++S +   ++LF +I V G    +  +W  D +S  A DL++ +L  NP++RL + DG+ +H W
Sbjct:   28 EIAIMRLCR----HPNIIRLVEEFETLENIYLVLELVRGGDLFDAITESVRYDESVASSLIQDLASPIAYLHARNIVHRDVKPENCLLERHPNGKLQIKLADFGLAMEVTK-----PIF----QVCGTPTYVAPEILVEGGGNGYGLEVDNWAVGVIAYILLCGFPPFRSPNRDQNQLFDII-VRGEYEFISPYW--DDISQGAMDLIRQLLVINPKKRLTA-DGVLNHAW 241          
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Match: A0A7R9BUM7_9CRUS (Phosphorylase kinase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BUM7_9CRUS)

HSP 1 Score: 119 bits (299), Expect = 6.240e-25
Identity = 74/252 (29.37%), Postives = 125/252 (49.60%), Query Frame = 1
Query:  937 IQGREPGNMWGEDPYKEIAV--LQLLNEGGGHPHIEKIVDAFEDDKFLYKISLFCDGGDVL----AAIPLAETEMQRIAHELLAAVAFCHACGVMHRDISPENILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAPEVFFEASVDA-----KAADLFSCGTTLYACLVGVPPWKSVSDRLFCLIAVEGHLASLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFSL 1659
            + G+EPG+    D  +E  +  + +L E  GHP+I ++ D +E D F++ +   C  G++     + + L+E + + I  +L  A++F H   ++HRD+ PEN+LL+   +    V L DFG A  +  DE       +    CG P Y+APE+   A  +      KA D+++CG  +Y  LVG PP+      +     +EG        W  D V+ +  DL+Q +L   P +R+ + D    H +F +
Sbjct:   57 LAGQEPGD---SDALRESTLREISILREVAGHPYIIELHDVYESDTFIFLVFELCKNGELFDYLTSVVTLSEKKTKYIMKQLFEALSFVHRKNIVHRDVKPENVLLDDNFN----VKLTDFGFARKLKDDE-------KLHEVCGTPGYLAPELLKSAMFEDEGGYDKAVDVWACGVIMYTLLVGCPPFWHRKQMVMLRNIMEGRFTFSSPEW--DDVTDSPKDLIQKILITEPAKRI-TIDEALDHEFFQI 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig119.7.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9CSS4_9STRA3.920e-3532.61Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A835YUI9_9STRA3.270e-3136.86Kinase-like domain-containing protein n=1 Tax=Trib... [more]
W7TKV7_9STRA1.590e-3034.15Protein kinase, catalytic domain protein n=2 Tax=N... [more]
A0A6U0UU60_9STRA3.080e-3034.18Hypothetical protein n=3 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CSW9_9STRA7.000e-3034.15Protein kinase domain-containing protein n=1 Tax=N... [more]
A0A6U3SFG7_9STRA1.580e-2930.24Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2E2Y0_9STRA4.830e-2729.61Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6G0WTN8_9STRA1.760e-2631.37Protein kinase domain-containing protein n=1 Tax=A... [more]
E4X0A1_OIKDI5.180e-2531.60Protein kinase domain-containing protein n=1 Tax=O... [more]
A0A7R9BUM7_9CRUS6.240e-2529.37Phosphorylase kinase n=1 Tax=Notodromas monacha Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig119contigP-wetherbeei_contig119:5526..9984 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTS8
PFAMsPkinase
Model size3791
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.75e-36
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota
EC2.8.1.8
Descriptionprotein serine/threonine kinase activity
Cds size1104
COG categoryG
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig119.7.4prot_P-wetherbeei_contig119.7.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig119 6427..7729 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185930.5376806-UTR-P-wetherbeei_contig119:5525..60561683185930.5376806-UTR-P-wetherbeei_contig119:5525..6056Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig119 5526..6056 +
1683185930.546351-UTR-P-wetherbeei_contig119:6245..63191683185930.546351-UTR-P-wetherbeei_contig119:6245..6319Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig119 6246..6319 +
1683185930.5537164-UTR-P-wetherbeei_contig119:6407..64261683185930.5537164-UTR-P-wetherbeei_contig119:6407..6426Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig119 6408..6426 +
1683185930.575987-UTR-P-wetherbeei_contig119:7729..79661683185930.575987-UTR-P-wetherbeei_contig119:7729..7966Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig119 7730..7966 +
1683185930.5831962-UTR-P-wetherbeei_contig119:8158..99841683185930.5831962-UTR-P-wetherbeei_contig119:8158..9984Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig119 8159..9984 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185930.5610025-CDS-P-wetherbeei_contig119:6426..70101683185930.5610025-CDS-P-wetherbeei_contig119:6426..7010Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig119 6427..7010 +
1683185930.5685081-CDS-P-wetherbeei_contig119:7209..77291683185930.5685081-CDS-P-wetherbeei_contig119:7209..7729Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig119 7210..7729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig119.7.4

>prot_P-wetherbeei_contig119.7.4 ID=prot_P-wetherbeei_contig119.7.4|Name=mRNA_P-wetherbeei_contig119.7.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp
MAEPGRAQCFPAKSPPFQAAYIGRASMVSAEHLTLESSRIGKLYQAVTDE
ARPTSQFGGILVRCKEVLRPTQAGTASTPRWIDVDGPSYMMKIACKSLVL
ARAAIQGREPGNMWGEDPYKEIAVLQLLNEGGGHPHIEKIVDAFEDDKFL
YKISLFCDGGDVLAAIPLAETEMQRIAHELLAAVAFCHACGVMHRDISPE
NILLETRADGVRSVCLIDFGMAVSIPRDETGWPLLLESQHYCGKPSYMAP
EVFFEASVDAKAADLFSCGTTLYACLVGVPPWKSVSDRLFCLIAVEGHLA
SLLRHWNIDHVSPAAADLLQGMLWANPRRRLASYDGIHSHPWFSLTTRCT
GEGGTGDDAALAVPQAV*
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mRNA from alignment at P-wetherbeei_contig119:5526..9984+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig119.7.4 ID=mRNA_P-wetherbeei_contig119.7.4|Name=mRNA_P-wetherbeei_contig119.7.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4459bp|location=Sequence derived from alignment at P-wetherbeei_contig119:5526..9984+ (Phaeothamnion wetherbeei SAG_119_79)
GAGTTATTGTTCATATGTGGTCTATTGTTCCATCTTGACACATTTTTCCT TAAAAATGAAAGCAAAAGACAATCGCCATCTTCAGGTTATTTTTAGGCTG ATAGGAACGGCCATTGTAATCGGGTTGCTCATCCTTTCATATCTGGTCTA TTGTTCCATCTTGACACCTTTGTCCTTAAAAAATGAAAGCAAAAGACGAT CGCCATCTTCAGGTTATTTTTAGGCTGATAGGAACGGCCATTGTAATCGG GCTGCTCATCCTCAGGAGAAAGGTGGTTGTACCACTCAGAAATAGAAGTG TTTGGGTTGCACAGAAGCGAGTGCGAACGTGCGCATACATCCATCAAACC TCAGCGGATTGAAAAAAACATGTCACGTACGCATGTTCAGCTGTCCTGAT GTCACAGAATGTCAAAGGGTCTGGCGTAAAGGTACGGCGCATACTTTTCT GAGTTCGTGCTTCAACAACGTCACCAGTTGCCTTTGAGCCCAAACCAGAA AACCAACTTCAGTCACCTGTTGTCAACTCAGGTTAGTAAGCTAGAAAGGA CGGGTGGTAAAATCATGTTAGATTGCTCAATCCCATGGCTCCGCTCTCCA TTGATTGATTTTTGGCACCGGACCTGTGCTCATCCTTTCTTCAACTGGTG GGGCTAGTTTACGCACTCGCGTCTCAACTCACTCCCGTGGCATCAACTCT TTCATACGTTGTCCCTGCAGGCTGTTTAAACGCGGCCATTTTTGCAATGT TTGCTCCAGGCTCGGTATACTTCTTGCATCTTCTCATTTGCCTGGTAAGC CAGCCCCTACAAATTTTGTCTTCATTAGCTGGCGCGCACCTTTGTTAAGC GTTGATACCCCGCTCTCTACTATTTGTGTCAGGGAACAAAGGCATGTCAC CATGGCAGAGCCTGGGAGAGCGCAATGCTTTCCCGCAAAATCTCCCCCAT TTCAAGCTGCTTACATTGGGCGTGCATCAATGGTGAGTGCAGAGCATCTA ACGCTGGAAAGCTCCCGGATTGGAAAGCTTTACCAAGCCGTGACTGATGA AGCGCGCCCGACATCGCAGTTTGGCGGAATTCTCGTGAGATGTAAAGAAG TTTTACGACCCACCCAGGCGGGCACTGCATCGACGCCTCGCTGGATTGAC GTCGACGGCCCTTCGTACATGATGAAGATCGCATGTAAAAGTCTGGTACT CGCTCGCGCAGCAATACAGGGACGCGAACCAGGCAACATGTGGGGCGAAG ACCCATACAAGGAGATTGCGGTGCTCCAGCTCCTCAACGAGGGAGGCGGC CACCCTCACATAGAGAAGATCGTGGACGCATTTGAGGACGACAAGTTCCT GTACAAAATATCTTTGTTTTGCGATGGCGGCGATGTGCTCGCTGCTATAC CGCTGGCAGAGACAGAGATGCAGCGCATCGCCCATGAGCTCTTGGCTGCA GTGGCATTCTGCCACGCCTGCGGCGTCATGCACAGGTGACGTGGTTTGGG CAATTAGTCTATGGGATGACGTGTCTTGGCATTTTTTGAACATTTTACCA TCGTACGAGAAGTAATTCAATAGATGGTCACACCTCCGCAATCTTGCCCC ACTTTCACTGTAACATGTCTTTCACGGATCATGGCCGCCACTCCAAAATT CGTCTCTCGTACTGGCTGTCCCTCAAATCTGCAGGGACATTTCGCCAGAG AATATCCTGTTGGAGACACGGGCTGATGGTGTGAGGTCGGTGTGCCTCAT CGACTTTGGCATGGCCGTGAGCATTCCCCGCGACGAGACCGGCTGGCCGC TGCTGCTGGAGTCACAACATTACTGTGGAAAACCATCGTATATGGCACCA GAGGTTTTTTTTGAGGCGTCTGTGGACGCCAAAGCTGCGGACCTGTTCTC GTGTGGGACGACGCTTTACGCGTGTCTCGTAGGGGTTCCGCCGTGGAAAT CGGTCAGCGATAGGCTCTTTTGCCTGATCGCCGTCGAGGGCCACCTGGCA TCGCTGCTCCGCCACTGGAACATCGACCATGTGTCACCGGCGGCCGCTGA CCTGCTGCAGGGCATGCTGTGGGCCAATCCACGGCGCCGTCTGGCAAGTT ACGACGGTATCCATTCGCACCCGTGGTTCTCACTGACGACGCGCTGTACC GGTGAAGGTGGCACTGGTGACGATGCGGCACTGGCAGTACCTCAGGCGGT ATAAACCATCAGCGGCAAATTTCTGTTTTTAAATTTTCAATTTTCAAAAA ACGATGTATCGATATTTTCATGTACGTACTGTACTTAAATTTTCAGTCCA AACTGGTCGTTCTTCACGAAATTCGATGCCGTTGCAAGACCCACTTGCTG GATGTGATGGATTGCCCTGCCGACAGCCATACCGCTGCCTACAACACAGG TAAAATAATAAGAAGCATTCACCACAAACGAGGCGCTGGAGGTACGTACC TTTTGTTTCTGTGTTTGGGGGCTCGCACACACATTTGCCTCTTGAGCTGC CAGGGTGGTTAGCAGCATCTGGAGCTCTGTTTTTCCCCTTGGATACCTTC CTTCACCCCTTCCTCGCGAAACGCGACTTGCTTCAGCGCGCTGCTCATGC GCTCGCCGTCTGCTGCCTGCTGCTGTTTTGCAGAGCTTTTCGCTAAGACG ACAAGATCGGCCCGAGAAGGTTGCGGTCATCTGTCGGCGCGGCAGCCATG GCAAAGGGCCGCTGGGATCTGGTGTCGCAGCCCAAGTACCGCCACATCCT GGACCTCCGCTACTAGATGCACGCCTTCAACCTGCTGTACGGCGCATTCT TCGGGCATCCCGTCCGCAAGAGCATCATGCGGACCGCCTAGATCGTCGTG TTTGTACGTGCCTCGCACAAGGTCGGCGGGCTCGTGCGCCAGAAGGCGAG AGAGATGAGCAAGAGGTTGCTTGCTGCCCTCAAGACTCAAGACATCCAAG AAGACACGGTTCACCTCCGGTGAAGAGGGTCTTTGTTCCATTGCAGAGCT CGAAGACATGCTGCAGAGCGTCTGTGAGGATGCGCCTGCTCTCTCCCGGC TCAAGCCAGAGCTCCTCGCTGTGCTGCCTCTCCGACCGCTGGCATGACTT CTGGCGTCAGCTTCGTGAGTTTCTCAAGCTGCTGCTGCCCATCAGCAAGT CATCACGATGTGCAGTCCGATGAGTGCACGCTCGCCGACATCACGCGCTT CTGGCTCTACCTCGCCAGCCAAGGACCTAGTGGGCGCTGGCTGCATCCAA GCTGGTTTCTGAGTACATTTCACACGCGGCGGCTCAGTACATTCGGCGCG TGCAGGCCCTCCACCTGGATCTGCACCGGCTGACGCTCTTCCTGGATCCA ACTCACAAGCTGGTCGGCGCGGGTGGCGGCGATGAGACCAAGTTCAAAGC CATTGCTAATGCAGTATGCGAGCGTGAATGTTCCCCGCAGAAATTGGTCA AGCTCATTCAGCAGATGCGGGCCTATCGGGCGTTGCGCCATTTGACGTGG CATGCGAGGGCCGCGGCCGTGGTGCTGCACGTGCGTGGTGGATCCACGTC GGACAGGCTCCCGGAGGCGACCTCATTTCCGAGCTCGCCGTCGTGCTGCT GGATGTGGTCCCCCATGCTGCCGCCCCGGAGCGCACCTTCAGCTTGCTGG ACTGGCTGCAGTCGGAGCGCCGCAACCGGATAAACGTGGCGACGATGGGC GCTCTGGCGGTCAAGGTGCATCACCTTCAGGAGGGGGGCCCCCGCCTCCT GGCAAATGCTCGGGATAAGCCGCCGCCATCCAAGAAGGCGAGAACGTTGG CGGCAGCGGCATCACCCCACGATACCGAGTGTCTCCACGGTGATGACGAG GAGAGCAGAGATAATGCTTCGGGTACAGCAAGCGGCGCAACTCCGTTCAA GGCGGCAGGGGGCCCGGATGGCGATGATCCCGAAGGTGATGTTTTGGCTG AGAGGGACTTGGCGGAGCTTTTCACGGTCTTTGACGCGCGCATTGTTCAT GCGGACGAGGAGGTCGTACAGGCTGGTCAGCCAAGCGTGGAGGGCATGGT CGGGCTCTGGGGGTACATTGGCATTGACCAACCATGCCGACCTCGCGCCC GACGTCCAGACCCCCGCCGCGCGCCCAATCACCATGTTTGGCGAAGCTGC GGAGTTTGACGCCAATCTGAACGTTGGCGACCTCGTGGCTGGACTGTTCG CTCCGAGTGACGCTACAGCCACATTGTCACCTGGTAGTGGGGAAGGGGCG GCGTTCTCCTGAGGCCGTGAATGGAGCCACGACAGCGTGTCAGCGTGTGG CAAGTGTCTCTGCATGCGCTAGTTGCGCTCCCGAGAAAAAACAAATAACT ACATGGTTAAAACCATTAACCAGAGTGCTTTTTAACCTTAACAATAACCA CCGATAGCCGCGTACACTGCAAGAGAGCACATTTTGCATGTCAATGAAGG GGAGACGAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig119:5526..9984+

>mRNA_P-wetherbeei_contig119.7.4 ID=mRNA_P-wetherbeei_contig119.7.4|Name=mRNA_P-wetherbeei_contig119.7.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig119:5526..9984+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAGAGCCTGGGAGAGCGCAATGCTTTCCCGCAAAATCTCCCCCATT
TCAAGCTGCTTACATTGGGCGTGCATCAATGGTGAGTGCAGAGCATCTAA
CGCTGGAAAGCTCCCGGATTGGAAAGCTTTACCAAGCCGTGACTGATGAA
GCGCGCCCGACATCGCAGTTTGGCGGAATTCTCGTGAGATGTAAAGAAGT
TTTACGACCCACCCAGGCGGGCACTGCATCGACGCCTCGCTGGATTGACG
TCGACGGCCCTTCGTACATGATGAAGATCGCATGTAAAAGTCTGGTACTC
GCTCGCGCAGCAATACAGGGACGCGAACCAGGCAACATGTGGGGCGAAGA
CCCATACAAGGAGATTGCGGTGCTCCAGCTCCTCAACGAGGGAGGCGGCC
ACCCTCACATAGAGAAGATCGTGGACGCATTTGAGGACGACAAGTTCCTG
TACAAAATATCTTTGTTTTGCGATGGCGGCGATGTGCTCGCTGCTATACC
GCTGGCAGAGACAGAGATGCAGCGCATCGCCCATGAGCTCTTGGCTGCAG
TGGCATTCTGCCACGCCTGCGGCGTCATGCACAGGGACATTTCGCCAGAG
AATATCCTGTTGGAGACACGGGCTGATGGTGTGAGGTCGGTGTGCCTCAT
CGACTTTGGCATGGCCGTGAGCATTCCCCGCGACGAGACCGGCTGGCCGC
TGCTGCTGGAGTCACAACATTACTGTGGAAAACCATCGTATATGGCACCA
GAGGTTTTTTTTGAGGCGTCTGTGGACGCCAAAGCTGCGGACCTGTTCTC
GTGTGGGACGACGCTTTACGCGTGTCTCGTAGGGGTTCCGCCGTGGAAAT
CGGTCAGCGATAGGCTCTTTTGCCTGATCGCCGTCGAGGGCCACCTGGCA
TCGCTGCTCCGCCACTGGAACATCGACCATGTGTCACCGGCGGCCGCTGA
CCTGCTGCAGGGCATGCTGTGGGCCAATCCACGGCGCCGTCTGGCAAGTT
ACGACGGTATCCATTCGCACCCGTGGTTCTCACTGACGACGCGCTGTACC
GGTGAAGGTGGCACTGGTGACGATGCGGCACTGGCAGTACCTCAGGCGGT
ATAA
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