mRNA_P-wetherbeei_contig11576.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: D8LJ58_ECTSI (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ58_ECTSI) HSP 1 Score: 210 bits (535), Expect = 1.770e-64 Identity = 110/234 (47.01%), Postives = 152/234 (64.96%), Query Frame = 1 Query: 28 LAKAAASGGVGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAPRALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGLCAAC 729 L + A+ G + ++LLRFLRKEK+RRPDL + +G LL R+LGDE+W ++EQ+ AALD+ A++ + L KFPG+ RVR L GM G F AA +I + ++ NPAN LA K Q+A A+ A ++ LN YL FA D +AW +LA+L G NY AAAFCYEELVL++P HCRL E+Y+T GG++N+++ARK F+ S++ + GN R L GLC C Sbjct: 9 LCREASGGKLSPLRDLLRFLRKEKIRRPDLCLQYGKQLLTYGRSLGDELWVIHEQMVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAVLIAKGDTAGAVKALNGYLAEFAADGEAWLQLAKLHIGALNYAAAAFCYEELVLVAPSDHVVHCRLGEVYYTMGGAENLMRARKHFSQSVDLLKAGNARGLHGLCQTC 242
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: A0A7S2CCR7_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCR7_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.840e-62 Identity = 111/225 (49.33%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 55 VGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAPRALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGLCAAC 729 V + Q LL+ +R K+R ++V+ HG L++ ALGDE W+V EQVF AALD +A C+ AL +FP +TRV+ L G+ G + AE I K +L ENPAN L +K Q+ KAQNK I+ LN YL+ F D +AWQELA+L + YEAAAFCYEELVL +P S +HCRL E+Y+T GG ++ KARK FA SLE + N RAL GL A C Sbjct: 23 VPAAQALLKHIRMAKMRESEMVVRHGSKLVERQAALGDEYWSVLEQVFLAALDVDERSLAQTCLQALNEQFPESTRVKRLVGISREAMGKYAEAEEIYKGMLEENPANQLVLKRQVCVLKAQNKIPAAIKCLNNYLKQFQADANAWQELADLYLSVSKYEAAAFCYEELVLANPTSHINHCRLGEIYYTLGGK-HIAKARKYFAQSLELKKTNNARALHGLAACC 246
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: A0A7S2GPJ3_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPJ3_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.870e-55 Identity = 106/233 (45.49%), Postives = 144/233 (61.80%), Query Frame = 1 Query: 34 KAAASGGVGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAPRA-LGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGLCAAC 729 +AA +G L +FLR K+R+ V+ G +L+ R+ +GDE+WTV EQV AALD +++ +C+ L+ KFP + RV+ L GM + G++ AA+ I K +L ENPAN LAMK Q+ KAQ IR LN YL TF D AWQEL E+ + YEAA FCYEEL+L +P + HHCRL ELY+T G ++ ARK FA SL+ ++GN RA+ GL + C Sbjct: 2 RAAETGRPAPILNLFKFLRINKLRQTRDVVRWGRVVLEKYRSHMGDELWTVLEQVMIAALDLHDTELSKECLKELQTKFPESARVKRLEGMQSEALGEWGAAKEIYKQMLEENPANTLAMKRQVCVLKAQGNYPQAIRQLNEYLSTFGADTSAWQELGEMYMAISKYEAAVFCYEELILSNPTNHIHHCRLGELYYTLGPK-HLRTARKYFAQSLDLKKDGNLRAMHGLASCC 233
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: W2QL82_PHYPN (ER membrane protein complex subunit 2 n=9 Tax=Phytophthora TaxID=4783 RepID=W2QL82_PHYPN) HSP 1 Score: 187 bits (475), Expect = 5.440e-55 Identity = 108/231 (46.75%), Postives = 138/231 (59.74%), Query Frame = 1 Query: 28 LAKAAASGGVGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAPR-ALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGL 717 LA A SG ELL ++RKEK+R P V + G L+ LGDE+W VYEQ F AALD D++A C+ AL+ KFPG++RV L GM G+F A + +L NPAN L +K +IA KAQ K A V+ LN +L++F D AW EL E +G Y AAFCYEELVLL+P H RLA++Y T GG DN+L ARK +A S+E ++ N RA L Sbjct: 10 LATAERSGARDKCVELLHYVRKEKLREPRAVASIGKLLVTKHSWGLGDELWGVYEQTFVAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQRGEFAKALVLYAELLEANPANALVLKRKIAVLKAQKKTAEVVTALNEFLKSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLADIYSTIGGLDNLLTARKHYAHSIELNKKQNLRAYFSL 240
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: M4BV78_HYAAE (ER membrane protein complex subunit 2 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BV78_HYAAE) HSP 1 Score: 187 bits (475), Expect = 5.750e-55 Identity = 105/217 (48.39%), Postives = 132/217 (60.83%), Query Frame = 1 Query: 70 ELLRFLRKEKVRRPDLVIAHGIPLLDAPR-ALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGL 717 ELLR++RKEK+R V G L+ R LGDEVWTVYEQ F AALD D+++ C+ AL+ +FPG++RV L GM +F A ++ +L NPAN L K +IA KAQ K VI LN +L F D AW EL E +G Y AAFCYEELVLL+P +H RLA++Y T GG DN+LKARK +A SLE ++ N RA L Sbjct: 24 ELLRYVRKEKLRESRAVSRTGKLLVTKHRRGLGDEVWTVYEQTFIAALDVHDDELSETCLKALQGQFPGSSRVARLEGMQLEQRNEFTKALTLYDQLLGANPANALVFKRKIAVLKAQKKTMDVIAALNEFLRCFGTDQTAWTELGETYLSIGTYRYAAFCYEELVLLNPMDAIYHSRLADIYSTIGGLDNLLKARKHYAHSLELNKKQNLRAYFAL 240
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: A0A3M6V6N0_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6N0_9STRA) HSP 1 Score: 187 bits (475), Expect = 7.200e-55 Identity = 105/219 (47.95%), Postives = 134/219 (61.19%), Query Frame = 1 Query: 70 ELLRFLRKEKVRRPDLVIAHGIPLLDAPR-ALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGLCA 723 ELL ++RKEK+R P V + G L+ LGDE+WTVYEQ F AALD D+++ C+ AL+ KFPG++RV L GM +F A ++ +L NPAN L K +IA KAQ K A V+ LN +L +F D AW EL E +G Y AAFCYEELVLL+P H RLA++Y T GG DN+LKARK +A SLE ++ N RA L A Sbjct: 24 ELLHYVRKEKLREPHAVASIGKLLVTKHSWGLGDELWTVYEQTFIAALDLHDDELSETCLKALQTKFPGSSRVARLEGMQLEQRREFTKALALYDELLEANPANALVFKRKIAVLKAQRKTADVVTALNEFLRSFGTDQTAWTELGETYLSIGTYRYAAFCYEELVLLNPMDAISHSRLADIYATIGGLDNLLKARKHYAHSLELNKKQNLRACFALVA 242
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: H3HDU6_PHYRM (ER membrane protein complex subunit 2 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HDU6_PHYRM) HSP 1 Score: 186 bits (472), Expect = 1.530e-54 Identity = 106/232 (45.69%), Postives = 143/232 (61.64%), Query Frame = 1 Query: 34 KAAASGGVGSKQ---ELLRFLRKEKVRRPDLVIAHGIPLLDAPR-ALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGL 717 K AA+ G G+++ ELL+++R+EK+R P V G L+ LGDE+W+VYEQ AALD D++A C+ AL+ KFPG++RV L GM G+F A ++ +L NPAN+L +K +IA KAQ K A V+ LN L +F D AW EL E +G Y AAFCYEE+VLL+P H RLA++Y T GG DN+L ARK +A S+E ++ N RA GL Sbjct: 9 KLAAAEGSGARERCVELLQYVRREKLREPRAVARVGQLLVTKHSWGLGDELWSVYEQTLVAALDLHDDELADTCLTALQRKFPGSSRVARLEGMRLEQRGEFVKALALYDELLESNPANMLVLKRKIAVLKAQKKTADVVAALNELLRSFGSDLAAWTELGETYLSMGAYRYAAFCYEEMVLLNPMDAISHSRLADIYSTVGGLDNLLTARKHYAHSIELNKKQNLRAYFGL 240
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: A0A0N7L4P2_PLAHL (ER membrane protein complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4P2_PLAHL) HSP 1 Score: 185 bits (469), Expect = 4.090e-54 Identity = 103/217 (47.47%), Postives = 136/217 (62.67%), Query Frame = 1 Query: 70 ELLRFLRKEKVRRPDLVIAHGIPLL-DAPRALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGL 717 +LL ++RKEK+R+P +V + G L+ + R LGDE+W VYEQ F AALD D++A C+ AL+ KFPG++RV L GM G+F A ++ +L NPAN L +K +IA KAQ K VI LN +L +F D AW EL E LG Y AAFCYEELVLL+P H RLA++Y T GG + +L ARK +A S+E ++ N RA L L Sbjct: 22 DLLYYIRKEKLRKPQVVASIGKLLVAEHHRGLGDELWNVYEQTFIAALDLHDDELATTCLQALQTKFPGSSRVARLEGMQLEQRGEFAKALALYAELLEANPANALVLKRKIAIYKAQKKTTDVIMALNEFLRSFGTDLAAWTELGETYLSLGAYRYAAFCYEELVLLNPMDAIAHSRLADIYSTIGGLEYLLTARKHYAHSIELNKKQNLRAFLAL 238
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: A0A7S2S8F2_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8F2_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.490e-53 Identity = 105/223 (47.09%), Postives = 136/223 (60.99%), Query Frame = 1 Query: 73 LLRFLRKEKVRRPDLVIAHGIPLLDAP--RALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGLCAACVA 735 LL+++R K+R LV+ +G PL+ ALGDE WTV EQVF AALDT D+A C+ L +FP + RV+ L GM + D+ AA I +L NPAN LAMK +I +A NK I LN Y++ F D AWQELA+L + Y++AAFCYEEL+L +P S HCRL E+Y+T G +N+ ARK F SLE R+ N RAL GL + C A Sbjct: 29 LLKYIRTHKLRESKLVVQYGKPLVQGGGGSALGDEKWTVLEQVFIAALDTKDMDLADACLRGLHTQFPDSARVKRLVGMKSEAERDYTAALQIYDELLEANPANQLAMKRKICILRADNKVQSAIHELNEYIKRFQADASAWQELADLYLSVAKYDSAAFCYEELILHNPMSHLLHCRLGEIYYTLG-KENLTVARKHFCKSLELKRKDNPRALHGLRSCCSA 250
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Match: D0NVY1_PHYIT (ER membrane protein complex subunit 2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NVY1_PHYIT) HSP 1 Score: 182 bits (461), Expect = 6.870e-53 Identity = 105/231 (45.45%), Postives = 137/231 (59.31%), Query Frame = 1 Query: 28 LAKAAASGGVGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAPR-ALGDEVWTVYEQVFKAALDTARDDVAYKCIGALEAKFPGTTRVRLLTGMHAAYHGDFEAAESINKAILAENPANVLAMKLQIASAKAQNKPAVVIRLLNTYLETFAGDPDAWQELAELQAGLGNYEAAAFCYEELVLLSPRSPHHHCRLAELYHTAGGSDNVLKARKQFAVSLECCREGNTRALLGL 717 LA A SG ELL ++RKEK+R V G L+ +GDE+W++YEQ F AALD D++A C+ AL+ KFPG++RV L GM G+F A ++ +L NPAN L +K +IA KAQ K A VI LN +L +F D AW EL E +G Y AAFCYEELVLL+P H RL ++Y T GG +N+LKARK +A S+E ++ N RA L Sbjct: 10 LAAAERSGARDKCVELLHYVRKEKLRESQAVATIGKLLVTKHSWGVGDELWSIYEQTFIAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQSGEFAKALALYAELLEANPANALVLKRKIAVLKAQKKAADVIIALNEFLRSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLGDVYSTIGGLENLLKARKHYAHSIELNKKQNLRASFSL 240 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11576.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11576.1.1 >prot_P-wetherbeei_contig11576.1.1 ID=prot_P-wetherbeei_contig11576.1.1|Name=mRNA_P-wetherbeei_contig11576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=245bp MTTPQEATALAKAAASGGVGSKQELLRFLRKEKVRRPDLVIAHGIPLLDAback to top mRNA from alignment at P-wetherbeei_contig11576:854..2105- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11576.1.1 ID=mRNA_P-wetherbeei_contig11576.1.1|Name=mRNA_P-wetherbeei_contig11576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1252bp|location=Sequence derived from alignment at P-wetherbeei_contig11576:854..2105- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11576:854..2105- >mRNA_P-wetherbeei_contig11576.1.1 ID=mRNA_P-wetherbeei_contig11576.1.1|Name=mRNA_P-wetherbeei_contig11576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=735bp|location=Sequence derived from alignment at P-wetherbeei_contig11576:854..2105- (Phaeothamnion wetherbeei SAG_119_79)back to top |