mRNA_P-wetherbeei_contig11570.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A7X9KK43_9ACTN (OB-fold nucleic acid binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KK43_9ACTN) HSP 1 Score: 173 bits (438), Expect = 9.350e-54 Identity = 82/116 (70.69%), Postives = 100/116 (86.21%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 MGLRDLAKRL+ +V+ELDD RLQ+RF+GLG+T + + RTPVRVGGE+ RMR+APRSGV AFE+T+ DG+G VAVFTGRR +AG+ HNRA+VLEGVAR ER RL+MLNPAYTL+ Sbjct: 1 MGLRDLAKRLRTSVDELDDRRLQDRFSGLGLTCIGEMTARTPVRVGGEITRMRVAPRSGVQAFEVTIDDGTGTAVAVFTGRRHLAGVEHNRAVVLEGVARAERGRLMMLNPAYTLL 116
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A6I3EXE4_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EXE4_9ACTN) HSP 1 Score: 162 bits (409), Expect = 2.450e-49 Identity = 78/116 (67.24%), Postives = 95/116 (81.90%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 MGLRDLAKRL +VE++DDERLQ+RF L VT + AV PRT R+GGE+ R RI PRSGVP+FEI++SDG+G VAVFTGRR + G+ H+RA+VLEGV R ER R+VMLNPAYTL+ Sbjct: 1 MGLRDLAKRLSVSVEQIDDERLQDRFTNLDVTKIGAVTPRTQSRIGGEITRTRITPRSGVPSFEISISDGTGTAVAVFTGRRHMPGLEHHRAVVLEGVPRSERGRMVMLNPAYTLL 116
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A6I3X2C6_9ACTN (DNA-binding protein n=2 Tax=root TaxID=1 RepID=A0A6I3X2C6_9ACTN) HSP 1 Score: 155 bits (391), Expect = 1.390e-46 Identity = 75/117 (64.10%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLIA 351 MGLRDLA RLKA EELD ERL +RF G+ +T + + RTP RVGGEV+R+R+APR G+PA E+ ++DG+ DVVAVFTGRR +AGI H RA+++EG+AR ER R VMLNPAYTLI+ Sbjct: 2 MGLRDLANRLKAKPEELDAERLHDRFGGMDLTPIDQLECRTPSRVGGEVKRIRVAPRKGIPALEMVLTDGTADVVAVFTGRRHIAGIEHGRAVIIEGIAREERGRKVMLNPAYTLIS 118
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: UPI000E350D42 (OB-fold nucleic acid binding domain-containing protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E350D42) HSP 1 Score: 139 bits (351), Expect = 1.510e-40 Identity = 67/111 (60.36%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 16 LAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 L +RL+A+VEEL+ RL +RFAGL ++ +S V PR P+RVGGE+ R+ IAPR GVP E+ +SDGSG + AVFTGRR + GI H RA++LEGVA ER+R V+ NPAYTLI Sbjct: 4 LGQRLRASVEELERTRLSQRFAGLDLSPLSGVVPRRPIRVGGEISRVVIAPRHGVPTLEVMISDGSGSITAVFTGRRSIGGIEHGRAVILEGVAVPERDRNVIFNPAYTLI 114
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: UPI001AA04D50 (OB-fold nucleic acid binding domain-containing protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA04D50) HSP 1 Score: 130 bits (326), Expect = 1.020e-36 Identity = 62/111 (55.86%), Postives = 83/111 (74.77%), Query Frame = 1 Query: 16 LAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 + +RL A+V++LD RLQER+ GLG+T + R PVRVGGE+Q R+ PR+G PA E+T+SDG+G VFTGR+ + G++ R +VLEGVAR ER RLV+LNPAYTL+ Sbjct: 7 IRQRLTASVQQLDQARLQERYQGLGLTPIGEAPLREPVRVGGEIQESRLVPRAGSPAVEVTISDGTGRATGVFTGRKVLHGVTLGRGMVLEGVARTERGRLVLLNPAYTLL 117
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A7W1CPE9_9ACTN (OB-fold nucleic acid binding domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1CPE9_9ACTN) HSP 1 Score: 127 bits (319), Expect = 1.180e-35 Identity = 65/116 (56.03%), Postives = 83/116 (71.55%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 MG R L +RL ++V ELD RLQ+R L VT + + R PVRVGGEV+R+ APR+GVP FE+ +SDG+G+V AVF GRR++ GI H RA+VLEGVA R V+ NPAYTL+ Sbjct: 1 MGHRTLRQRLGSSVSELDRTRLQDRCRDLAVTPLDRLPHRVPVRVGGEVKRVMHAPRNGVPNFEVMISDGAGEVTAVFAGRRRIPGIEHGRAIVLEGVALEVRGHCVIYNPAYTLV 116
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A0R2QX74_9ACTN (Uncharacterized protein n=5 Tax=root TaxID=1 RepID=A0A0R2QX74_9ACTN) HSP 1 Score: 124 bits (312), Expect = 1.540e-34 Identity = 60/116 (51.72%), Postives = 81/116 (69.83%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 MGL+++ K + ELD ERL +RFA L +T + VA RT V+V GEV+RM + PRSG+P+ EI ++DG+G V +F+GRR ++GI H L +EGVA ERN V LNPAYTL+ Sbjct: 1 MGLKNIVKSANKGIRELDAERLVDRFAELNLTPLGEVAVRTKVKVCGEVKRMTMKPRSGIPSMEIVINDGTGQVTVIFSGRRHISGIEHGGCLAVEGVAHRERNSTVFLNPAYTLL 116
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A7K1DIJ7_9ACTN (Uncharacterized protein n=8 Tax=root TaxID=1 RepID=A0A7K1DIJ7_9ACTN) HSP 1 Score: 120 bits (301), Expect = 6.430e-33 Identity = 55/117 (47.01%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLIA 351 MG+R KRL A +E+D +RL +RF G T++ + RT ++ GEV+RMR PRSG+PA E+ +SDG+GD V +F+GRR + GI R ++++GV + +R V+LNPAYTL+A Sbjct: 1 MGIRSFGKRLNADTQEIDTQRLCQRFKDTGFTSLEDLQLRTRTKIAGEVKRMRTKPRSGIPAVEVVISDGTGDAVIIFSGRRNIPGIDLGRCIMIDGVPHRDADRTVVLNPAYTLLA 117
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A8F4FRT2_9ACTN (Uncharacterized protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FRT2_9ACTN) HSP 1 Score: 120 bits (300), Expect = 8.850e-33 Identity = 53/114 (46.49%), Postives = 87/114 (76.32%), Query Frame = 1 Query: 7 LRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 L++L K+L +++++++ERLQ R A LGVT ++ RT + +GGEVQ +++ PR+G P+ E+T+ DGSG VAVFTGRR++AG+ R +++EGV R ER R++++NP+YT++ Sbjct: 2 LKNLRKKLSQSIDDIEEERLQGRSADLGVTRIADAPTRTSIIIGGEVQGLQVVPRAGSPSLEVTIGDGSGRAVAVFTGRRRLAGVDCGRRVLIEGVGREERGRILVVNPSYTIV 115
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Match: A0A6L6D7E3_9ACTN (DNA-binding protein n=5 Tax=root TaxID=1 RepID=A0A6L6D7E3_9ACTN) HSP 1 Score: 120 bits (300), Expect = 1.030e-32 Identity = 58/116 (50.00%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 1 MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQRMRIAPRSGVPAFEITVSDGSGDVVAVFTGRRQVAGISHNRALVLEGVARLERNRLVMLNPAYTLI 348 MGL+++ K V E+D ERL +RF LG+ +S + PR +V GEV+RM I PR+G+P+ EI ++DGSG+ VF+GRR VAGI H LV++GV + RLV LNPAYTL+ Sbjct: 1 MGLKNVLKSASMGVREMDAERLTDRFIALGLQPLSELEPRFKAKVCGEVKRMSIKPRAGIPSMEIVINDGSGEATVVFSGRRHVAGIEHGHCLVVDGVPHQDGKRLVFLNPAYTLL 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11570.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11570.2.1 >prot_P-wetherbeei_contig11570.2.1 ID=prot_P-wetherbeei_contig11570.2.1|Name=mRNA_P-wetherbeei_contig11570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MGLRDLAKRLKATVEELDDERLQERFAGLGVTAMSAVAPRTPVRVGGEVQback to top mRNA from alignment at P-wetherbeei_contig11570:770..1132- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11570.2.1 ID=mRNA_P-wetherbeei_contig11570.2.1|Name=mRNA_P-wetherbeei_contig11570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig11570:770..1132- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11570:770..1132- >mRNA_P-wetherbeei_contig11570.2.1 ID=mRNA_P-wetherbeei_contig11570.2.1|Name=mRNA_P-wetherbeei_contig11570.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig11570:770..1132- (Phaeothamnion wetherbeei SAG_119_79)back to top |