mRNA_P-wetherbeei_contig11560.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11560.1.1
Unique NamemRNA_P-wetherbeei_contig11560.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A371B0J0_9HYPH (Site-specific integrase n=3 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B0J0_9HYPH)

HSP 1 Score: 531 bits (1368), Expect = 1.790e-186
Identity = 263/311 (84.57%), Postives = 290/311 (93.25%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            M +A LT  FVRQA+C P RKK D+FD  QRGF+LEVRSSGGKTYYQRYTDERGRERQYKIG ADVL+L+QARRKGRQ+VAEALLGADPQQ+RREMRA+P LR FVAERYLP+VQTYK SWQTDETVLRIH+LP+LG+LALDEIKTDAIS LIN MR DGYA GTMNRVIVILRYIYNLARKWKTPGG +NPA+GLSAGP+VQRNRFL++WEAENLVRAI +DEN+TAARSI+LLLLTGARRNE+TFAKWDYVDWKN+TLLVPKSKSGRARVIALNQSAIALL +TPR++GN Y+FPSEVTGRPSASLFFP
Sbjct:    4 MSVAYLTTSFVRQALCPPGRKKADFFDVGQRGFLLEVRSSGGKTYYQRYTDERGRERQYKIGPADVLSLDQARRKGRQVVAEALLGADPQQKRREMRAIPLLREFVAERYLPYVQTYKTSWQTDETVLRIHVLPRLGHLALDEIKTDAISSLINAMRVDGYAPGTMNRVIVILRYIYNLARKWKTPGGDNNPAAGLSAGPDVQRNRFLSEWEAENLVRAIHADENRTAARSILLLLLTGARRNEITFAKWDYVDWKNKTLLVPKSKSGRARVIALNQSAIALLTATPRIEGNSYIFPSEVTGRPSASLFFP 314          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A0Q7TKY4_9HYPH (Tyr recombinase domain-containing protein n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TKY4_9HYPH)

HSP 1 Score: 531 bits (1367), Expect = 2.200e-186
Identity = 259/311 (83.28%), Postives = 292/311 (93.89%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP   L+A FVRQ  C P RKKTDYFD  QRGFMLEVRSSGGKT+YQRYTDERGRERQYKIG ADV++L+QARRK +QIVAEALLGADPQQ+RREMRA+P LR F+AERYLPF++TYK+SW+TDETVLRIH+LP+LG+LALDEIKTDAIS+LIN MRADGYA+GTMNRVIVILRYIYNLARKWKTPGG +NPA+GL+AGP+VQRNRFL++WEAENLVRAI +DEN+TAARSI+LLLLTG RRNE+TFAKWDY+DWKNRTLLVPKSKSGRARVIALNQSAIALL +TPR+DGNPY+FPSEVTG+PSASLFFP
Sbjct:    1 MPTVALSASFVRQVQCAPDRKKTDYFDVGQRGFMLEVRSSGGKTFYQRYTDERGRERQYKIGPADVVSLDQARRKAKQIVAEALLGADPQQKRREMRAIPLLRDFIAERYLPFIKTYKSSWRTDETVLRIHVLPRLGHLALDEIKTDAISNLINTMRADGYASGTMNRVIVILRYIYNLARKWKTPGGENNPAAGLTAGPDVQRNRFLSEWEAENLVRAIHADENRTAARSILLLLLTGGRRNEITFAKWDYIDWKNRTLLVPKSKSGRARVIALNQSAIALLTATPRIDGNPYIFPSEVTGKPSASLFFP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A345ZTN7_9HYPH (Site-specific integrase n=2 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZTN7_9HYPH)

HSP 1 Score: 516 bits (1328), Expect = 3.190e-180
Identity = 258/311 (82.96%), Postives = 285/311 (91.64%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP  VL+  FVRQAVC   R+KTDYFDSTQRGF+LEVR SGGKTYYQRYTDERGRERQYKIG ADV++L+QARRK +QIVAEALLGADPQQ+RRE+RAVP LR FVAERYLP+VQTYKNSW TDETVLRIHILPKLG LALDEIKTDAI+DLIN MR DGYAAGTMNRVIVILRYIYNLARKWK PGG +NPA+GL+AGP+VQRNRFL++ EAE L+RAI +DEN+TAAR IMLLLLTGARRNEVTFAKWDY+DWKN+TLLVPKSKSGRARV+ALNQSAIALL STPR++GNPY+FPS V G+PS SLFFP
Sbjct:    1 MPTVVLSVPFVRQAVCPTGRRKTDYFDSTQRGFLLEVRCSGGKTYYQRYTDERGRERQYKIGPADVVSLDQARRKAKQIVAEALLGADPQQKRRELRAVPLLRDFVAERYLPYVQTYKNSWSTDETVLRIHILPKLGALALDEIKTDAITDLINRMREDGYAAGTMNRVIVILRYIYNLARKWKVPGGLENPAAGLTAGPDVQRNRFLSEEEAEALMRAIHADENRTAARCIMLLLLTGARRNEVTFAKWDYIDWKNKTLLVPKSKSGRARVVALNQSAIALLTSTPRMEGNPYIFPSPVNGKPSPSLFFP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A1Q4DDL1_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DDL1_9HYPH)

HSP 1 Score: 461 bits (1185), Expect = 1.310e-158
Identity = 228/311 (73.31%), Postives = 264/311 (84.89%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP  VLTA FVR A C    KK D+FD  QRGF+LEVR SGGKTYYQRY+D RGR RQ+KIG ADVL L+QARRK R I+A+A+LG DPQ+QR+E RA+P+L  F  +RYLP+VQTYKNSWQTDETVLR+HILP+LG+LALDE+ TDAISD+I  MR +GYA GTMNRVIVILRY++NLARKWK PG ADNPA+ LSAGP+VQRNRFL++ E E LV AI+ DENQTAAR+I+LLLLTGARRNE+TFA+WDYVDW NRTLLVP+SKSGRARVIALNQ+AI LL + PR+ GNPY+ PS V GRPS SLFFP
Sbjct:    1 MPTVVLTASFVRSASCPADAKKLDFFDGAQRGFLLEVRCSGGKTYYQRYSDARGRARQFKIGPADVLTLDQARRKARHILAQAVLGTDPQKQRQEARAIPRLAQFAQDRYLPYVQTYKNSWQTDETVLRVHILPRLGSLALDEVTTDAISDVIARMRENGYATGTMNRVIVILRYMFNLARKWKVPGVADNPAAALSAGPDVQRNRFLSEIEVECLVDAIRKDENQTAARAILLLLLTGARRNEITFARWDYVDWDNRTLLVPRSKSGRARVIALNQAAITLLQAAPRLPGNPYILPSPVNGRPSPSLFFP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A1W6ZW71_9HYPH (Uncharacterized protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZW71_9HYPH)

HSP 1 Score: 403 bits (1036), Expect = 4.100e-136
Identity = 200/311 (64.31%), Postives = 245/311 (78.78%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP AVLT  FV  A C P + K DYFDS QRGFMLEVR SGGKT+YQRYTDERGRERQYKIG AD + L+QAR+K R I+A+ALLG DPQ +RRE+RA+P L   V +RYLP V+ YK SW+TDETV R+HILP LG   LDEI  DAI+DL+  MR  GYA+GT+NRV++++R+I+NLARKWK  G  +NP  GL+  P+VQR+RFL+  E + L+ +I  DEN++AA++IM+LLLTGARRNEV+ AKWDY+DW+ RTLLVP SK+GR RVIALN  A+ALL S PR+D NPY+FPS +TGRP  SL FP
Sbjct:    1 MPKAVLTRPFVDCATCGPGKAKVDYFDSEQRGFMLEVRRSGGKTFYQRYTDERGRERQYKIGPADAITLDQARKKARIILAQALLGDDPQARRRELRAIPTLAELVRDRYLPHVKAYKRSWRTDETVFRVHILPVLGTKPLDEITGDAIADLMQRMRDRGYASGTINRVLILIRFIFNLARKWKIAGVKENPTFGLNTAPDVQRDRFLSPEETQRLIESINIDENRSAAQTIMMLLLTGARRNEVSHAKWDYIDWERRTLLVPISKTGRPRVIALNGRAMALLRSIPRLDDNPYIFPSPITGRPCPSLHFP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A127EXR3_9HYPH (Phage integrase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EXR3_9HYPH)

HSP 1 Score: 394 bits (1012), Expect = 1.830e-132
Identity = 194/311 (62.38%), Postives = 244/311 (78.46%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP A+L+A FV+ AVC    KK D+FDS QRGFMLEVR SGGKTYYQRYTDERGRERQ+KIG ADVL+L  ARRK R   AEAL+G+DPQ++R EMR +P L   V +RYLP V++YK SW TDETVLRIHILP LG   +D ++ + I+ L+  MR  GYA GT NRV+++LR+I+NLARKW+ PG  +NP +G++  P+V+R RFL+  EA++L+ +I+ DENQ AA++IMLLLLTGARRNE+T A+WDY+DW+ RTLLVP +KSG+ R IALN +AI LL S PR+D NPY+ PS +TG PS SLFFP
Sbjct:    1 MPRALLSAAFVKSAVCPDGLKKVDFFDSEQRGFMLEVRRSGGKTYYQRYTDERGRERQFKIGPADVLSLTMARRKARTAAAEALVGSDPQERRAEMRTIPTLAELVRDRYLPHVKSYKRSWCTDETVLRIHILPALGFQYVDLVRAEPIAALVERMREKGYATGTTNRVVIVLRHIFNLARKWRVPGVGENPTAGINLAPDVKRERFLSLEEAQHLIASIEQDENQVAAKAIMLLLLTGARRNEITHARWDYLDWEKRTLLVPLAKSGKPRSIALNAAAIELLRSIPRLDLNPYILPSPLTGEPSPSLFFP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A6N6MGI5_9HYPH (Tyrosine-type recombinase/integrase n=2 Tax=Methylobacterium sp. YIM 132548 TaxID=2615211 RepID=A0A6N6MGI5_9HYPH)

HSP 1 Score: 357 bits (916), Expect = 1.020e-115
Identity = 173/309 (55.99%), Postives = 228/309 (73.79%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLF 927
            +P  VLT  F+R A C   RKKTDYFD    GF+LEVR+SG KT++QRY+DERGRERQ+KIG ADVL+LEQA+RK + I AEA LG+DPQ++R+ +R VP L   + +RY+P +Q Y+ SW++DE  LR+H LPKLG+L LDE+  + + D++ GM+ DGY+  T NRVI++LR+ YNLAR+WK PG ++NP +G+    E  R RFL + E + LV A+  D N+ AA +I+LLLLTGARRNE+  A+W YVDW+ RTLLVP SKSG+ R I LN  A+ALL S   V GNP++FP + TGRPS +LF
Sbjct:    8 VPKVVLTVPFIRSATCPLDRKKTDYFDRNFTGFLLEVRASGRKTFHQRYSDERGRERQFKIGPADVLSLEQAKRKAQAIRAEAFLGSDPQRKRQAIRVVPTLAQLIRDRYIPHIQGYRRSWRSDEITLRLHALPKLGSLYLDEVTAEHVVDVVRGMKLDGYSPSTTNRVIIVLRFAYNLARRWKLPGASENPVTGIKLAEEHHRERFLTEVETKRLVDALSVDTNRVAANAILLLLLTGARRNEIGQAQWSYVDWRRRTLLVPLSKSGKPRRITLNAGAVALLQSVMPVPGNPFIFPCQRTGRPSPTLF 316          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: UPI000D38DEA9 (site-specific integrase n=1 Tax=Devosia naphthalenivorans TaxID=2082392 RepID=UPI000D38DEA9)

HSP 1 Score: 348 bits (892), Expect = 2.980e-114
Identity = 175/312 (56.09%), Postives = 223/312 (71.47%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPG-GADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP   LTA  +R A C     K +YFD+   G +LEVR++G KT+YQRYTD  G +RQYKIG ADV+ LEQARRKGR I AEA LG DPQ QR+E+RA   L   V  RYLP+VQ YK SW+TDE +LR+HILP LG L LDE+  + IS ++  MR  GYAAGT NR +++LRYI+NLARKWK  G  A+NP + L   P+V R+RFL+  E   L+ +I +DEN+ AA +++LLLLTG RRNE+T A+W ++DW+ +TLLVP+SKSG+ R I L+  A+ALL    R  GNPY+FP+E TGRPS SL+ P
Sbjct:    1 MPKVNLTATRIRSAACPEGCAKAEYFDTVLTGLVLEVRATGRKTFYQRYTDRHGAQRQYKIGTADVITLEQARRKGRAIKAEAFLGPDPQLQRQELRASLTLSELVQSRYLPYVQEYKRSWKTDEIMLRLHILPALGRLYLDEVTAEQISAMLRTMRVKGYAAGTTNRAVILLRYIFNLARKWKIAGVTAENPTAPLQLAPDVHRDRFLSPEETRRLLESIAADENRVAADAVLLLLLTGGRRNEITQAEWKHIDWRKKTLLVPRSKSGKPRKITLSGQAVALLKGIKRTKGNPYIFPTEATGRPSPSLYGP 312          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: A0A7W9Z1Q4_9HYPH (Integrase n=3 Tax=Rhizobium/Agrobacterium group TaxID=227290 RepID=A0A7W9Z1Q4_9HYPH)

HSP 1 Score: 337 bits (864), Expect = 4.300e-110
Identity = 167/311 (53.70%), Postives = 222/311 (71.38%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFP 933
            MP+  LT   VR A C   ++K +Y D+ QRGF LEV  +G KTY QRYTD+ G++  YKIGAA+VL L+QAR+K R I+A+  LG DPQ +R+E R +P L  FV  RYLP  Q  K SW+TDET+LR+HILP LG+  +D I  + I+ L+  M+  GYA GT+NR +++LR+++NLAR+WK  G  +NP + L+  P   R RFL+  E  +L+ +IQ DENQ AA++I+LLLLTGARRNEVT AKW+Y++W++ TL VP SKSG+ R ++LN+ AIALL S  R  GNPY+FPS VTG PS SL +P
Sbjct:    1 MPVINLTQNIVRTATCPAGKRKIEYSDAKQRGFYLEVLHTGTKTYRQRYTDDHGKKNHYKIGAANVLTLDQARQKARSILAQVHLGEDPQAKRQEKREIPSLSEFVRSRYLPHAQEKKRSWKTDETMLRVHILPALGSKPMDTITPEQIAALVQRMKGKGYAPGTVNRAVILLRFMFNLARRWKIAGIIENPTADLALAPTQHRQRFLSKDELRSLLLSIQEDENQVAAQAILLLLLTGARRNEVTHAKWEYINWQSNTLWVPLSKSGKERFVSLNKQAIALLRSLQRTPGNPYIFPSTVTGEPSPSLHYP 311          
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Match: UPI00199DF9A9 (site-specific integrase n=1 Tax=Vogesella fluminis TaxID=1069161 RepID=UPI00199DF9A9)

HSP 1 Score: 254 bits (649), Expect = 1.240e-77
Identity = 135/322 (41.93%), Postives = 195/322 (60.56%), Query Frame = 1
Query:    1 MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYTDERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVPQLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAISDLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGPEV-QRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKWDYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEVTGRPSASLFFPGRESAKGRAL 963
            MP   L A  VR A C   +KK D +D+   GF+LEVR SGGKT+Y RY D RG++ Q++IG A  +  EQAR   +   A  +LG +P +++R +RA+P L  F A+RYL + +  K SW TDE+ LR H+LP+     LDE++   I DL +GMRA GYA  T NR++++ RY++NL +KWK PG   NPASG+    E  +R RFL   E + LV  +++ +N      + LLLL G R+ E+  ++W + D + RT  +P SK+G+AR + L+   +A+L   PR DG PYV P+  T +P  S+F+    + K   L
Sbjct:   16 MPTVTLDANTVRTATCPADKKKLDLYDTAIPGFVLEVRPSGGKTWYLRYRDARGKQHQHRIGDAAGITFEQARTAAQTTRARVILGENPAEEKRALRAIPTLEDF-AQRYLDYAKGAKRSWDTDESFLRNHVLPRWAKRHLDEVRQQDIIDLQHGMRASGYAPATANRIVILTRYMWNLGKKWKVPGTETNPASGVELFEENNKRERFLTAEEVQRLVACVRNSDNPQLQYIVPLLLLLGCRKRELLDSQWSHFDLERRTWRIPLSKNGKARHVPLSADVLAILAQVPRWDGCPYVVPNPKTRKPYVSIFYSWDTARKQAGL 336          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11560.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A371B0J0_9HYPH1.790e-18684.57Site-specific integrase n=3 Tax=unclassified Pseud... [more]
A0A0Q7TKY4_9HYPH2.200e-18683.28Tyr recombinase domain-containing protein n=1 Tax=... [more]
A0A345ZTN7_9HYPH3.190e-18082.96Site-specific integrase n=2 Tax=Pseudolabrys taiwa... [more]
A0A1Q4DDL1_9HYPH1.310e-15873.31Uncharacterized protein n=1 Tax=Rhizobiales bacter... [more]
A0A1W6ZW71_9HYPH4.100e-13664.31Uncharacterized protein n=1 Tax=Pseudorhodoplanes ... [more]
A0A127EXR3_9HYPH1.830e-13262.38Phage integrase n=1 Tax=Rhodoplanes sp. Z2-YC6860 ... [more]
A0A6N6MGI5_9HYPH1.020e-11555.99Tyrosine-type recombinase/integrase n=2 Tax=Methyl... [more]
UPI000D38DEA92.980e-11456.09site-specific integrase n=1 Tax=Devosia naphthalen... [more]
A0A7W9Z1Q4_9HYPH4.300e-11053.70Integrase n=3 Tax=Rhizobium/Agrobacterium group Ta... [more]
UPI00199DF9A91.240e-7741.93site-specific integrase n=1 Tax=Vogesella fluminis... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11560contigP-wetherbeei_contig11560:417..1600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog555779.Dthio_PD0042
PFAMsArm-DNA-bind_3,Phage_integrase
Model size1184
Max annot lvl28221|Deltaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2.97e-72
EggNOG OGsCOG0582@1|root,COG0582@2|Bacteria,1N2H9@1224|Proteobacteria,42T63@68525|delta/epsilon subdivisions,2X5G3@28221|Deltaproteobacteria,2MGQE@213115|Desulfovibrionales
DescriptionPhage integrase family
Cds size1110
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185916.6549082-CDS-P-wetherbeei_contig11560:416..15261683185916.6549082-CDS-P-wetherbeei_contig11560:416..1526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11560 417..1526 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185916.6640441-UTR-P-wetherbeei_contig11560:1526..16001683185916.6640441-UTR-P-wetherbeei_contig11560:1526..1600Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11560 1527..1600 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11560.1.1prot_P-wetherbeei_contig11560.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11560 417..1526 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11560.1.1

>prot_P-wetherbeei_contig11560.1.1 ID=prot_P-wetherbeei_contig11560.1.1|Name=mRNA_P-wetherbeei_contig11560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=370bp
MPLAVLTAQFVRQAVCVPTRKKTDYFDSTQRGFMLEVRSSGGKTYYQRYT
DERGRERQYKIGAADVLALEQARRKGRQIVAEALLGADPQQQRREMRAVP
QLRAFVAERYLPFVQTYKNSWQTDETVLRIHILPKLGNLALDEIKTDAIS
DLINGMRADGYAAGTMNRVIVILRYIYNLARKWKTPGGADNPASGLSAGP
EVQRNRFLADWEAENLVRAIQSDENQTAARSIMLLLLTGARRNEVTFAKW
DYVDWKNRTLLVPKSKSGRARVIALNQSAIALLNSTPRVDGNPYVFPSEV
TGRPSASLFFPGRESAKGRALTMSACMICGIPLPVFSSIAAYRFTWCRVC
SAICTPARRSATRISPRKR*
back to top

mRNA from alignment at P-wetherbeei_contig11560:417..1600+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11560.1.1 ID=mRNA_P-wetherbeei_contig11560.1.1|Name=mRNA_P-wetherbeei_contig11560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1184bp|location=Sequence derived from alignment at P-wetherbeei_contig11560:417..1600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCTTGCTGTCCTCACCGCGCAATTTGTTCGTCAGGCCGTCTGCGT GCCGACGCGGAAGAAGACTGACTATTTCGATTCAACCCAGCGCGGCTTCA TGCTCGAGGTGCGAAGTTCGGGCGGCAAGACCTACTATCAGCGCTACACC GACGAGCGCGGCCGCGAGCGGCAATACAAGATCGGCGCGGCCGACGTGCT GGCGCTCGAGCAGGCGCGTCGCAAGGGCAGGCAGATCGTCGCCGAGGCGC TGCTGGGCGCCGACCCGCAGCAGCAGCGGCGCGAAATGCGCGCGGTGCCG CAACTCAGGGCCTTCGTGGCCGAGCGCTATCTGCCCTTCGTTCAGACCTA CAAGAACAGCTGGCAAACCGACGAGACCGTCTTGCGCATTCACATCCTGC CGAAGCTCGGCAATCTGGCGCTCGACGAGATCAAGACCGATGCGATCTCC GACCTGATCAACGGCATGCGCGCCGACGGTTATGCCGCCGGCACCATGAA CCGCGTCATCGTCATCCTGCGCTACATCTACAATCTGGCGCGCAAGTGGA AGACGCCGGGCGGGGCCGACAATCCGGCCAGCGGACTGAGCGCGGGCCCG GAAGTTCAGCGCAATCGCTTCCTTGCCGACTGGGAGGCGGAAAACCTGGT GCGCGCGATTCAGAGCGACGAGAACCAGACCGCCGCGCGCTCGATCATGC TCTTGCTACTCACGGGCGCCCGCCGCAACGAGGTCACCTTCGCCAAATGG GACTATGTCGACTGGAAGAACAGGACGCTGCTGGTGCCGAAGTCGAAATC GGGCAGGGCGCGGGTCATTGCGCTGAACCAGTCGGCGATCGCGCTGTTGA ATTCAACGCCGCGGGTTGACGGCAATCCGTACGTATTTCCGTCGGAGGTT ACCGGGCGTCCATCGGCATCGTTGTTTTTTCCTGGGCGCGAATCCGCGAA AGGGCGGGCCTTGACGATGTCCGCCTGCATGATCTGCGGCATTCCTTTGC CAGTTTTCTCGTCAATCGCGGCGTATCGCTTTACGTGGTGCAGGGTCTGC TCGGCCATTTGCACGCCCGCACGACGCAGCGCTACGCGCATCTCACCCAG GAAACGTTGAGTGACGCCGCCGATCTGATCCAGCATGCGGTGGTTTTTCC AACCCCGATCGCCGGCGGCTTGAACAAGAGCGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11560:417..1600+

>mRNA_P-wetherbeei_contig11560.1.1 ID=mRNA_P-wetherbeei_contig11560.1.1|Name=mRNA_P-wetherbeei_contig11560.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig11560:417..1600+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCTTGCTGTCCTCACCGCGCAATTTGTTCGTCAGGCCGTCTGCGT
GCCGACGCGGAAGAAGACTGACTATTTCGATTCAACCCAGCGCGGCTTCA
TGCTCGAGGTGCGAAGTTCGGGCGGCAAGACCTACTATCAGCGCTACACC
GACGAGCGCGGCCGCGAGCGGCAATACAAGATCGGCGCGGCCGACGTGCT
GGCGCTCGAGCAGGCGCGTCGCAAGGGCAGGCAGATCGTCGCCGAGGCGC
TGCTGGGCGCCGACCCGCAGCAGCAGCGGCGCGAAATGCGCGCGGTGCCG
CAACTCAGGGCCTTCGTGGCCGAGCGCTATCTGCCCTTCGTTCAGACCTA
CAAGAACAGCTGGCAAACCGACGAGACCGTCTTGCGCATTCACATCCTGC
CGAAGCTCGGCAATCTGGCGCTCGACGAGATCAAGACCGATGCGATCTCC
GACCTGATCAACGGCATGCGCGCCGACGGTTATGCCGCCGGCACCATGAA
CCGCGTCATCGTCATCCTGCGCTACATCTACAATCTGGCGCGCAAGTGGA
AGACGCCGGGCGGGGCCGACAATCCGGCCAGCGGACTGAGCGCGGGCCCG
GAAGTTCAGCGCAATCGCTTCCTTGCCGACTGGGAGGCGGAAAACCTGGT
GCGCGCGATTCAGAGCGACGAGAACCAGACCGCCGCGCGCTCGATCATGC
TCTTGCTACTCACGGGCGCCCGCCGCAACGAGGTCACCTTCGCCAAATGG
GACTATGTCGACTGGAAGAACAGGACGCTGCTGGTGCCGAAGTCGAAATC
GGGCAGGGCGCGGGTCATTGCGCTGAACCAGTCGGCGATCGCGCTGTTGA
ATTCAACGCCGCGGGTTGACGGCAATCCGTACGTATTTCCGTCGGAGGTT
ACCGGGCGTCCATCGGCATCGTTGTTTTTTCCTGGGCGCGAATCCGCGAA
AGGGCGGGCCTTGACGATGTCCGCCTGCATGATCTGCGGCATTCCTTTGC
CAGTTTTCTCGTCAATCGCGGCGTATCGCTTTACGTGGTGCAGGGTCTGC
TCGGCCATTTGCACGCCCGCACGACGCAGCGCTACGCGCATCTCACCCAG
GAAACGTTGA
back to top