mRNA_P-wetherbeei_contig11556.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11556.1.1
Unique NamemRNA_P-wetherbeei_contig11556.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A7K0U1H6_9ACTN (Uncharacterized protein (Fragment) n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0U1H6_9ACTN)

HSP 1 Score: 224 bits (572), Expect = 7.860e-61
Identity = 164/441 (37.19%), Postives = 224/441 (50.79%), Query Frame = 1
Query:   43 VAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGN---VTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYT-AINDGFG-RVGNPTVAGKPNLRWRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAVPRTLPPP--YPNGNGWTPYGSAVMGNAGTASNVNLTPLFDYWFRNSIAGG------LLLFKGDETAALYTVKKYSTTLSVTYNVPP 1326
            VAAG  V P  G          P AV+   FDA TS E    R    T++ N+DGS T+V S   V+Y   +G+W+ IDS LV    G   N ANSWSV F  ++ DGV  T  R D   +   +   + P +  DGVSV+Y +V PGVDIVY V G  VEE I ++ PDA VSS  F++          ASG  +  G   + V+  ET D  G  VD E +   V      G + VS+D  W++   +DRFP+ IDP+    A T +     PGQ    A +D    RVGNP +   P  +WR    ++ +S +   V+ A +  TV  G + GNR   VYWA+E G+H     R++P P  +P G   T + +  + + GT   V++T L  +W  +SIAG          FKG E   +YT K+ + +LSVTYN PP
Sbjct:   63 VAAGVRVEPTPGAG-------APPAVSGGRFDAATSVEVVGERGERHTVFRNSDGSKTLVTSLVPVNYQ-VDGRWERIDSRLVADATG-FHNAANSWSVHFGSLASDGVRLTVGR-DSTGFTLSDAADSLPTVGADGVSVQYSNVLPGVDIVYRVSGDSVEEFISLSGPDA-VSSFRFKLLAGSGVFGDAASGFRVRKGGLSVRVSGLETTDRRGAFVDDEASSRLVPDSEGGGVLTVSVDSRWLRGLAADRFPVVIDPSFAPQAGTALEWLQYPGQATVPATSDSSHIRVGNPNITSNPTKKWRSVASFDLSSVVSRNVSKAELAITVTDGPS-GNRAVHVYWANEVGWHNGVPSRSVPAPGEWPWGLASTEFATGTLSSIGTTETVDVTSLVKFWAESSIAGAPSSADRSFFFKGYEPDGVYTYKRATLSLSVTYNSPP 491          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI001CA63A74 (LamG domain-containing protein n=1 Tax=Streptomyces sp. PLK6-54 TaxID=2873382 RepID=UPI001CA63A74)

HSP 1 Score: 103 bits (257), Expect = 1.030e-19
Identity = 82/261 (31.42%), Postives = 117/261 (44.83%), Query Frame = 1
Query:  130 GFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVD---GVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIG----------DARVEQRSDASGLVISVGESKLYVAAPE--------TYDATGFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLT-GLATTVVTS 846
            G+ A+TS  D        T+Y NADGSHT   S DAV+Y D+ G WQPID+ L  G DG++  RANS  V F+  + D   GV  TT  G  + +           +  DG +V Y  V PG D+V      GV+E + +    A  ++  F +           D  +E R  A  +   +  +  Y +  +        TY     LVD  G          + V++D  W+   P+  FP+T+DPT+T G  TT   S
Sbjct:  103 GWSAKTSKRDAAHSGRTVTVYDNADGSHTRQVSLDAVNYQDAHGDWQPIDTRLSRGADGSLHERANSLGVVFAQRAADPRLGV-LTTGSGQSVGYALGGAAPVAGTLAADGAAVTYPGVLPGTDLVAAASPTGVKEAVVLHSAQAG-NTWTFPLSLKGLTPSLARDGSIELRDAAGRIAARIPRAYAYDSRVDRRSGDPTTTYAVHYALVDDHGTTA-------LKVTLDPSWL-HDPARVFPVTVDPTITDGWTTTYAES 353          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A8J3VF43_9ACTN (Uncharacterized protein n=2 Tax=Rhizocola hellebori TaxID=1392758 RepID=A0A8J3VF43_9ACTN)

HSP 1 Score: 92.0 bits (227), Expect = 5.450e-16
Identity = 88/296 (29.73%), Postives = 123/296 (41.55%), Query Frame = 1
Query:   28 ETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTSTE-------------DPTG-----RSAFETLYINADGSHTVVASSDAVHYSDSEGQ-WQPIDSTLVVGD--DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIE----GHTAKPRIERDGVS-VRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQIA-----HDGT--VGVSIDRDWVKRQPSDRFPITIDPTL 816
            + A PVA   + RP  G SP   P  LP    P G  A   T              DP       R A   +Y N DG+ TV+  ++ V++    G  W+ ID+TLV     DG IRN ANSW V F  I   G       G    W A E         P I+ D  + + Y DVWPGVD+VY+V    V+E I +     D S   F +    +E+R      V +       +   E   + G + D  G   ++       DG   + +S+D+ W+  Q   + P+ IDP+ 
Sbjct:   32 QAAKPVA---VARPLLGTSP---PVRLPEPSMPTGNAATEQTSQAAKPKRPVPREFDPAREIIRRRDAQTEVYANDDGTETVILHTEPVNFQPRPGAAWEKIDNTLVPDPQRDGWIRNLANSWKVEFGPIMSQGGGVELSAGTGKIWFAPELGDVHQMVLPVIDEDHPNRLVYSDVWPGVDVVYSVTSAQVKESIVVRS--GDRSDFPFAVSGLGLEERMLLPPRVTAASAGTWQLGPLEVTGSQGTVTDGSGVKARVETLDGRKDGRQRMTLSVDKAWLATQSGGKHPVVIDPSF 319          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI0017F2886C (Uncharacterized protein n=1 Tax=Saccharothrix sp. TaxID=1873460 RepID=UPI0017F2886C)

HSP 1 Score: 90.9 bits (224), Expect = 1.300e-15
Identity = 84/265 (31.70%), Postives = 111/265 (41.89%), Query Frame = 1
Query:   67 PDAGESPTATPEELPRAVAPAGFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDG------------TIRNRANSWSVAFSDISVDGVSFTTDRGDV-LRWKAIEGHTAKPRIERDGVS--VRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEI-GDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQIAHDGTVGVSIDRD-WVKRQPSDRFPITIDP 810
            P  G  P   P E+       G D+R  T   + R+A  T   N DG+ T         + D +G WQPI+ +LV  DD               R RAN WS  F+     G      +GD  + +  +     +P I     S  VRY DVWPGVD+ Y V    V+E I + RP A   S+AF++ G   V    DA G  +  G S     AP      GF    E  V +   DG   V   RD +++  P   FP+ IDP
Sbjct:   50 PQHGIDPVGAPREV------GGHDSREIT---SLRTASSTTRRNTDGTVTTRNFGSPQFFQDGQGVWQPINLSLVRDDDPHDAGVKAPESAVAFRTRANDWSARFAPTDFAGGMVRVGQGDTRIGFAPVGARAVEPSIVSTNGSQTVRYSDVWPGVDVEYAVTSYSVKENIVLKRPGAQ-DSVAFKVLGSTPVAD--DADGFALGGGFS----IAPPNIVLNGFGPVTEDGVVRQRLDGDRLVVAVRDGYLRSLPESAFPVVIDP 298          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A4R0HY56_9ACTN (DNRLRE domain-containing protein n=1 Tax=Kribbella sindirgiensis TaxID=1124744 RepID=A0A4R0HY56_9ACTN)

HSP 1 Score: 84.3 bits (207), Expect = 1.700e-13
Identity = 92/325 (28.31%), Postives = 140/325 (43.08%), Query Frame = 1
Query:    7 AQALSRPETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTST--EDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGD-DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSS-LAFEIGDARVEQRSDASGLVISVG--------ESKLYVAAPETYDAT--------GFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQ--GYTAINDGFGRVGNPTV 915
            A AL+ P+    VAA  + R  AG      P  +  A   A  D   +   E    R+A  T Y  +DG+  V  S++ VHY D++G+WQ ID+ +  G  + +  N  N++   F   S   ++F  D   +    A E     P ++    SV + DV+   D+ Y V   GV+E + +T  DADV+   AFE+  + +  ++   G   S+G          K  + AP  YD++        G+       VTQ      + +  D+ W+  +    FPI IDPT+      VV   PT  Q    +  N G     NPTV
Sbjct:   24 ATALAHPQEVAQVAAPQVARAAAGPLAAPLPARVKNASTVATVDGTPARVRELEERRTASSTSYRMSDGTTQVELSTEPVHYKDTKGKWQDIDTKVTAGSGEDSFENAKNAFRTRFGKSSDRLLTFEADGESIGLGAAGEKRALTPVVKDS--SVAFPDVFGTADVRYYVSRTGVKETVVLTA-DADVAGEYAFELHTSGLTAKAQPDG---SIGFFKKNGDERPKYVIPAPNMYDSSATNQLGQPGYSDKITQTVTQQGGKTLLTLKPDQAWLAAKERV-FPIVIDPTI------VVVPDPTAAQDTSISEANAGVNYGTNPTV 335          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A7X5ZZV8_9ACTN (RHS repeat-associated protein n=2 Tax=Kribbella shirazensis TaxID=1105143 RepID=A0A7X5ZZV8_9ACTN)

HSP 1 Score: 82.8 bits (203), Expect = 5.310e-13
Identity = 87/331 (26.28%), Postives = 143/331 (43.20%), Query Frame = 1
Query:  169 RSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGD-DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVG--------ESKLYVAAPETYDAT--------GFLVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVG---NPTVAGKPNLR---WRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAV 1092
            R+A  T Y  +DG+  V  S++ VHY DS+G+WQP+D+ +  G  + +  N  N++   F   S   ++F  D GD +   A     A   + +D  SV + DV+   D+ Y V   GV+E + +T P        FE+  + +  ++   G   S+G          K  + AP  YD++        G+       ++Q      + +  DR W+  +    +PI IDPT+      VV   P   Q  T+I++     G   NP+V    +L    WRG + ++ +           + ST    SA  N +Y   +  +Y    SAV
Sbjct:  133 RTASSTSYRMSDGTTQVELSTEPVHYKDSKGKWQPVDTKVTAGSGEDSFENAKNNFRTRFGKSSDRLLTFEAD-GDSIGLGAAGEKRALTALTKDS-SVAFPDVFGTADVRYYVSRTGVKETVVLTAPADAADEYTFELRTSGLTAKAQPDG---SIGFFKKNDDERPKYVIPAPNMYDSSTQNRLGQPGYSEKITQTISQQGGKTLLTLKPDRSWLAAKERV-YPIFIDPTI------VVVPDPAAAQD-TSISEANANTGYGTNPSVLVGDDLSHNTWRGLLKFDLSM----------IPSTTTIRSADLNVHYGAGFGGDYKLPLSAV 440          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A1H9V424_9PSEU (Intein C-terminal splicing region/RHS repeat-associated core domain-containing protein n=2 Tax=Lentzea flaviverrucosa TaxID=200379 RepID=A0A1H9V424_9PSEU)

HSP 1 Score: 82.8 bits (203), Expect = 5.370e-13
Identity = 87/317 (27.44%), Postives = 136/317 (42.90%), Query Frame = 1
Query:   64 RPDAGESPTATPEELPRAVAPAGFD---ARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGH----------TAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQ------IAHDG--TVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVGN----------PTVAG 921
            +P+   +P   P       AP+GF    A  S ED   R A    Y N DG+ T   S  A++Y  S+G W+PID+ +V   DG  RN A+S    F+         T      +R +  +GH           AK R+E  G  + Y  V    D+   V   GV+E + ++  DA  + L F +    ++ +     +V+S G   +    P      G + DA G+ +       ++H+G   + ++ D  WV R  + +FPI +DPT+TG    V  S  T G+   A+     + G+          PT+AG
Sbjct:   93 QPNFPAAPAPPPNAAHEVSAPSGFTGFKAGDSKEDAAKRDANSRTYRNPDGTQTTEYSQSALNYQRSDGSWEPIDTRIVPDGDG-YRNAADSVETRFNA--------TASESPFVRMRLPDGHEMSFGFAGTGAAKARVE--GSRITYPGVAAQTDLRLDVGPGGVKETLVLSSKDAATTWL-FPLQLKGLQAKISNGAVVLSDGSGAVKATIP-----AGDMTDAAGSASTAISYELVSHNGGQALKMTADAAWV-RDGARKFPIAVDPTVTGPRADVAIS--TNGRASEALTGSTLKSGDGYTTYLKFSLPTIAG 389          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: UPI0018CE8517 (PA14 domain-containing protein n=1 Tax=Mesorhizobium sp. F7 TaxID=1574409 RepID=UPI0018CE8517)

HSP 1 Score: 82.4 bits (202), Expect = 6.650e-13
Identity = 109/417 (26.14%), Postives = 174/417 (41.73%), Query Frame = 1
Query:  172 SAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVA-------FSDISVDG--VSFTTDRGDV--LRWKAIEGHTAKPRIE-----RDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDA-DVSSLAFEIGDARVEQRSDASGLVISV---GESKLYVAAPETYDATGF-------LVDAEGNVTQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRVGNPTVAGKPNLRWRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYDVYWADEYGYHASAVPRTLPPPYPNGNGWTPYGSAVMGNAGTASNVNLTPLFDYWFRNSIAGGL----LLFKGDETAALYTVKKYSTTLSVTYNVPPS 1329
            S F T Y   +G    V S + +   D+ G+   +D +     DGT       WSVA       F+D + DG  V F+    DV      A +     P +      RD   VRY DV+P VD+ YTV G  ++E +E++ P A   +S  + I    +       G ++ +   GE +  + +P  +D+ G        L   +  + ++     + ++ D +W+   P+ ++P+ +DPT+    T   TS+ +         DG   VGN   +G  +  WRG   + ++S    +V +AT+  T A+   TG RN  V+ A   GY      R               GS    N  T +    +  FD W  +   GG     ++  G+E A  YT K+ +T L V Y   PS
Sbjct:  108 SEFSTTYDQGNGVLAEVISQEQIRVEDASGEL--VDVSTSASFDGT------GWSVAPHPLSPRFADSAGDGPVVEFSAAGYDVDFTLINAADASIESPWLPWFQGPRD--VVRYPDVFPNVDLTYTVTGSTIKEYLELSAPPAAGENSWTWLIKANALSLEKTEQGDIVFLNRYGEVEFVIPSPVMWDSGGIDEQREPALTAVDTTLQEVPDGWQLTLTADPEWLS-SPARQYPVIVDPTVVDW-TINPTSYASYRDDGPTRTDGA-LVGNSRSSG--DSYWRGVASFTHSSPTTKQVIDATLRLTYANEGTTGTRNVRVFNATCSGYSCLGTFR---------------GSV---NIATGTVNFSSSSFDGWIASRFRGGSTTSSVILLGEEVAGAYTFKRLATQLVVQYKEFPS 491          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A1Q5AG32_9ACTN (TGFb_propeptide domain-containing protein n=2 Tax=Micromonospora sp. CB01531 TaxID=1718947 RepID=A0A1Q5AG32_9ACTN)

HSP 1 Score: 82.4 bits (202), Expect = 7.030e-13
Identity = 70/236 (29.66%), Postives = 109/236 (46.19%), Query Frame = 1
Query:  154 EDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTL-VVGDDGTIR-NRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARV--EQRSDASGLVI--SVGESKLYVAAPETYDATGFLVDAEGNV---------TQIAHDGTVGVSIDRDWVKRQPSDRFPITIDPTL 816
            E P  R+A    Y  +DG      S+  VHY D++G+WQ ID+T+    + G ++ NR N++S  F D S D V F  +   +    A    +  P++   G +V Y  +  G D+VY V    ++E I + +P     S  F +  A +  +QR+D S   +  S GE    + AP  YD+        G V          Q+    +V VS D  W+   P+  +P+ IDPT+
Sbjct:   84 ELPGKRTANTKTYQLSDGRTQAEISAVPVHYRDTKGRWQAIDTTVRPTTEKGYVQSNRTNTFSSLFGDTSKDLVRFEAEGRSIELGMAGAAKSVTPKVS--GSTVTYAGIAGGADVVYDVTSTALKEEIVLRKPPVGPVSWTFTLDTAGLTAQQRTDGSIAFVRPSGGEPVFVMPAPFMYDSKDDKASPLGKVWSDKVTQRVQQVYGQTSVTVSADAAWLT-DPARVYPVVIDPTI 316          
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Match: A0A6I4MID3_9ACTN (DNRLRE domain-containing protein n=1 Tax=Actinomadura physcomitrii TaxID=2650748 RepID=A0A6I4MID3_9ACTN)

HSP 1 Score: 82.0 bits (201), Expect = 9.350e-13
Identity = 73/245 (29.80%), Postives = 119/245 (48.57%), Query Frame = 1
Query:  130 GFDARTSTEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGDDGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWK-AIEGHTAKPRIERDGVSVRYHDVWPGVDIVYTV-RGVGVEELIEITRPDADVSSLAFEIGDARVEQRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQ-------------IAHDGT--VGVSIDRDWVKRQPSDRFPITIDPT 813
            GFD + S EDP+ R+ +   Y N DG+ T   ++  V+Y DS+G WQPIDS+LV   +G  RN+A+   V  +  +        + G   R+   ++G TA  + +  G ++ Y D+ P  D++  V  G  V+E I +   +A  +   F +    +  R  A+G +  V +SK  VA    +   GF++D++ N                   DG   + VS D+ W+   P+  +P+TIDPT
Sbjct:   39 GFDPKRSVEDPSQRTRYGYRYKNPDGTWTARVNTRPVNYQDSDGSWQPIDSSLVREGNGRWRNKADQNRVDLAGRATGRDLAVLEMGTGKRFGFGVDGATAT-QAQAQGDTITYRDLRPDSDLLLQVLNGASVKEKIVLRTQNAP-AEWEFPLRTDGLTPRLAANGSIELV-DSKGEVAGRIPH---GFMIDSKVNARSGDPARSESVSYSLEKRDGAWALKVSADKTWLA-DPARVYPVTIDPT 276          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11556.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K0U1H6_9ACTN7.860e-6137.19Uncharacterized protein (Fragment) n=2 Tax=Actinom... [more]
UPI001CA63A741.030e-1931.42LamG domain-containing protein n=1 Tax=Streptomyce... [more]
A0A8J3VF43_9ACTN5.450e-1629.73Uncharacterized protein n=2 Tax=Rhizocola hellebor... [more]
UPI0017F2886C1.300e-1531.70Uncharacterized protein n=1 Tax=Saccharothrix sp. ... [more]
A0A4R0HY56_9ACTN1.700e-1328.31DNRLRE domain-containing protein n=1 Tax=Kribbella... [more]
A0A7X5ZZV8_9ACTN5.310e-1326.28RHS repeat-associated protein n=2 Tax=Kribbella sh... [more]
A0A1H9V424_9PSEU5.370e-1327.44Intein C-terminal splicing region/RHS repeat-assoc... [more]
UPI0018CE85176.650e-1326.14PA14 domain-containing protein n=1 Tax=Mesorhizobi... [more]
A0A1Q5AG32_9ACTN7.030e-1329.66TGFb_propeptide domain-containing protein n=2 Tax=... [more]
A0A6I4MID3_9ACTN9.350e-1329.80DNRLRE domain-containing protein n=1 Tax=Actinomad... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11556contigP-wetherbeei_contig11556:162..1508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog345341.KUTG_01099
PFAMsEndonuclea_NS_2,Enterotoxin_a,Laminin_G_3,PT-HINT,RHS_repeat
Model size1347
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.45e-17
EggNOG OGsCOG3209@1|root,COG3209@2|Bacteria,2GMBB@201174|Actinobacteria,4E2E3@85010|Pseudonocardiales
DescriptionTIGRFAM RHS repeat-associated core domain
Cds size1347
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185916.5881886-CDS-P-wetherbeei_contig11556:161..15081683185916.5881886-CDS-P-wetherbeei_contig11556:161..1508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11556 162..1508 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11556.1.1prot_P-wetherbeei_contig11556.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11556 162..1508 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11556.1.1

>prot_P-wetherbeei_contig11556.1.1 ID=prot_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=449bp
SEAQALSRPETAGPVAAGSIVRPDAGESPTATPEELPRAVAPAGFDARTS
TEDPTGRSAFETLYINADGSHTVVASSDAVHYSDSEGQWQPIDSTLVVGD
DGTIRNRANSWSVAFSDISVDGVSFTTDRGDVLRWKAIEGHTAKPRIERD
GVSVRYHDVWPGVDIVYTVRGVGVEELIEITRPDADVSSLAFEIGDARVE
QRSDASGLVISVGESKLYVAAPETYDATGFLVDAEGNVTQIAHDGTVGVS
IDRDWVKRQPSDRFPITIDPTLTGLATTVVTSFPTPGQGYTAINDGFGRV
GNPTVAGKPNLRWRGNIGWNYTSYLGYRVTNATVTSTVASGSATGNRNYD
VYWADEYGYHASAVPRTLPPPYPNGNGWTPYGSAVMGNAGTASNVNLTPL
FDYWFRNSIAGGLLLFKGDETAALYTVKKYSTTLSVTYNVPPSAPTASG
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mRNA from alignment at P-wetherbeei_contig11556:162..1508+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11556.1.1 ID=mRNA_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig11556:162..1508+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGAAGCGCAAGCGCTGAGCCGTCCGGAGACCGCCGGGCCCGTCGCTGC CGGTTCGATCGTGCGCCCCGACGCCGGAGAATCTCCGACGGCGACGCCCG AAGAGCTGCCGCGTGCGGTCGCACCTGCCGGCTTCGACGCTCGAACCTCG ACGGAGGATCCAACTGGGCGCAGCGCATTTGAAACCCTGTACATCAACGC AGATGGTTCGCACACTGTGGTCGCCTCGTCCGACGCCGTGCACTACAGCG ATTCCGAAGGGCAGTGGCAACCGATCGACTCGACGCTCGTCGTTGGGGAC GACGGAACCATCCGCAACCGTGCGAACAGCTGGTCGGTCGCGTTCAGCGA TATCTCGGTCGACGGAGTTTCGTTCACGACTGACCGCGGTGACGTCCTCC GTTGGAAGGCAATCGAAGGTCATACGGCGAAACCGAGAATCGAGCGTGAC GGTGTGTCGGTTCGCTACCACGACGTGTGGCCCGGTGTCGACATCGTCTA CACAGTTCGCGGTGTCGGTGTCGAGGAGCTCATCGAGATCACGCGCCCCG ACGCCGACGTTTCCTCACTAGCGTTCGAGATCGGAGACGCCCGCGTCGAG CAACGATCGGACGCATCGGGACTCGTCATCTCGGTAGGCGAATCCAAGCT CTACGTTGCGGCGCCCGAAACCTATGACGCGACCGGCTTCCTGGTCGACG CGGAGGGAAACGTTACGCAGATTGCACACGACGGAACAGTTGGTGTCAGC ATCGATCGCGACTGGGTCAAGCGCCAGCCATCCGATCGATTCCCGATCAC CATCGATCCGACCCTGACAGGACTGGCGACGACCGTCGTCACGTCCTTCC CAACGCCAGGACAGGGATACACCGCGATCAACGACGGCTTCGGTCGAGTC GGCAACCCGACCGTCGCCGGCAAGCCGAACCTGCGCTGGCGCGGGAACAT CGGCTGGAACTACACCTCATACCTCGGCTATCGAGTCACCAACGCAACCG TCACATCCACCGTCGCGTCCGGATCCGCTACAGGCAACCGAAACTACGAC GTCTACTGGGCGGACGAATACGGCTACCACGCCTCCGCGGTCCCCCGCAC CCTGCCACCGCCCTACCCCAACGGCAACGGATGGACGCCCTACGGCTCGG CCGTCATGGGCAACGCAGGCACAGCGTCGAACGTGAACCTGACCCCGTTG TTCGACTACTGGTTCCGCAACTCCATCGCCGGCGGCCTACTCCTGTTCAA GGGCGACGAAACCGCAGCGCTCTACACAGTCAAAAAGTACTCCACCACCC TGTCGGTGACGTACAACGTCCCACCCTCCGCACCGACCGCCTCCGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11556:162..1508+

>mRNA_P-wetherbeei_contig11556.1.1 ID=mRNA_P-wetherbeei_contig11556.1.1|Name=mRNA_P-wetherbeei_contig11556.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig11556:162..1508+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGAAGCGCAAGCGCTGAGCCGTCCGGAGACCGCCGGGCCCGTCGCTGC
CGGTTCGATCGTGCGCCCCGACGCCGGAGAATCTCCGACGGCGACGCCCG
AAGAGCTGCCGCGTGCGGTCGCACCTGCCGGCTTCGACGCTCGAACCTCG
ACGGAGGATCCAACTGGGCGCAGCGCATTTGAAACCCTGTACATCAACGC
AGATGGTTCGCACACTGTGGTCGCCTCGTCCGACGCCGTGCACTACAGCG
ATTCCGAAGGGCAGTGGCAACCGATCGACTCGACGCTCGTCGTTGGGGAC
GACGGAACCATCCGCAACCGTGCGAACAGCTGGTCGGTCGCGTTCAGCGA
TATCTCGGTCGACGGAGTTTCGTTCACGACTGACCGCGGTGACGTCCTCC
GTTGGAAGGCAATCGAAGGTCATACGGCGAAACCGAGAATCGAGCGTGAC
GGTGTGTCGGTTCGCTACCACGACGTGTGGCCCGGTGTCGACATCGTCTA
CACAGTTCGCGGTGTCGGTGTCGAGGAGCTCATCGAGATCACGCGCCCCG
ACGCCGACGTTTCCTCACTAGCGTTCGAGATCGGAGACGCCCGCGTCGAG
CAACGATCGGACGCATCGGGACTCGTCATCTCGGTAGGCGAATCCAAGCT
CTACGTTGCGGCGCCCGAAACCTATGACGCGACCGGCTTCCTGGTCGACG
CGGAGGGAAACGTTACGCAGATTGCACACGACGGAACAGTTGGTGTCAGC
ATCGATCGCGACTGGGTCAAGCGCCAGCCATCCGATCGATTCCCGATCAC
CATCGATCCGACCCTGACAGGACTGGCGACGACCGTCGTCACGTCCTTCC
CAACGCCAGGACAGGGATACACCGCGATCAACGACGGCTTCGGTCGAGTC
GGCAACCCGACCGTCGCCGGCAAGCCGAACCTGCGCTGGCGCGGGAACAT
CGGCTGGAACTACACCTCATACCTCGGCTATCGAGTCACCAACGCAACCG
TCACATCCACCGTCGCGTCCGGATCCGCTACAGGCAACCGAAACTACGAC
GTCTACTGGGCGGACGAATACGGCTACCACGCCTCCGCGGTCCCCCGCAC
CCTGCCACCGCCCTACCCCAACGGCAACGGATGGACGCCCTACGGCTCGG
CCGTCATGGGCAACGCAGGCACAGCGTCGAACGTGAACCTGACCCCGTTG
TTCGACTACTGGTTCCGCAACTCCATCGCCGGCGGCCTACTCCTGTTCAA
GGGCGACGAAACCGCAGCGCTCTACACAGTCAAAAAGTACTCCACCACCC
TGTCGGTGACGTACAACGTCCCACCCTCCGCACCGACCGCCTCCGGC
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