mRNA_P-wetherbeei_contig11550.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A6H5L901_9PHAE (LsmAD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L901_9PHAE) HSP 1 Score: 165 bits (418), Expect = 3.560e-41 Identity = 106/259 (40.93%), Postives = 142/259 (54.83%), Query Frame = 1 Query: 124 AYQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPF--LIDGAED--FQVVLKAVRSTQTRDDASDGG---LDENGASYHFSLSRVVHIRAEHFPMVQRKQ-PAGFATDADISGSV----QAGVERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVLGGSG 864 +Y++ CR+R + K+M+GER + + G +GV H+LTP GA+ ++V+++A + Q D S+GG +D G + S +V I + FPM + Q P G TD+DI G Q GVER LQ D SWV + M P G WDQF AN++LFNV STFDEN YTT LDT L+ ++ AE+MA EIEGK SSN H+REERN + D EE+R+SGVLG G Sbjct: 93 SYKMACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLTPGDDPRPGAKRGMYRVIMRAAK-VQGATDQSNGGQSKIDSRGGTLMLSGDDIVSIAVKRFPMQRSAQRPKGLGTDSDIGGRAGGGGQLGVERRLQAVDTSWVESSSNMSIP---------------QSGGGGAGKWDQFAANEKLFNVTSTFDENLYTTPLDTGSLSRAQMAHAERMAAEIEGKTSSNIHMREERNMLTEQDKAMGEEERFSGVLGTGG 335
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: D7FVW6_ECTSI (LsmAD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW6_ECTSI) HSP 1 Score: 158 bits (399), Expect = 7.580e-39 Identity = 107/279 (38.35%), Postives = 142/279 (50.90%), Query Frame = 1 Query: 103 ASMPQTRAYQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAED--------FQVVLKAVRSTQTRDDASDGG---LDENGASYHFSLSRVVHIRAEHFPMVQRKQ-PAGFATDADISGSV----QAGVERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKR---------LFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVLGGSG 864 A P + Y++ CR+R + K+M+GER + + G +GV H+LTP G E ++V+++A + Q D S+GG +D G + S +V I + FPM Q P G TD+DI G Q GVER+LQ D SWV + M P G WDQF AN++ LFNV STFDEN YTT LDT L+ ++ AE+MA EIEGK S N H+REERN + D EE+R+SGVLG G Sbjct: 79 AVAPGSDGYKMACRDRWMNVTKTMMGERAEITTTSGCVYEGVFHVLTP----GEEPRPGAKRGMYRVIMRAAK-VQGATDQSNGGQSKIDSRGGTLMLSGDDIVSIAVKRFPMQHSAQRPKGLGTDSDIGGRAGGGSQLGVERKLQAVDTSWVESSSNMSIP---------------QSGGGGAGKWDQFAANEKCGEVSAMCGLFNVTSTFDENLYTTPLDTGSLSRAQMAHAERMAAEIEGKTSGNIHMREERNMLTEQDKAMGEEERFSGVLGTGG 337
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A7S1TU51_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU51_9STRA) HSP 1 Score: 135 bits (341), Expect = 8.840e-31 Identity = 93/251 (37.05%), Postives = 129/251 (51.39%), Query Frame = 1 Query: 103 ASMPQTRAYQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQRKQPAG-FATDADISGSVQAGVERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVL 852 A+ P R L R+R + ++G+ V+ ++S+GT +GV H P A+D +V ++A R A DG + G++ VVHI + + AG F+TD DISG A ER LQ D SWVT G WDQFEAN+RL+ V +TFDEN YTT+LD K T ++R+AE++AREIEGK SSN H+ EER + + EE+R+SGV+ Sbjct: 38 AAAPSQRTAIL-LRDRFIHTLTKLVGKSVTARMSDGTQYEGVFHSAAPSAT--ADDHKVAIRAARLVAGT--AKDGFVP--GSTALLQWRNVVHIACLSVDLRRDAPSAGSFSTDTDISGGANATGERRLQAVDASWVT-------------------GEVDGNMAGRAGKWDQFEANERLYGVKNTFDENLYTTRLDKGKFTETQMREAERLAREIEGKKSSNVHMAEERGHKIDDTVT--EEERFSGVI 260
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A1Z5KM69_FISSO (LsmAD domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM69_FISSO) HSP 1 Score: 134 bits (338), Expect = 2.010e-30 Identity = 92/251 (36.65%), Postives = 129/251 (51.39%), Query Frame = 1 Query: 142 RERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPF-LIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPM--------VQRKQPAG-FATDADISGSVQAGVERELQMADQSWVTPAKPMPTP----PXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVL 852 RER L +M+G++V + L +G G+ H TPF + + + VLKAV Q + G + G + +S+VVH+ + M V P G F TD +ISG +G + L A +W TP P+ GGWDQF+AN++LFNV +++DEN YTT+LD S + +++ AE++AREIEG ASSNPH+ EER + GD D EED YSGVL Sbjct: 60 RERFLHLLLNMVGQKVQMTLVDGAVYGGIFHTATPFPSLPADQRHKFVLKAVSILQAPKEQHAGV--KAGQTLVVDMSQVVHLHLKSIRMDALTNNNNVTSSNPNGSFQTDTEISGK-NSGGNKGLVAAGSAWTTPIASPPSSGNGNSRADALLGNAPRPVQAGLQGSIGGWDQFKANEQLFNVKASYDENLYTTELDKSTMDQEKIEHAEKLAREIEGAASSNPHIAEERGHKIQGDYD--EEDLYSGVL 305
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: B7FW14_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FW14_PHATC) HSP 1 Score: 132 bits (332), Expect = 1.290e-29 Identity = 101/280 (36.07%), Postives = 139/280 (49.64%), Query Frame = 1 Query: 43 KVIPSRRNMAGGS-PPHPGGKASMPQTRAYQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFL-IDGAEDFQVVLKA---VRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQRKQPAGFA----TDADISGSVQAGVERELQMADQSWVTP-AKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVL 852 K +PS GG P P KA A + RER LG +++G +V V L +G L+G+ H T F ID Q VLK V++T A+ + A+ +S+VV + + + Q + P+ TD +IS + L A +W TP AK GGWDQF ANK LFNV ++FDEN+YTT LD + + Q++R+AE++A EIE S+N H+ EERNQ+V GD D EEDRYSGV+ Sbjct: 43 KAVPSAPPGLGGPRPTAPSTKAPSEAETATFVALRERYLGLCLNLVGHKVVVHLRDGRQLEGIFHTATSFASIDAKLRNQYVLKGTQTVKATTADSKANTVTPIQPNATVVLDMSKVVSLHCKSIRL-QHQVPSSSVDNSFTDTEISKGAARTNDAGLVAAGAAWTTPTAKAGGGIDTPVSTAGTVTPRSTTGLKASIGGWDQFRANKELFNVTASFDENQYTTVLDKNTVDAQKLREAEKLAAEIEKSVSTNWHVAEERNQVVQGDFD--EEDRYSGVI 319
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A1W0ACN4_9STRA (LsmAD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACN4_9STRA) HSP 1 Score: 118 bits (295), Expect = 2.910e-25 Identity = 91/247 (36.84%), Postives = 126/247 (51.01%), Query Frame = 1 Query: 142 RERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQRKQPAG---------FATDADISGSVQAGV-ERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVL 852 R R L F+ +G V V L + + GVLH + P +DF VV+K +TQ + + NG+++ + HI +E ++ A F TD DIS +++A + RELQ A SW+ P+ G W+QFE N++LF V STFDEN YTT+L+ SK+TP+++R AEQMAREIE + SSN HL EERN D + DEE RYS V+ Sbjct: 41 RHRALYIFRFYVGRTVQVTLRDKSKYTGVLHCIDP------DDFTVVVK---NTQRLTEDPTKPFN-NGSTFVIQHFLLAHISSEGLSDYHQETGATQRLPYNSGTFQTDTDISNNLKAHLFGRELQTAS-SWLDPS----------------LDTGELERGNNKGNWNQFEVNEKLFGVTSTFDENLYTTKLEKSKITPEQIRAAEQMAREIESQTSSNFHLMEERNLSAERD-EIDEETRYSSVV 259
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A662XG07_9STRA (LsmAD domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XG07_9STRA) HSP 1 Score: 118 bits (295), Expect = 7.600e-25 Identity = 99/264 (37.50%), Postives = 135/264 (51.14%), Query Frame = 1 Query: 103 ASMPQTRAYQLGCRERLLGAFKSMIGERVSVQL-SEGTALDGVLHLLTPFLIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQ--------RKQPAGFATDADISGSVQAGVE-RELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASS-NPHLREERNQIVGG----DLDGDEEDRYSGV 849 AS P T A+Q R R L AF+ ++G+ V +QL S G GVL + P +DF +VLK+ + +A G E+G++ F S+V H+ A+ GF TD +ISG + RELQ A SW+ PA GW+QFEAN++LF V STFDEN YTT+LD SK++ ++ R AE++A+EIE +AS+ N HL+EER Q G + D DEE RYS V Sbjct: 83 ASPPPTHAHQRLLRHRALFAFRFLVGKAVELQLASSGARYAGVLDCVDP------DDFSMVLKSAKQLSAGAEA--GEPFESGSTVIFQRSQVAHLVADGSVNYTDGVVGAGGASVAGGFRTDTEISGRQGDHLYGRELQTAT-SWLDPAL------DSGELEDASSNGRRHSKNQGKAGWNQFEANEKLFGVVSTFDENIYTTKLDKSKISTEQSRAAERLAQEIERQASAGNFHLQEERGQTARGGKHVNNDLDEEARYSSV 331
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A7R9UGP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGP2_9STRA) HSP 1 Score: 112 bits (281), Expect = 7.780e-25 Identity = 90/291 (30.93%), Postives = 141/291 (48.45%), Query Frame = 1 Query: 10 LCCRTARGARAKVIPSRRNMAGGSPPH-------PGGKASMP-QTRAYQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQRKQPAG--FATDADISGSV-QAGVERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGV 849 + + A+GA AK P G PP P G P + L R+R L +G+ V ++++GT +GV H+ T A++ Q+ ++A R T + +G + + A + V+ + ++R PA F+TD+DISG + +R L D SW+ G WDQFE N+RL+ V +T+DEN YTT L+ + LTP+++ +A+++AR+IEGK SSNPH+ EER + +L EE+R+SGV Sbjct: 1 MAAKMAKGAWAKGPPK----LNGEPPKAVAVDAPPAGATEAPAMPKQNGLLARDRFLHTLVKFVGKPVIAKMADGTVYEGVWHVATAS--SPADEHQLAIRAARITAG--EVPEGFVPGSTALVQWRDVLCVNCLSVD---LRRDAPAAGAFSTDSDISGGAGRVAGDRALHSVDPSWI-------------------GANVEGGLSGKAGDWDQFEVNERLYGVQNTYDENLYTTALNKADLTPEQLTEADRIARQIEGKTSSNPHIAEERGHELRSNLT--EEERFSGV 259
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: K3WV04_GLOUD (LsmAD domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WV04_GLOUD) HSP 1 Score: 112 bits (281), Expect = 9.480e-24 Identity = 89/254 (35.04%), Postives = 132/254 (51.97%), Query Frame = 1 Query: 127 YQLGCRERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAEDFQVVLKAVRSTQTRDDASDGGLDENGASYHFSLSRVVHIRAEHFPMVQRKQPA-----------GFATDADISGSVQAGV-ERELQMADQSWVTPAKPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREER-NQIVGGDLDGDEEDRYSGV 849 +Q R R L AF+ +G+ V VQL + + GVL + P +DF +VLK TR + +G ++G++ F ++VH+ + +V + A GF TD +ISG + RELQ A+ SW+ P + GW+QFEAN++LF V S++DEN YTT+LD SK++ Q+ R+AE++A EIE + S+N HL+EER +Q D + DEE RYS V Sbjct: 82 HQRVLRHRALFAFRFFVGKAVEVQLDDASVYTGVLDCVDP------DDFSIVLK-----NTRRKSENGEAFQSGSTVIFKRQQIVHLSVDG--VVNYNEGALGAAAVSAAAGGFRTDTEISGRHHDHLFGRELQSAN-SWLDPKLDI-------------GELEDPRRRSSKSGWNQFEANEKLFGVVSSYDENIYTTKLDKSKISTQQSREAERIALEIERQTSTNFHLQEERGHQSAHHDDNLDEEARYSSV 308
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Match: A0A6S8VWH1_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8VWH1_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.810e-23 Identity = 90/269 (33.46%), Postives = 128/269 (47.58%), Query Frame = 1 Query: 142 RERLLGAFKSMIGERVSVQLSEGTALDGVLHLLTPFLIDGAE---DFQVVLKAVRSTQTRDDASDGGLDENG--ASYHFSLSRVVHIRAEHFPMVQRKQPAG-------------FATDADISGSVQAGVERELQMADQSWVTPA--------------KPMPTPPXXXXXXXXXXXXXXXXXXXXXGGWDQFEANKRLFNVNSTFDENKYTTQLDTSKLTPQEVRKAEQMAREIEGKASSNPHLREERNQIVGGDLDGDEEDRYSGVL 852 RER L +++G+ VS+ L++G+ ++GV H TPF + G + V+KA R T+ +D G +E G S V + + + Q + A F TD DIS S A V +L MA SWVT K + G WDQF+AN+ F V ++FDE+ YTT LD + + ++ +A +MAREIEG+A++N HL EER Q + GD D EED+YSGVL Sbjct: 58 RERFLHLTLNLLGQTVSLTLTDGSEIEGVFHTFTPFQMSGKNKDRSNKYVIKAARITKQGED----GKNEVGPAGSLIVPAEEVSQLLVKSIRLEQANRSAAAAGNAPSNSNGDAFVTDTDIS-SGGAAVSDDLVMASSSWVTSEGGNGGGLDSGGLSNKADSSMGGRKGMFGTKTAGKDDSMRGNIGEWDQFKANEAQFGVKASFDESLYTTSLDKNSVDRKQKLEAARMAREIEGQATTNMHLAEERGQAIEGDYD--EEDKYSGVL 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11550.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11550.1.1 >prot_P-wetherbeei_contig11550.1.1 ID=prot_P-wetherbeei_contig11550.1.1|Name=mRNA_P-wetherbeei_contig11550.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=436bp GAPLCCRTARGARAKVIPSRRNMAGGSPPHPGGKASMPQTRAYQLGCRERback to top mRNA from alignment at P-wetherbeei_contig11550:2..1485- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11550.1.1 ID=mRNA_P-wetherbeei_contig11550.1.1|Name=mRNA_P-wetherbeei_contig11550.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1484bp|location=Sequence derived from alignment at P-wetherbeei_contig11550:2..1485- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11550:2..1485- >mRNA_P-wetherbeei_contig11550.1.1 ID=mRNA_P-wetherbeei_contig11550.1.1|Name=mRNA_P-wetherbeei_contig11550.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1308bp|location=Sequence derived from alignment at P-wetherbeei_contig11550:2..1485- (Phaeothamnion wetherbeei SAG_119_79)back to top |