mRNA_P-wetherbeei_contig11548.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: D8LES3_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LES3_ECTSI) HSP 1 Score: 84.3 bits (207), Expect = 2.420e-17 Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 7 ADEAIAFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 ADE +A+ LQ+ +Q +V D AR+AFQS VRAYA R+ DS+ +FQVR+LHLGHVARSF LKDPP+AV Sbjct: 1089 ADEQLAYELQQGLQLLVAGDKPLLDRARSAFQSHVRAYAARAPDSRAVFQVRSLHLGHVARSFALKDPPTAV 1160
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A835Z9X5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X5_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.370e-17 Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 10 DEAIAFSLQRTIQEMVDADTAKKAM---ARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 DE +A+ LQ+ +Q +V+ + A+ + ARAAFQS VRAYAT SAD+K+ FQVR LHLGHVARSF LKD P+A+ Sbjct: 900 DEEVAYELQQGLQALVEGEGARGELLKKARAAFQSHVRAYATHSADTKQAFQVRALHLGHVARSFALKDAPAAI 973
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: C3Z545_BRAFL (DUF4217 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z545_BRAFL) HSP 1 Score: 72.4 bits (176), Expect = 7.930e-14 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 GSADEAI---AFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 G+A +A+ A SLQ + V +D K AMAR A+QSF+RAYAT + K IF VR LHLGHVA+SFGL+D P + Sbjct: 64 GAAQQAVQEAATSLQMAFENYVLSDQDKLAMARKAYQSFIRAYATFPSSLKHIFHVRKLHLGHVAKSFGLRDAPGDI 140
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A8K0AC96_BRALA (DDX31 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0AC96_BRALA) HSP 1 Score: 72.0 bits (175), Expect = 5.120e-13 Identity = 41/77 (53.25%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 1 GSADEAI---AFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 G+A +A+ A SLQ + V +D K AMAR A+QSF+RAYAT + K IF VR LHLGHVA+SFGL+D P + Sbjct: 556 GAAQQAVQEAATSLQMAFENYVLSDQDKLAMARKAYQSFIRAYATFPSTLKHIFHVRKLHLGHVAKSFGLRDAPGDI 632
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A1V9YZI0_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZI0_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 9.600e-13 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 13 EAIAFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSA 219 E I LQ ++ V AD+A MA AFQSFVR+YAT ++D+++ F VR+LH GHVA+SFGL++PP++ Sbjct: 613 EVIVHELQYLFEQSVLADSALFDMACQAFQSFVRSYATHASDTRQYFHVRSLHFGHVAKSFGLREPPAS 681
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A6P4YFN8_BRABE (RNA helicase n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YFN8_BRABE) HSP 1 Score: 71.2 bits (173), Expect = 9.630e-13 Identity = 40/77 (51.95%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 1 GSADEAI---AFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 G+A +A+ A SLQ + + V +D K AMAR A+QSF+RAYAT + K IF V+ LHLGHVA+SFGL+D P + Sbjct: 682 GAAQQAVQEAATSLQMSFENYVLSDQDKLAMARKAYQSFIRAYATFPSTLKHIFHVKKLHLGHVAKSFGLRDAPGDI 758
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A250X9K3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X9K3_9CHLO) HSP 1 Score: 71.2 bits (173), Expect = 9.650e-13 Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 4 SADEAIAFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 S+ A+A +LQ+ + V D+ + +A AF+SFVRAYAT D K IF VR LHLGHVA SFGLKD P+ + Sbjct: 791 SSGMAVACALQQALMRAVSNDSESQTLASNAFRSFVRAYATHPKDVKHIFNVRQLHLGHVAFSFGLKDAPAMI 863
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: A0A4U6VEY8_SETVI (Uncharacterized protein n=4 Tax=Panicoideae TaxID=147369 RepID=A0A4U6VEY8_SETVI) HSP 1 Score: 70.5 bits (171), Expect = 1.770e-12 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 25 FSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 SLQR+++ V A+ A K +AR AF S+VRAY + K+IF V+ LHLGHVARSFGLK+ PS V Sbjct: 458 MSLQRSLEGFVTAEDATKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLV 523
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: C5YY81_SORBI (Uncharacterized protein n=8 Tax=Panicoideae TaxID=147369 RepID=C5YY81_SORBI) HSP 1 Score: 70.5 bits (171), Expect = 1.780e-12 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 25 FSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 SLQR+++ V A+ A K +AR AF S+VRAY + K+IF V+ LHLGHVARSFGLK+ PS V Sbjct: 505 MSLQRSLEAFVAAEDATKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLV 570
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Match: K3Z4Q8_SETIT (Uncharacterized protein n=10 Tax=PACMAD clade TaxID=147370 RepID=K3Z4Q8_SETIT) HSP 1 Score: 70.5 bits (171), Expect = 1.780e-12 Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 1 Query: 25 FSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIFQVRTLHLGHVARSFGLKDPPSAV 222 SLQR+++ V A+ A K +AR AF S+VRAY + K+IF V+ LHLGHVARSFGLK+ PS V Sbjct: 509 MSLQRSLEGFVTAEDATKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLV 574 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11548.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11548.1.1 >prot_P-wetherbeei_contig11548.1.1 ID=prot_P-wetherbeei_contig11548.1.1|Name=mRNA_P-wetherbeei_contig11548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp GSADEAIAFSLQRTIQEMVDADTAKKAMARAAFQSFVRAYATRSADSKRIback to top mRNA from alignment at P-wetherbeei_contig11548:1..356+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11548.1.1 ID=mRNA_P-wetherbeei_contig11548.1.1|Name=mRNA_P-wetherbeei_contig11548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=356bp|location=Sequence derived from alignment at P-wetherbeei_contig11548:1..356+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11548:1..356+ >mRNA_P-wetherbeei_contig11548.1.1 ID=mRNA_P-wetherbeei_contig11548.1.1|Name=mRNA_P-wetherbeei_contig11548.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=222bp|location=Sequence derived from alignment at P-wetherbeei_contig11548:1..356+ (Phaeothamnion wetherbeei SAG_119_79)back to top |