mRNA_P-wetherbeei_contig11539.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S2P167_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P167_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 2.720e-12 Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVL 355 ML G+PP+D D RF+M+A++ +LGE+L+ WG +SP A DLLQ IL A PR R T GQ+ H WV+ Sbjct: 309 MLVGLPPWDWATKEDLRFKMIAIDGQLGEMLRQWGRSVSPLATDLLQGILRAHPRDRLTFGQIMDHEWVI 378
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: D7G0N3_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N3_ECTSI) HSP 1 Score: 68.6 bits (166), Expect = 2.140e-9 Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 149 LTGVPPFDLP-HVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVL 355 L G+PPF +P RD+R ++AVERRL E+++ WG+ +S AV L+Q L+ +P R TV L +HPW++ Sbjct: 273 LAGIPPFHIPIPARDHRCHVIAVERRLLEVVRRWGLTMSDEAVSLIQACLLFDPSERSTVRDLQNHPWLM 342
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S2WT96_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WT96_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 1.580e-8 Identity = 30/73 (41.10%), Postives = 52/73 (71.23%), Query Frame = 2 Query: 146 MLTGVPPFDL---PHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVL 355 ++TGVPP+D+ P D RF+++ + +L +LL+ W + +SPSA DL+QR+L+ P +RPT+ ++ +HPW + Sbjct: 511 LITGVPPWDVKTGPFPTDRRFQLV-ITGQLDQLLRAWNIVISPSAQDLVQRLLLENPAQRPTIEEIRAHPWFV 582
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S1E3Y9_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E3Y9_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.180e-8 Identity = 29/72 (40.28%), Postives = 46/72 (63.89%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVLQE 361 ML G+PP++ D R++M+A + L +L+ W ++S A DLLQR+L+ PR R ++ ++ HPWVL E Sbjct: 55 MLVGLPPWEFARAEDPRYKMVA-KGGLARMLRSWNREVSAQAADLLQRMLMENPRERLSLCEVKDHPWVLDE 125
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S3L2F1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2F1_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 4.920e-8 Identity = 30/69 (43.48%), Postives = 47/69 (68.12%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWV 352 ML G+PP++ D RF+M+ V LG +L+ W ++SP AVDLLQ++L +PR+R ++ ++ HPWV Sbjct: 300 MLVGLPPWEFAREEDPRFKMV-VRGGLGRMLRSWDREISPEAVDLLQKMLREDPRQRLSLVEVQDHPWV 367
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S1CYY2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYY2_CYCTE) HSP 1 Score: 63.9 bits (154), Expect = 4.950e-8 Identity = 31/72 (43.06%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVLQE 361 ML G+PP++ D R+RM+ V+ L +LQ W +SP+A DLLQ++L+ PR R ++ ++ HPWVL E Sbjct: 194 MLVGLPPWEFAREEDPRYRMV-VKGGLQRMLQSWNRPVSPAASDLLQKMLMENPRERLSLCEVKDHPWVLDE 264
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S2UP25_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UP25_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 7.980e-7 Identity = 30/69 (43.48%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWV 352 MLTG + +PH D +F M L LL WG+ LSP DLL+RIL +PR R T+ ++ +HPW+ Sbjct: 381 MLTGNTSYQIPHPTDAQFYWMT--EGLPNLLDQWGVVLSPEGQDLLKRILTVDPRERSTLEEIQNHPWM 447
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A1E7EV49_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EV49_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 1.470e-6 Identity = 26/72 (36.11%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWVLQE 361 ML G+PP++ D R++M+ ++ +L +L W +S A DLLQ++L+ +PR+R ++ ++ HPWV+ E Sbjct: 161 MLVGLPPWEFARPEDPRYKMV-IKGKLARMLDSWKRPISAQAADLLQKMLMEDPRQRLSLTEVKDHPWVVGE 231
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S2DXP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DXP3_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 6.460e-6 Identity = 25/69 (36.23%), Postives = 41/69 (59.42%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWV 352 M TG P+ +P D+RF L + ++ WG+QLS DLLQ +++ P+ RP++ Q+ +HPW+ Sbjct: 28 MCTGYDPWTIPQDSDSRF-FYFTRGHLKKFMEEWGVQLSDDLFDLLQWMMMRNPKERPSLRQVRAHPWM 95
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Match: A0A7S2LTV4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LTV4_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 9.750e-6 Identity = 25/69 (36.23%), Postives = 44/69 (63.77%), Query Frame = 2 Query: 146 MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILVAEPRRRPTVGQLCSHPWV 352 +L G PF +P D FR +++++ L LQ + L S V+LLQ++L+A+P++R T+ ++ HPW+ Sbjct: 452 ILVGKKPFAMPDPNDTNFRRISIDKDLDGFLQAKNIHLDASIVNLLQKMLLADPQQRLTLSEIVDHPWM 520 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11539.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11539.1.1 >prot_P-wetherbeei_contig11539.1.1 ID=prot_P-wetherbeei_contig11539.1.1|Name=mRNA_P-wetherbeei_contig11539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=81bp MLTGVPPFDLPHVRDNRFRMMAVERRLGELLQMWGMQLSPSAVDLLQRILback to top mRNA from alignment at P-wetherbeei_contig11539:928..2137- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11539.1.1 ID=mRNA_P-wetherbeei_contig11539.1.1|Name=mRNA_P-wetherbeei_contig11539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1210bp|location=Sequence derived from alignment at P-wetherbeei_contig11539:928..2137- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11539:928..2137- >mRNA_P-wetherbeei_contig11539.1.1 ID=mRNA_P-wetherbeei_contig11539.1.1|Name=mRNA_P-wetherbeei_contig11539.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=243bp|location=Sequence derived from alignment at P-wetherbeei_contig11539:928..2137- (Phaeothamnion wetherbeei SAG_119_79)back to top |