mRNA_P-wetherbeei_contig1153.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: D7FJ52_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ52_ECTSI) HSP 1 Score: 386 bits (992), Expect = 2.440e-116 Identity = 247/583 (42.37%), Postives = 343/583 (58.83%), Query Frame = 2 Query: 152 KLGDVIRDSDAPTQATPA----ERLAASRATFYSLNALTRALDVTQGPGGAEAGIADPMMQVLTTQELREAGEACVESLLALIGCKSLELTKPFVSLITQCFCQLFERCESLNMVNAILDMQAVAEAKKATVGARIAAVTAQGALARTAGIRMVSLLPSTSAALGRQAKSSEPHVRVAALLALRDLVDGASAFGAPINPEVVRVCVRACADRCPEARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWASGISGTGLSPALEAVLAPIVKGLDDESPGVRLAMAEATGAVLAAAVDGAAAERDRRGVIAARDQDQDDTAEATAARAVAPQSQMDKLSARFREMSQDMKVSVGKLSDKKLPAIAPT-TLDNAILILSELFRRATFPT----LTSRDYMSGIAAAFVVLLRGAR--HRITAATVPAVIRSVLELLDSDRLPQNGNEACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGFAPLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLLA 1867 ++GD + +A QA A +R A ++ F++L++L L + G +D ELR EAC +L ++ K LE+T PF + +C Q+FE CESLN V A+LD+ + + +KA +R+A + A G +++ AG+R+VS+LP + AA +Q K E VR A+ A+R LV+GA G+ ++ EV++ V+A ADRCPE R A A ++ + LE ++A V+GLDDESP RLA A ATGA L+A V+G+AAE +R GVIAARDQD + + +EM +MKV + KL+DKK+P + + T D + LSELF RAT SR+YM+G+A AFV L R R+ + T P ++ +VL+LLD+DRLPQ E VRTAVEY++ +G+ A +PE Q ARE++ +LSEV GS+PPA+GF PL NEHQ+QVCLVELSHLT ALGQACAALKD+L L LL H SYGVRFEAAV L +LG+ALP+ AAGLL +CL ++ + + L+A Sbjct: 30 RIGDASQLVEAALQARVAASQDQRFATTKTLFFALSSLCGVLRLELRMKHLGQGKSD--------SELRADCEACNTTLQGVLSNKKLEVTAPFCRSVAECLSQVFELCESLNAVGAVLDLHKLLDNRKALPESRMAVLEALGEVSKAAGLRVVSVLPESVAAAAKQLKQPEALVRAKAVFAVRALVEGADGVGSSVHGEVLKAAVKATADRCPEVRVEAFKLCLSLAEA--------------------APNLAASSSPVPLETLVALCVRGLDDESPAARLAAAAATGAALSAGVEGSAAENERLGVIAARDQDHXXXXXXXXXXXXXXXXXXKTFANKLKEMGAEMKVGMAKLNDKKMPVLGDSLTPDKVVQFLSELFGRATAAVGQSQSQSREYMAGVAEAFVCLWRRPYMLQRVNSTTAPRLVGAVLDLLDTDRLPQGAGETGVVRTAVEYIIREGISAPLPELSQQLVAREMLQILSEVAGSAPPASGFPPLYNEHQIQVCLVELSHLTRALGQACAALKDTLADALSTLLAHPSYGVRFEAAVALASLGSALPWCAAGLLQQCLDEIQQQYDALMA 584
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A835Z1V0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V0_9STRA) HSP 1 Score: 295 bits (756), Expect = 6.350e-83 Identity = 233/647 (36.01%), Postives = 313/647 (48.38%), Query Frame = 2 Query: 194 ATPAERLAASRATFYSLNALTRALD-VTQGPGGAEAGIADPMMQVLTTQELREAGEACVESLLALIGCKSLELTKPFVSLITQCFCQLFERCESLNMVNAILDMQAVAEAKKATVGARIAAVTAQGALARTAGIRMVSLLPSTSAALGRQAKSSEPHVRVAALLALRDLVDGASAFGAPINPEVVRVCVRACADRCPEA------RAA------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWASGISGTGL-SPALEAVLAPIVKGLDDESPGVRLAMAEATGAVLAAAVDGAAAERDRRGVIAARDQDQDDTAEATA----------ARAVAPQSQMDKLSARFREMSQDMKVSVGKLSDKKLPAIAPTTLDNAILILSELFRRATFPTLTSRDYMSGIAAAFVVLLR--GARHRITAATVPAVIRSVLELLDSDRLPQNGNEACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGFAPLLNEHQLQV--------------------------------------------------CLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLLAP 1870 A P + +ASR FY+L+ + AL+ +T P A AG AD LR G V + LA++ LE+T PF L+ C C CE L+ + D+ A A+ K+ G R+AA+ G +A G+R+VS+LP+ AA G+ +SS+P VRVAA+ +L ++ G G ++ + RA +DRCPE RA L A S + S LE+VL P +GL+D SPGVR AMA A AVLAA+V+ R R +AA+D D A A QS +DK SAR +EMS +MK+ + N + + RAT+P+ +R++MSG AAA V LR RI + + ++R++L+L+++D+LPQNGNEAC VR++VE+V+ G+CA EG QL AREL+ VL EV G + P GF PLLNEHQLQV CLVELSHL ALGQA AALKD+L GCL PL+ H SYGVRFEAAV L A G+ LP AA L C+Q++ H + L AP Sbjct: 43 APPEQAFSASRRVFYALHDVLEALERLTVRP--AAAGAADV---------LRAQGPPAVTAALAVLSAPGLEVTPPFRRLVGACACAALGACEGLSAAATVYDLCAAADGKRCAAGTRVAALRVAGDVAALTGVRVVSVLPTAVAACGKHLRSSDPIVRVAAMESLSAIIAGVGDVGGAVHVNAAKYATRATSDRCPEVWSTPPPRACQSSSKAPFTNAWQHSTNGTKKHRSKKQCIDTRSVLRFVQVRSAAATCLAAIAASSSNFRSATLESVLLPCARGLEDASPGVRSAMATAVAAVLAASVE---LLRRRCSRLAAQDGDXXXXXXXXXXXXXXXXXXMASGSAAQSSIDKFSARLKEMSAEMKLR---------------SCSNNSASVHFYYCRATYPSPGTREFMSGAAAAMVAFLRHPDISKRIGSVSAVWLVRALLDLVETDKLPQNGNEACLVRSSVEHVVRAGLCAGANEGRQLLIARELLTVLGEVAGRAQPGQGFQPLLNEHQLQVTSSCHRFNARRLEVKSVLELGLXXXXXXXXXXXXXXXXXXXXXXXXXXXACLVELSHLVTALGQAAAALKDNLCGCLAPLVAHPSYGVRFEAAVALAAAGHGLPHAAAAQLRGCVQEIRAHYKALTAP 660
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A6H5K572_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K572_9PHAE) HSP 1 Score: 277 bits (709), Expect = 8.410e-77 Identity = 200/539 (37.11%), Postives = 271/539 (50.28%), Query Frame = 2 Query: 596 MVSLLPSTSAALGRQAKSSEPHVRVAALLALRDLVDGASAFGAPINPEVVRVCVRACADRCPEARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWASGISGTGLSPALEAVLAPIVKGLDDESPGVRLAMAEATGAVLAAAVDGAAAERDRRGVIAARDQDQDDTAEATAARAVAPQSQMDKLSARF----------------------------------------------------------------REMSQDMKVSVGKLSDKKLPAIAPT-TLDNAILILSELFRRATFPT----LTSRDYMSGIAAAFVVLLRGAR--HRITAATVPAVIRSVLELLDSDRLPQNGNEACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGFAPLLNEHQLQ--------------------------------------------VCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLLA 1867 +VS+LP + AA +Q K E VR A+ A+R LV+GA G+ ++ EV++V V+A ADRCPE R A A ++ + LE ++A V+GLDDESP RLA A ATGA L+A V+G+AAE +R GVIAARDQ + + + ++ KL +R+ +EM +MKV + KL++KK+PA+ + T + + LSELF RAT SR+YM+G+A AFV L R R+ + T P ++ +VL+LLD+DRLPQ E VRTAVEY++ +G+ A +PE Q ARE++ +LSEV GS+PPA+GF PL NEHQ+Q VCLVELSHLT ALGQACAALKD+L L LL H SYGVRFEAAV L +LG+ALP+ AAGLL +CL ++ + + L+A Sbjct: 354 VVSVLPESVAAAAKQLKQPEALVRAKAVFAVRALVEGAGGVGSSVHGEVLKVAVKATADRCPEVRVEAFKLCLSLAEA--------------------APNLAASSSPVPLETLVALCVRGLDDESPAARLAAAAATGAALSAGVEGSAAENERLGVIAARDQVCN-----------SGERRLGKLGSRYGNRWCHCCAVXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXGGGGGKTFANKLKEMGAEMKVGMAKLNEKKMPALGDSLTPEKVVQFLSELFGRATAAIGQSQSQSREYMAGVAEAFVCLWRRPNMLQRVNSTTAPRLVGAVLDLLDTDRLPQGAGETGVVRTAVEYIIREGISAPLPELSQQLVAREMLQILSEVAGSAPPASGFPPLYNEHQIQARQEECCQGQGNVTTLSRVLSTAIVSVRLTSFNLVKVMRQPNPQVCLVELSHLTRALGQACAALKDTLADALSTLLAHPSYGVRFEAAVALASLGSALPWCAAGLLQQCLDEIQQQYDALMA 861
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A7S1XLB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLB4_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 6.040e-16 Identity = 144/546 (26.37%), Postives = 220/546 (40.29%), Query Frame = 2 Query: 407 LTKPFVSLITQCFCQLFERCESLNMVNAILDMQAVAEAKKATVGARIAAVTAQGALARTAGIRMVSLLPSTSAALGRQAKSSEPHVRVAALLALRDLV-----------DGASAFGAPINPE-------VVRVCVRACADRCPEARAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLWASGISGTGLSPALEAVLAPIVKGLDDESPGVRLAMAEATGAVLAAAVDGAAAERDRRGVIAARDQDQDDTAEATAARAVAPQSQMDKLSARFREMSQDMKVSVGKLSDKKLPAIAPTTLDNAILILSELFRRATFPTLTSRDYMSGIAAAFVVLLRGARHRITAATVPAVIRSVLELLDSDRLPQ------------------------------------NGNEAC-----AVRTAVEYVLHDGVCARVPEGIQLAAARELIMV--LSEVVGSSPPAAGFAPLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETL 1861 L F SL + +C+L + N+ +A D+ + ++A G R+AA A G + + R+ SL+ AA R ++SSE +RVA L ALR L+ DG A G E +++ +A DR RAAA L A+ T ++P +L +G DES GV A ++A VL+AA+D + R V AAR D +TA A +R + +DK+ + ++ + +G+ L + TL+ + L ++ R S+ +GI + LL + RIT +P ++R L +L + N +AC +R V VL G A E +Q REL+ + + + AAG A +HQ+QVCL E+SHL AL A A L+ L L H + G+R EAAV + AL ALP L ++ M H ++L Sbjct: 92 LQAAFASLFSCYYCELGQG----NVFSAASDLLELCALRQAPYGLRVAAAAAVGNVMQRMSGRLSSLVGDVIAACLRLSRSSEACLRVAGLQALRKLLLGAGGGLFDSGDGGGADGKXXXXEADRGAAEIIKALGKALQDRHAGVRAAAVAVIGA----------------------LPAADDGMTAVAPL--TLLELCFRGFQDESMGVIAAASQAAADVLSAALDANVRGAESRAVDAARAGDLQETAVAEESRK--SMTTLDKMRSGLKD------IKLGRRRGNALEGLM--TLEAGVNFLMQMIPRLPHGP-GSQAAQTGIFDCWAALLERQKRRITENDLPVLVRQALGVLSPSAVEAAVRNAKSVAAAEISQTVSSXXXXXXXXXXXAQLNAANVRKACNREVALLRAGVASVLRRGFAATQGERVQQLLLRELVQLCFVQPALEDGGGAAG-ARYDGDHQIQVCLGEISHLVSALQDAAAPYARELLVALMKLCCHDTLGLRLEAAVAMAALFEALPAEFPAALEDIMRMMESHLKSL 597
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A7S4QY98_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QY98_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.290e-10 Identity = 54/173 (31.21%), Postives = 82/173 (47.40%), Query Frame = 2 Query: 1358 GARHRITAATVPAVIRSVLELLDSDRLPQNGNEACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVG-----SSPPAAGFAPLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETL 1861 G + A++ A R L +L S +A R A V+ G+ E +QLA R++ ++L G ++PP + +N HQLQV LVE+SHL A+G+A A+ + + L L H +GVR EAAV +A+ A P +L + DM H + Sbjct: 115 GGKAASAMASMGASFRGGLTMLRSSA------DAGLARLATGRVVRRGLAEASSEPVQLALLRDMALMLLGSTGGGDGVAAPPTGSKSAPMNRHQLQVVLVEVSHLIVAVGEAAASSLNDICPALEACLRHPDHGVRHEAAVACSAVATAFPCEGRRILKSRIDDMQSHMNEI 281
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A7S1Z2Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z2Z2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.020e-8 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 1520 EGIQLAAARELIMVLSEVVG-----SSPPAAGFAPLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETL 1861 E +QLA R++ ++L G ++PP + +N HQLQV LVE+SHL A+G+A A+ + + L L H +GVR EAAV +A+ A P +L + DM H + Sbjct: 11 EPVQLALLRDMALMLLGSTGGGDGVAAPPTDSKSAPMNRHQLQVVLVEVSHLIVAVGEAAASSLNDICPALEACLRHPDHGVRHEAAVACSAVATAFPCEGRRILKSRIDDMQSHMNEI 129
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: B7FRH8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRH8_PHATC) HSP 1 Score: 65.5 bits (158), Expect = 3.150e-7 Identity = 49/140 (35.00%), Postives = 69/140 (49.29%), Query Frame = 2 Query: 1451 NEACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGFAPLL--NEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLL 1864 N+A R A+ VL +G+ PE Q+ ELI+ L G + AP + N +QLQ+ LVE+SHL ALG+A A+ D V L L H GVR EAA+ +L + P L+ + +M H L+ Sbjct: 565 NDAGLARLALSRVLREGLSEVTPEPTQINFLHELILCLP---GKGDAESNEAPAVQWNANQLQIVLVEISHLLAALGEAAASRIDDAVIRLEICLEHMDQGVRHEAAIACASLTASFPTEGRKLVRSSIDEMQLHHAQLV 701
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A7S2M4Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M4Z2_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 2.030e-6 Identity = 41/120 (34.17%), Postives = 56/120 (46.67%), Query Frame = 2 Query: 1469 RTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGF----------APLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALP 1798 R V+ G+ V E IQL R+L + VG + P G +N HQLQV L+E+SH+ A+G+A A+ + L L L H +GVR EAA A+ A P Sbjct: 212 RLLASNVVRKGITENVSESIQLTILRDLATMCRSSVGHTSPDGGIDARRSLGGEKGKSMNRHQLQVALIEISHIVVAVGEAGASSLEDLHPILQDCLSHPDHGVRHEAAAVYAAIAQAFP 331
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A7S3L636_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L636_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 4.940e-6 Identity = 45/143 (31.47%), Postives = 70/143 (48.95%), Query Frame = 2 Query: 1466 VRTAVEYVLHDGVCARVPEGIQLAAARELIMVL-SEVVGSSPPAAGFAPL---------LNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLL 1864 VRT V + G+ V E +Q+ + + L + +S P + A LN +QLQV LVE+SHL +LG+A ++ + ++ + LL H GVRFEAAV TAL N P + + + ++ H L+ Sbjct: 3 VRTLVSRIFRQGLTEGVAEPVQIGLLDDWVSSLDAHHQSASSPGSEEAKTKGAFDSGKQLNANQLQVALVEISHLIASLGEAVSSKVEDILKAVRQLLEHTDTGVRFEAAVACTALVNNFPPVGSTIFPDLILEIQIHHSELM 145
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Match: A0A448ZH86_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZH86_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 7.380e-6 Identity = 40/140 (28.57%), Postives = 67/140 (47.86%), Query Frame = 2 Query: 1454 EACAVRTAVEYVLHDGVCARVPEGIQLAAARELIMVLSEVVGSSPPAAGFAPLLNEHQLQVCLVELSHLTHALGQACAALKDSLVGCLCPLLGHASYGVRFEAAVGLTALGNALPFFAAGLLSRCLQDMARHRETLLAPA 1873 + C R VL DG+ ++ E QL EL+ + S + L +QLQV LVE+SHL LG+A A+ + ++ L L H+++GVR EAAV ++ + P ++ C+ + +++ A Sbjct: 517 DGCIARLLTNQVLRDGLAQQMTEISQLKVLHELVDLCSNKQSA----------LQGNQLQVILVEISHLFATLGEATASSLEQILPGLLKCLSHSNHGVRHEAAVTFGSIASVFPSEGRKIVRECINKIQFEHAEMMSTA 646 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1153.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1153.1.1 >prot_P-wetherbeei_contig1153.1.1 ID=prot_P-wetherbeei_contig1153.1.1|Name=mRNA_P-wetherbeei_contig1153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=600bp MQLSPGRAQRANSGGGRVGLAQTAKKLGDVIRDSDAPTQATPAERLAASRback to top mRNA from alignment at P-wetherbeei_contig1153:1913..5385- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1153.1.1 ID=mRNA_P-wetherbeei_contig1153.1.1|Name=mRNA_P-wetherbeei_contig1153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3473bp|location=Sequence derived from alignment at P-wetherbeei_contig1153:1913..5385- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1153:1913..5385- >mRNA_P-wetherbeei_contig1153.1.1 ID=mRNA_P-wetherbeei_contig1153.1.1|Name=mRNA_P-wetherbeei_contig1153.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1800bp|location=Sequence derived from alignment at P-wetherbeei_contig1153:1913..5385- (Phaeothamnion wetherbeei SAG_119_79)back to top |