mRNA_P-wetherbeei_contig11492.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11492.1.1
Unique NamemRNA_P-wetherbeei_contig11492.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: D8LF05_ECTSI (Gamma-glutamyl transpeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF05_ECTSI)

HSP 1 Score: 289 bits (739), Expect = 1.410e-90
Identity = 164/282 (58.16%), Postives = 182/282 (64.54%), Query Frame = 1
Query:   70 ARLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPA----------------------VTSALRRMGHDVVTVEGEERSYVFGRAQVIVKDEAG---VLWCGSDGRGDGCGIAW 840
            A LH  IE LR AF D  W+CAD     VPV ELL   YA  RA  +      + DV +GSP   S TVSFQVVD  G AVSFVNSNYMGFG+GIVP+GCGF+LQ+RG NF LDP HPN LAPGKRPYHTIIP M T   TGE +A+ TNMG FMQPQGHVQLLS LL RG D QAA+DAPRFCI DG ANG  VALE   P A                      V S L+RMGHD+  V G  R  + GRAQ+I +  +G   VLWCGSDGR DGC +AW
Sbjct:  312 AYLHRLIEVLRLAFADTRWYCADMDKAEVPVKELLGQAYAAERARLFDPTRA-SVDVKKGSPTKSSCTVSFQVVDDRGNAVSFVNSNYMGFGSGIVPDGCGFSLQSRGSNFVLDPEHPNVLAPGKRPYHTIIPCMVTSEATGELFATMTNMGAFMQPQGHVQLLSNLLLRGMDPQAAIDAPRFCIRDGMANGA-VALEPWYPDAAAAAAGRDTPEGADKGGEGYEAVVSELQRMGHDIKVVRGHARCEM-GRAQIIQRKMSGGTQVLWCGSDGRADGCAVAW 590          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: W7TJT7_9STRA (Gamma-glutamyltranspeptidase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJT7_9STRA)

HSP 1 Score: 287 bits (735), Expect = 2.590e-90
Identity = 160/261 (61.30%), Postives = 178/261 (68.20%), Query Frame = 1
Query:   76 LHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERS-----YVFGRAQVIVKDEA-GVLWCGSDGRGDGCGIAW 840
            LH  +E +R AF D  +F ADPA    P+ +LLS  YA RR AG+       ADV  G+P   S TVSFQVVD AG AVSFVNSNYM FG+G+VP GCGF LQNRG NFSL P HPN LAPGKRP+HTIIPG+AT  ++G  +ASF+NMGGFMQPQGHVQLL  LL    D QAAVDAPRFCI DG A G   ALE+GI   V   LR  GH V    GEER       VFG+AQVIV+D   GVLW GSDGRGDGC   W
Sbjct:  305 LHQLLEVMRLAFADTRYFVADPALCPAPLPDLLSPAYAARRVAGFHPTRAQ-ADVQAGTPTRSSSTVSFQVVDPAGNAVSFVNSNYMHFGSGLVPRGCGFTLQNRGHNFSLSPTHPNVLAPGKRPFHTIIPGLATRLDSGALYASFSNMGGFMQPQGHVQLLLNLLLHRMDPQAAVDAPRFCIQDGSAQGA-AALEEGIEEDVLEELRARGHRVA---GEERRGYAHRVVFGKAQVIVRDPVTGVLWGGSDGRGDGCVYGW 560          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A7C4UK31_9CHLR (Gamma-glutamyltransferase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C4UK31_9CHLR)

HSP 1 Score: 281 bits (718), Expect = 1.670e-89
Identity = 153/255 (60.00%), Postives = 181/255 (70.98%), Query Frame = 1
Query:   73 RLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGI 834
            RLH  IEA+R AF DA+W+ +DP    +P+ ELLS  YA +R          T D  RG+PVS SDTV   VVD  G A SF+NSNYMGFGTGIVP+G GF LQNRG NFSLDP HPN LAP KRPYHTIIP M T A     +AS+  MGGFMQPQGHVQ+LSAL+D G D QAA+D PRFCI D   +GGRVA+E+G+P A  S L++MGH V +V G ER+ +FGR QVI++D E+GVL  GSD R DGC +
Sbjct:  162 RLHVMIEAMRLAFADASWYVSDPKFSTIPIKELLSKEYASQRRR-LIDKKRATVDQKRGTPVSSSDTVYLSVVDKFGNACSFINSNYMGFGTGIVPKGWGFTLQNRGYNFSLDPNHPNALAPLKRPYHTIIPAMVTRAADDSLYASYGVMGGFMQPQGHVQVLSALVDDGLDPQAALDQPRFCI-DVDESGGRVAIEEGMPDATFSGLKKMGHPVYSVSGYERA-LFGRGQVILRDAESGVLCAGSDPRADGCAM 413          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A6N6KYT2_9CHLR (Gamma-glutamyltransferase family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N6KYT2_9CHLR)

HSP 1 Score: 281 bits (718), Expect = 6.110e-88
Identity = 151/256 (58.98%), Postives = 180/256 (70.31%), Query Frame = 1
Query:   73 RLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGIA 837
            RLH +IEA+R AF D  WF ADP +   P++ELLS  YA+ R      +   T D  RG+P++ SDTV   VVD  G A SF+NSNYMGFGTG+VP+G GF +QNRG  FSLDP HPN LAP KRPYHTIIP M TH +TGE +ASF  MGGFMQPQGH+Q+  AL   G D QAA+D PRFCI DG A GG VALE+GIP    + L +MGH VV   G+ER+ VFGR QVI++D E+GVLW GSD R DG  ++
Sbjct:  292 RLHLEIEAMRLAFADTRWFVADPESNPAPLEELLSKEYAKERGKLLDPSKA-TVDQQRGAPMASSDTVYLTVVDGEGNACSFINSNYMGFGTGMVPKGWGFTMQNRGHGFSLDPDHPNALAPNKRPYHTIIPAMITHDDTGELFASFGVMGGFMQPQGHMQVALALSQDGLDPQAALDMPRFCITDGSA-GGNVALEEGIPVETMATLSQMGHKVVPTSGQERA-VFGRGQVILRDRESGVLWGGSDPRADGLAMS 544          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A1F8QN57_9CHLR (Gamma-glutamyltransferase n=1 Tax=Chloroflexi bacterium RBG_16_57_11 TaxID=1797651 RepID=A0A1F8QN57_9CHLR)

HSP 1 Score: 279 bits (713), Expect = 3.510e-87
Identity = 156/262 (59.54%), Postives = 180/262 (68.70%), Query Frame = 1
Query:   73 RLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATH-----AETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGIAW 840
            RLH QIEALR AF D  W+ ADPA   VPVDELL  GYA RR A     D    +  RG PV+ SDTV   VVD+ G A SF+NSNYMGFGTGIVP GCGF+LQNRG NFSLDP HPN LAP KRPYHTIIP +AT      A     +A F  MGGFMQPQGH+Q++  L+D G D QA +D PRFCI  G+ +G RVALE+GIP  V + L  MGH V+ V G ERS VFGR QVI++D ++GVL  GSD R DGC + +
Sbjct:  288 RLHLQIEALRLAFTDTRWYVADPAFGRVPVDELLDKGYAARRRA-MIHLDRAALNQQRGMPVAASDTVYLSVVDSQGDACSFINSNYMGFGTGIVPPGCGFSLQNRGHNFSLDPQHPNALAPRKRPYHTIIPALATRPAPNQAAPERLFACFGVMGGFMQPQGHLQVVVGLVDDGLDPQAVLDRPRFCITGGQVDG-RVALEEGIPDTVMADLAEMGHPVMPVSGFERS-VFGRGQVILRDPDSGVLCAGSDPRADGCAMTY 546          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A7C2X9U9_9CHLR (Gamma-glutamyltransferase family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2X9U9_9CHLR)

HSP 1 Score: 278 bits (710), Expect = 1.120e-86
Identity = 154/258 (59.69%), Postives = 179/258 (69.38%), Query Frame = 1
Query:   73 RLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTA--DVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGIA 837
            RLH +IEA+R AF D  W+ ADPA    PV+ L+S  YA +R       D   A  D+  G P  GSDTV F VVD  G A SF+NSNYMGFGTGIVP G GF+LQNRG+ FSLDP HPN LAPGKRPYHTIIP MAT  + G  +ASF  MGGFMQPQGHVQ++ AL D   D Q+A+D PRFCI DG A GG VALE GIP AV + L RMGH V  V+G ER+ +FGR Q+I++D  +G LW GSD R DGC +A
Sbjct:  298 RLHLEIEAMRLAFADTRWYVADPAFSPAPVEGLVSKEYAAQRR---RLIDPRRAAPDLQHGFPTPGSDTVYFCVVDGEGNACSFINSNYMGFGTGIVPSGWGFSLQNRGQCFSLDPHHPNALAPGKRPYHTIIPAMATREDDGSLFASFGVMGGFMQPQGHVQVVVALADDDLDPQSALDRPRFCIADGAA-GGTVALETGIPSAVQAELSRMGHPVEAVQGFERA-IFGRGQIILRDPRSGALWGGSDPRADGCAMA 550          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A3N5ME65_9CHLR (Gamma-glutamyltransferase family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5ME65_9CHLR)

HSP 1 Score: 275 bits (703), Expect = 9.890e-86
Identity = 154/264 (58.33%), Postives = 179/264 (67.80%), Query Frame = 1
Query:   52 TVAQMTARLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGIAW 840
            T A    RLH +IEA+R AF DA W+ ADPA    P+D LLS  YA  R A        T D  RG+PV+GSDTV F VVD  G A SF+NSNYMGFGTGIVP G GF+LQNRG NFSLD  HPN L P KRPYHTIIP MAT       +ASF  MGGFMQPQGH+Q++ AL+D G D QAA+D PRFCI DG A+G  VALE+GIP A    L  MGH V  V G  R+ +FGR Q+I++D ++GVL  GSD R DGC +A+
Sbjct:  282 TQALSAGRLHLEIEAMRLAFADARWYVADPAFNPAPLDALLSKEYAAERRA-LIDPRRATLDQKRGAPVAGSDTVYFSVVDGDGNACSFINSNYMGFGTGIVPSGWGFSLQNRGHNFSLDRDHPNALMPDKRPYHTIIPAMATRQSDDSLYASFGVMGGFMQPQGHMQVVVALVDDGLDPQAALDCPRFCIQDGTASG-EVALEEGIPVAAMGQLAEMGHPVAPVSGMGRA-LFGRGQIIMRDPDSGVLCGGSDPRADGCAMAY 542          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A0S8I8I4_9CHLR (Glutathione hydrolase proenzyme n=2 Tax=unclassified Anaerolineae TaxID=1081798 RepID=A0A0S8I8I4_9CHLR)

HSP 1 Score: 273 bits (698), Expect = 5.670e-85
Identity = 151/258 (58.53%), Postives = 175/258 (67.83%), Query Frame = 1
Query:   67 TARLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKD-EAGVLWCGSDGRGDGCGIA 837
            T RLH  IEALR AF D  W+ ADP    +P++ELLS  YA  R  G       T D   G+PV+ SDTV    VD  G A SF+NSNYMGFGTGIVP+G GF LQNRG  FSLDP HPN LAPGKRPYHTIIPG+ATH E G   ASF  MGGFMQPQGH+Q+L AL+D   D QAA+D PR CI+ G   G  VALE+GIP  + + L +MGH V  + G ER+ +FGR Q+I+ D E GVLW GSD R DGC +A
Sbjct:  288 TKRLHLIIEALRLAFADTRWYIADPVFSPLPLEELLSKSYAAERR-GLINPQQATLDQRYGTPVADSDTVYLTAVDEYGNACSFINSNYMGFGTGIVPKGWGFTLQNRGHGFSLDPTHPNALAPGKRPYHTIIPGLATH-EDGSLLASFGVMGGFMQPQGHLQVLQALIDDDLDPQAALDRPRICIVGGNPEG-NVALEEGIPSRILANLTKMGHHVEKIRGYERA-LFGRGQIILVDPEYGVLWGGSDPRADGCALA 541          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A350WVY3_9CHLR (Glutathione hydrolase proenzyme n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350WVY3_9CHLR)

HSP 1 Score: 271 bits (693), Expect = 3.010e-84
Identity = 146/251 (58.17%), Postives = 172/251 (68.53%), Query Frame = 1
Query:   73 RLHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYVFGRAQVIVKDEAGVLWCGSDGRGDG 825
            ++H  IEA+R AF DA W+ +DPA   +P+ ELLS  YA  R          T D  RGSPV+ S TV   VVD  G A SF+NSNYMGFGTGIVP+G GF LQNRG NFSLDP HPN LAPGKRPYHTIIP M T       +AS+  MGGFMQPQGHVQ+LSAL D G D Q+A+D PRFC LD  + GG+V +E+G+P    + LR MGH +  V G ER+ VFGR QVI++DE+GVL  GSD R DG
Sbjct:  289 KMHVMIEAIRLAFADAKWYVSDPAFAKIPMKELLSKEYASERRK-LIDLKRATVDPQRGSPVNSSGTVYLSVVDGMGNACSFINSNYMGFGTGIVPKGWGFTLQNRGHNFSLDPNHPNVLAPGKRPYHTIIPAMVTRVADNSLYASYGVMGGFMQPQGHVQVLSALKDAGLDPQSALDLPRFC-LDADSAGGKVDIEEGMPIETVNTLREMGHPLNEVSGYERA-VFGRGQVILRDESGVLCGGSDPRADG 536          
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Match: A0A4D9CY46_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CY46_9STRA)

HSP 1 Score: 279 bits (714), Expect = 3.070e-84
Identity = 157/256 (61.33%), Postives = 177/256 (69.14%), Query Frame = 1
Query:   76 LHAQIEALRFAFVDAAWFCADPAAVVVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAAGGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRPYHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAAVDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERS-----YVFGRAQVIVKDEA-GVLWCGSDGRGDG 825
            LH  +E +R AF D  +F ADPA    P+ +LLS  YA RR  G+       ADV  G+P   S TVSFQVVD AG AVSFVNSNYM FG+G+VP+GCGF+LQNRG NFSL P HPN LAPGKRP+HTIIPG+AT  ++G  +ASF+NMGGFMQPQGHVQLL  LL    D QAAVDAPRFCI DG A G   ALE+GI   V   LR  GH V    GEER       VFG+AQVIV+D   GVLW GSDGRGDG
Sbjct:  305 LHLLLEVMRLAFADTRFFVADPALCPAPLPDLLSPAYAARRVIGFHPTRAQ-ADVQAGTPTRSSSTVSFQVVDPAGNAVSFVNSNYMHFGSGLVPQGCGFSLQNRGHNFSLSPSHPNVLAPGKRPFHTIIPGLATRLDSGALYASFSNMGGFMQPQGHVQLLLNLLLHRMDPQAAVDAPRFCIQDGSAQGA-AALEEGIEEDVLEELRARGHRVA---GEERRGYVHRVVFGKAQVIVRDPVTGVLWGGSDGRGDG 555          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11492.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF05_ECTSI1.410e-9058.16Gamma-glutamyl transpeptidase n=2 Tax=Ectocarpus T... [more]
W7TJT7_9STRA2.590e-9061.30Gamma-glutamyltranspeptidase n=2 Tax=Nannochlorops... [more]
A0A7C4UK31_9CHLR1.670e-8960.00Gamma-glutamyltransferase n=1 Tax=Anaerolineae bac... [more]
A0A6N6KYT2_9CHLR6.110e-8858.98Gamma-glutamyltransferase family protein n=1 Tax=C... [more]
A0A1F8QN57_9CHLR3.510e-8759.54Gamma-glutamyltransferase n=1 Tax=Chloroflexi bact... [more]
A0A7C2X9U9_9CHLR1.120e-8659.69Gamma-glutamyltransferase family protein n=1 Tax=C... [more]
A0A3N5ME65_9CHLR9.890e-8658.33Gamma-glutamyltransferase family protein n=1 Tax=C... [more]
A0A0S8I8I4_9CHLR5.670e-8558.53Glutathione hydrolase proenzyme n=2 Tax=unclassifi... [more]
A0A350WVY3_9CHLR3.010e-8458.17Glutathione hydrolase proenzyme n=1 Tax=Anaeroline... [more]
A0A4D9CY46_9STRA3.070e-8461.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11492contigP-wetherbeei_contig11492:223..2124 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LF05
PFAMsG_glu_transpept
Model size843
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00090,RC00096
KEGG koko:K00681
KEGG ReactionR00494,R01262,R01687,R03867,R03916,R03970,R03971,R04935
KEGG Pathwayko00430,ko00460,ko00480,ko01100,map00430,map00460,map00480,map01100
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.31e-91
EggNOG OGsCOG0405@1|root,KOG2410@2759|Eukaryota
EC2.3.2.2,3.4.19.13
Descriptionglutathione hydrolase activity
Cds size843
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185913.9749362-CDS-P-wetherbeei_contig11492:222..4511683185913.9749362-CDS-P-wetherbeei_contig11492:222..451Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11492 223..451 +
1683185913.9883797-CDS-P-wetherbeei_contig11492:634..9481683185913.9883797-CDS-P-wetherbeei_contig11492:634..948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11492 635..948 +
1683185913.9993527-CDS-P-wetherbeei_contig11492:1492..17141683185913.9993527-CDS-P-wetherbeei_contig11492:1492..1714Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11492 1493..1714 +
1683185914.0067592-CDS-P-wetherbeei_contig11492:2046..21241683185914.0067592-CDS-P-wetherbeei_contig11492:2046..2124Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11492 2047..2124 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11492.1.1prot_P-wetherbeei_contig11492.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11492 223..2124 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11492.1.1

>prot_P-wetherbeei_contig11492.1.1 ID=prot_P-wetherbeei_contig11492.1.1|Name=mRNA_P-wetherbeei_contig11492.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=281bp
AAANAGSDACPCVGGGETVAQMTARLHAQIEALRFAFVDAAWFCADPAAV
VVPVDELLSDGYAQRRAAGWTAADTDTADVVRGSPVSGSDTVSFQVVDAA
GGAVSFVNSNYMGFGTGIVPEGCGFALQNRGENFSLDPVHPNTLAPGKRP
YHTIIPGMATHAETGEFWASFTNMGGFMQPQGHVQLLSALLDRGADAQAA
VDAPRFCILDGRANGGRVALEDGIPPAVTSALRRMGHDVVTVEGEERSYV
FGRAQVIVKDEAGVLWCGSDGRGDGCGIAW*
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mRNA from alignment at P-wetherbeei_contig11492:223..2124+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11492.1.1 ID=mRNA_P-wetherbeei_contig11492.1.1|Name=mRNA_P-wetherbeei_contig11492.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1902bp|location=Sequence derived from alignment at P-wetherbeei_contig11492:223..2124+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGCTGCGAACGCCGGAAGCGACGCATGCCCGTGCGTTGGCGGTGGCGA GACGGTCGCCCAGATGACCGCCCGCCTCCACGCGCAGATCGAGGCGCTGC GGTTCGCCTTTGTGGACGCCGCCTGGTTCTGCGCCGACCCCGCTGCGGTC GTGGTCCCGGTGGACGAACTGTTGAGCGACGGGTACGCCCAGCGGCGGGC GGCGGGGTGGACAGCGGCGGACACCGACAGTGGCGGCAACGGCGCTGGCG ATGGTAGCGGCGGCGGCAGTGGCGACGCTTCCGGCTGTAGCGGCGGCGGT GACGGCGATGGCGGTGGTTGCAGCGGCCGCGGTGGTAGCAGCGGGATCGA TGGCGACGGCGGAGGCGGGAACGGCGGCGGTTTCGGCGGCGGTTTCGACC CGCGGCGGGCAGCGGCCGACGTCGTCCGTGGCTCTCCCGTTAGCGGATCC GACACGGTCAGTTTCCAGGTGGTAGATGCGGCAGGCGGTGCCGTCAGCTT CGTCAACAGTAACTACATGGGATTCGGGACGGGAATCGTGCCGGAAGGGT GTGGCTTCGCGCTGCAAAACCGCGGCGAAAACTTCTCGCTTGACCCGGTG CACCCCAACACGCTGGCGCCGGGCAAGCGGCCATACCACACCATCATCCC CGGCATGGCGACGCACGCAGAGACGGGCGAATTCTGGGCGTCTTTTACCA ACATGGGCGGCTTCATGCAGCCGCAGGTGAGGCTAAGACAGAAACCAGAA GGATTTTTATGGTGTGAGAGAGTTTCGCTGGAAGCGGAGTGTGTTTAGCG TTCCGTTGCCCTTTGGAACCTGTAATTGTGTCCCCCTTTTTTAGGTCATA CTGCGGTTCCAGAGCGGGCATTCTGGTGGCCGCACCACATCGGCATGTTC GTCAGCTGATGTGCGTCTCTCCTCGAACCGCTGCGCCGGCCCCTCTAAAT CGTTTCCCGTTCTGTTTGCGCCTCTAAATCGCTTCCCTTTCTGTATGCGC CGCCGTGTTCCATCTTTTAACCTTGAGGCTTCTGTCTTTCGTATCCTCGC CCTCCGCTTGAGGACAGCGGCTTCACAGCCTTTCAGCATTCCATCGTCTT TCCTCACCAGTTTTAGCTCTTGCTGCCTTCATTTTCTCTGTTCCAACCGT GGTTTTAATCTCTTGTCACAGTGCTTTCCCCTTCATTCCCCGCCTGGCCT CACGATTTACTGACTTCTATTGCCCAGTTCTCATCTTCCCTCCTTTTCCC TTCTCTGGTCGCTTGCACAGGGCCACGTTCAGCTGCTCTCCGCGCTGCTC GACCGCGGCGCTGACGCCCAGGCGGCGGTGGACGCGCCGCGCTTCTGCAT TTTGGACGGACGTGCCAACGGCGGCCGTGTCGCGCTCGAAGATGGCATTC CCCCTGCCGTTACGTCGGCGCTGCGGCGGATGGGCCACGACGTCGTGACG GTGGAGGGGGAGGAACGGTCGTACGTCTTTGGCCGCGCGCAGGTGAGAAA GAGTTTGCATCGGGCGGGCGGATGGCGGTTCTGGCGTGGGCGAAAGGTAT TTGTTTGTGGATGTTTTGGGTGAGGCCGGCGATTGTAGGCACCTGAGCTA AGGACTCACGATTGACGAAGGCGGGCCGAGAAAGGCGATTGAGCCAGACG GGGATGTTTTGGCGCCTGGCAAAATGTCTGTTCGACAATTGTTGCTGTCT TCTCCGTCTTTCAGTGTGCCGGATCGTTCTCAACTGCCTCATCTCTTTCC GGTTCGCTTTCCCTTTTTTTACCCGATGCTTGGCGCCGCTGCTGGCCGCT GGGACCGCCCCATTATTTCCGCAGGTAATTGTAAAGGATGAGGCGGGCGT CCTGTGGTGCGGGAGTGACGGCCGTGGCGACGGCTGCGGCATCGCGTGGT AG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11492:223..2124+

>mRNA_P-wetherbeei_contig11492.1.1 ID=mRNA_P-wetherbeei_contig11492.1.1|Name=mRNA_P-wetherbeei_contig11492.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=843bp|location=Sequence derived from alignment at P-wetherbeei_contig11492:223..2124+ (Phaeothamnion wetherbeei SAG_119_79)
GCTGCTGCGAACGCCGGAAGCGACGCATGCCCGTGCGTTGGCGGTGGCGA
GACGGTCGCCCAGATGACCGCCCGCCTCCACGCGCAGATCGAGGCGCTGC
GGTTCGCCTTTGTGGACGCCGCCTGGTTCTGCGCCGACCCCGCTGCGGTC
GTGGTCCCGGTGGACGAACTGTTGAGCGACGGGTACGCCCAGCGGCGGGC
GGCGGGGTGGACAGCGGCGGACACCGACACGGCCGACGTCGTCCGTGGCT
CTCCCGTTAGCGGATCCGACACGGTCAGTTTCCAGGTGGTAGATGCGGCA
GGCGGTGCCGTCAGCTTCGTCAACAGTAACTACATGGGATTCGGGACGGG
AATCGTGCCGGAAGGGTGTGGCTTCGCGCTGCAAAACCGCGGCGAAAACT
TCTCGCTTGACCCGGTGCACCCCAACACGCTGGCGCCGGGCAAGCGGCCA
TACCACACCATCATCCCCGGCATGGCGACGCACGCAGAGACGGGCGAATT
CTGGGCGTCTTTTACCAACATGGGCGGCTTCATGCAGCCGCAGGGCCACG
TTCAGCTGCTCTCCGCGCTGCTCGACCGCGGCGCTGACGCCCAGGCGGCG
GTGGACGCGCCGCGCTTCTGCATTTTGGACGGACGTGCCAACGGCGGCCG
TGTCGCGCTCGAAGATGGCATTCCCCCTGCCGTTACGTCGGCGCTGCGGC
GGATGGGCCACGACGTCGTGACGGTGGAGGGGGAGGAACGGTCGTACGTC
TTTGGCCGCGCGCAGGTAATTGTAAAGGATGAGGCGGGCGTCCTGTGGTG
CGGGAGTGACGGCCGTGGCGACGGCTGCGGCATCGCGTGGTAG
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