mRNA_P-wetherbeei_contig11467.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A6H5K1S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S1_9PHAE) HSP 1 Score: 137 bits (344), Expect = 9.610e-35 Identity = 74/181 (40.88%), Postives = 111/181 (61.33%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALA 543 RR+L+Y RD++RQ+++A++V L+ RL W V++M+H + RHPC LV+ L VDVL+TPHGFQSM+ LF++PG++LFE++P KY+K GY +A VR+ ++MS + LR + Y STE CM +Y CR +ARS +V + + +ER+V LA Sbjct: 257 RRLLLYQRDQNRQILHADKVVEDLQERLGG--------------------------GWIVNMMMHDSDRHPCVLVETLAGVDVLLTPHGFQSMLGLFMRPGSLLFEVFPQKYFKAGYAPMAEGLDVRHAYSMS--RALRPMMGHSYPSTETCMKWYLCRWYARSSDVELDEESLERLVDLA 409
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: D7FGW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW3_ECTSI) HSP 1 Score: 129 bits (325), Expect = 8.760e-32 Identity = 69/180 (38.33%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVAL 540 R+++IY RDR R+L+ EE+ +L +RL L W V ++H + RHPCELVQ L D+L+T HGFQSM+ LF+ PG++LFE+YP+KYYK GY +A + G+RY ++ S P L + S E+CM +Y CR + RS +V +++ +E +++L Sbjct: 301 RKLVIYQRDRDRKLLKTEELMDELWIRLGHLG-------------------------WAVKEIIHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPP--LLPFAFWSWPSVEQCMKWYVCRRYMRSSDVVITEDSIEVLISL 453
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A6H5JCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF3_9PHAE) HSP 1 Score: 129 bits (325), Expect = 3.400e-31 Identity = 69/180 (38.33%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVAL 540 R+++IY RDR+R+L+ EE+ +L +RL L W V+ ++H + RHPCELVQ L D+L+T HGFQSM+ LF+ PG++LFE+YP+KYYK GY +A + G+RY ++ S P L + S E+CM +Y CR + RS +V ++ +E +++L Sbjct: 462 RKLVIYQRDRNRKLLKTEELMDELWIRLGHLG-------------------------WAVEEIVHDDERHPCELVQELAGADILLTAHGFQSMLSLFMAPGSLLFEVYPHKYYKKGYAPMAQSMGLRYAYSESPP--LLPFAFWSWPSVEQCMKWYLCRRYMRSSDVVITADSIEVLISL 614
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: D7FHW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW9_ECTSI) HSP 1 Score: 123 bits (309), Expect = 6.350e-29 Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 172 WEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALAGVSARR 561 WEV ++H NA PC L +L + D+L+TPHGFQSM++LFL PGA + E++PYKY+K GY LA GVR+E MS P + +L L ++ ERCM CR ++RS +VR+ + + ++ A +++R Sbjct: 546 WEVVQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKRLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKR 675
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A6H5L8P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8P6_9PHAE) HSP 1 Score: 123 bits (309), Expect = 6.950e-29 Identity = 57/130 (43.85%), Postives = 85/130 (65.38%), Query Frame = 1 Query: 172 WEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALAGVSARR 561 WEV ++H NA PC L +L + D+L+TPHGFQSM++LFL PGA + E++PYKY+K GY LA GVR+E MS P + +L L ++ ERCM CR ++RS +VR+ + + ++ A +++R Sbjct: 619 WEVVQIVHDNAHEPCWLYSQLMDADMLLTPHGFQSMLLLFLPPGATILEVFPYKYWKEGYAPLAKEWGVRHEHIMSRPVSWEKRLALFFVPLERCMKSIHCRKWSRSADVRLEEHHLRQIAKAAKQASKR 748
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A6H5JWT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT6_9PHAE) HSP 1 Score: 121 bits (304), Expect = 1.570e-28 Identity = 70/181 (38.67%), Postives = 107/181 (59.12%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALA 543 RR+L+Y RD+ R++ NA +V LR RL W V+ M+H R PCELV+ + VDVL+TPHGFQSM+ LFL+PGA+LFE++P+KY+ Y A+ GVR+ ++MS ++ R + + +TE CM + CR+++R+ +V + + D+ER+V LA Sbjct: 367 RRLLLYQRDQCRRIKNAAQVMEDLRERLGG--------------------------DWLVEEMIHDADRQPCELVKTVGGVDVLLTPHGFQSMLGLFLRPGALLFEVFPHKYFWGQYAAMVEGLGVRHAWSMS--RSGRFFMRFAHPTTETCMRYKRCRAYSRNTDVEIEEQDLERLVKLA 519
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A7S3GPP9_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPP9_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.950e-28 Identity = 61/179 (34.08%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 4 RVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVAL 540 ++++Y RD SR+L N EE A LR +L + W++++++H +R PC L+ L+ D+L+TPHGFQSM++LFL ++FE++P KYYK GY GV + MS +L+L Y+S+ CM FCR FAR+ +V ++ V ++A Sbjct: 91 KMVLYQRDLSRKLANQEEAVAMLRSKL-------------------------SESDWDIEILMHKTSRSPCTLMHHLYNTDILLTPHGFQSMLLLFLPRPGLMFEIFPEKYYKRGYGPFGAEYGVTHGGTMSPSTGYYQQLVLPYVSSAYCMESKFCRGFARNQDVILTKHGVNNLLAF 244
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A7S0GN44_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GN44_MICPS) HSP 1 Score: 117 bits (293), Expect = 4.000e-28 Identity = 67/186 (36.02%), Postives = 96/186 (51.61%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALAGVSAR 558 R ++IY R+ R + + +VA +L L L W V V+ HS++ PC L L LVTPHGFQSM+ LFL A + E++P++YYK GYK A GV Y F+MS P++L +L+ +T+ CM Y+CR AR +V ++DAD + A V+AR Sbjct: 34 RHLVIYQRNTGRVMEDVRDVATRLEDTLNTLDDDAGLDVGASNDGSHDGSIRPVRFVWRVSVVTHSDSFPPCALRSCLARASALVTPHGFQSMLYLFLPQNAHVHEVFPHRYYKHGYKRAALEWGVSYGFSMSPPRSLLSRLISRLFTTDACMRMYYCRFLARKGDVLVTDADAALIARSAVVAAR 219
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: A0A7S0KFF8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KFF8_MICPS) HSP 1 Score: 111 bits (278), Expect = 3.570e-27 Identity = 70/190 (36.84%), Postives = 96/190 (50.53%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALAGVSARRASG 570 R V++Y RD R+L AEE A L LP GT A W V+ H PC L + L DVLVTPHGFQSM+ + L+PGA+++E++P++YYK GYK A G+ + ++S P+ L+ +T CMS Y+CR AR +V + DVE + S R A G Sbjct: 9 RHVVVYQRDAGRRLEGAEEAANALVEALPG-------------------GTGA----WRHSVVTHRENLPPCLLKRCLGNADVLVTPHGFQSMLYVLLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGASLSPPRGALPTLISRAFTTRGCMSMYYCRYLARKGDVVLEARDVEAIARAVRASDRDARG 175
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Match: C1DZC0_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DZC0_MICCC) HSP 1 Score: 115 bits (289), Expect = 2.630e-26 Identity = 71/190 (37.37%), Postives = 97/190 (51.05%), Query Frame = 1 Query: 1 RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASXXXXXXXXXXXXXXXAGTVAAAVRWEVDVMLHSNARHPCELVQRLHEVDVLVTPHGFQSMMILFLQPGAVLFELYPYKYYKLGYKALAPATGVRYEFAMSEPQTLRHKLLLHYISTERCMSFYFCRSFARSDNVRMSDADVERVVALAGVSARRASG 570 R V++Y RD R+L AEE A L LP GT A W V+ H PC L + L DVLVTPHGFQSM+ + L+PGA+++E++P++YYK GYK A G+ + ++S P+ L+ +T CMS Y+CR FAR +V + DVE + S R A G Sbjct: 335 RHVVVYQRDAGRRLEGAEEAANALVRALPG-------------------GTGA----WRHSVVTHHENLPPCLLKRCLGNADVLVTPHGFQSMLYILLKPGAMMYEVFPHRYYKHGYKRAALEWGLAHGMSLSPPRGALPTLISRAFTTGGCMSMYYCRYFARKGDVALEARDVEAIARAVRASDRDAQG 501 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11467.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11467.2.1 >prot_P-wetherbeei_contig11467.2.1 ID=prot_P-wetherbeei_contig11467.2.1|Name=mRNA_P-wetherbeei_contig11467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp RRVLIYNRDRSRQLINAEEVAAQLRLRLPALASLAAAGAAGVAGTANAAGback to top mRNA from alignment at P-wetherbeei_contig11467:299..1320+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11467.2.1 ID=mRNA_P-wetherbeei_contig11467.2.1|Name=mRNA_P-wetherbeei_contig11467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1022bp|location=Sequence derived from alignment at P-wetherbeei_contig11467:299..1320+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11467:299..1320+ >mRNA_P-wetherbeei_contig11467.2.1 ID=mRNA_P-wetherbeei_contig11467.2.1|Name=mRNA_P-wetherbeei_contig11467.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig11467:299..1320+ (Phaeothamnion wetherbeei SAG_119_79)back to top |