mRNA_P-wetherbeei_contig11466.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A6G0R266_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R266_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.070e-46 Identity = 104/285 (36.49%), Postives = 151/285 (52.98%), Query Frame = 1 Query: 1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKGLYPPPWTRDVKKTIKEHLLNAPESAAPLKFED-VTSDHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRF 852 VR IR + A +R++Y + +FL ++ +P L F + ++ IK+H+ S APL F+ V +D + K + L+ + R+ + NL+++Y ++ +E+ L F+G+ A S +G V+ GKD L Y FL D + + K+ F HA++VI WNLMCR+ + I +H+E RGDA+ IYFA KNDQ GDRP DPRHIYANP QP ICP LALGLY + G+ LFPG +QY+RF Sbjct: 13 VREIRDNTIIARSRATYQNSYCRFLAWIVRNKPHLTPPPFPESTTEYTMQQLRACIKQHVTQD-RSIAPLSFDAFVAADFVTWLVTLKRKDDGSLSYSALNTHRAGLFNLFRDY--GHTMSKSLESELT----NYFKGLKNKIAKSAANGESAVKTGKDPLMFDLY-----SFLCDKMMAHSSKEMAFAHAYMVIAWNLMCRSSNAFGIRHSHMEWRGDALQIYFAHMKNDQGGDRPCDPRHIYANPLQPSICPILALGLYWASSNFDGSD--LLFPGSNQYERF 283
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A225VQR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQR4_9STRA) HSP 1 Score: 158 bits (400), Expect = 2.780e-43 Identity = 94/261 (36.02%), Postives = 140/261 (53.64%), Query Frame = 1 Query: 1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKG--LYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALG 774 V R ++A++R+SY G++V+FL+++ + L+T+ F LY D K +IK L +AP + P+ F+ +T+ D + K C + +T G RS+ NLY++Y R + L F+G+ R A ++ GH ++ GKD + Y+ +A L +D +F F+++ WNLM A + VSIC H+ R DA+ YFA KNDQ G RPRDPRH+YANP PEICP LALG Sbjct: 15 VTNARTSTISANSRASYLGSAVRFLQWMLQNKRALVTDHFANSLLYDEHGVAD-KNSIKCALSSAPANP-PIDFDRITARDFLTWIFSMKKRNCDFHSFSTYAGHRSAFLNLYQDYH------RVMSAGLVREMSSHFKGLQRQVAGAICQGHGQIEVGKDPMSFGLYKQVALAMLQST-----SRDMIFARTFMILSWNLMSSAANTVSICYGHLAWRDDALCAYFAYMKNDQRGTRPRDPRHVYANPISPEICPILALG 262
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A2P4YAP4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAP4_9STRA) HSP 1 Score: 160 bits (404), Expect = 9.750e-43 Identity = 84/200 (42.00%), Postives = 123/200 (61.50%), Query Frame = 1 Query: 301 GRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR--KAGEASAE 894 G RS+ NL+++YR+ + + ++E ++ F+G+ R A ++ G +++ GKD +PIS + +A L + +D VF F+++ WNLM RA + VSIC H+E R DA+ +YFA KNDQ G RPRDPRH+YANP PEICP LALG+Y Y V +++ LFPG D+Y+RF L R K + +AE Sbjct: 16 GHRSAFHNLFQDYRK--VMSVELEREISCH----FKGLQRKVAAAISQGRGQIKIGKDPMPISLLKQVAMAML-----QSSSRDMVFARTFMIMSWNLMARAANTVSICYKHLEWREDALCVYFAHMKNDQRGTRPRDPRHVYANPMAPEICPILALGVYWAVYAVD-DEDVHLFPGNDEYERFRKVLGRVLKGPQVAAE 203
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A225V226_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V226_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.460e-42 Identity = 96/259 (37.07%), Postives = 134/259 (51.74%), Query Frame = 1 Query: 100 ELLTEAFKGLYPPPWTRDVKKT-IKEHLLNAPESAAPLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870 EL+ E F VK T IK+ L AP + P+ F +T+ D + K + + A G RS+ NL+++Y + L F+G N ++V G +++ GKD + I Y+ +A L N +D +F F+++ WNLM RA + SIC H+E R DA+ +YFA KND+ G RPRDPRH+YANP PEICP LALG+Y Y+V + LFPG DQY+RF L R Sbjct: 7 ELVQEGFANCVEYNANGTVKTTSIKQALSTAPMNP-PINFAQITARDFMTWIVSMKKPNGNYHSFAAYAGHRSAFFNLFQDYHCV------MSAELVRELSSHFKGFQHNVTSAVSQGRGQIKVGKDPMTIGLYKRVALSML-----ENSSRDMIFARLFMIMSWNLMSRAANTTSICYGHLEWRDDALCVYFAHMKNDRRGSRPRDPRHVYANPLSPEICPILALGVYWATYEVDASAT-HLFPGNDQYERFRKVLGR 252
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: V9EJY8_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9EJY8_PHYPR) HSP 1 Score: 153 bits (386), Expect = 5.180e-41 Identity = 98/295 (33.22%), Postives = 155/295 (52.54%), Query Frame = 1 Query: 10 IRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDVTSDHIPGEKGG------KAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLY-ALAYKVGGNKNGKLFPGKDQYQRFSSFL 864 I+ V+A +R+ Y + +F+ ++ + L+ AF G + ++K +K LL+ +S PL+F+ + + G KA+G H A R+ + NLY++Y ++ + F+G+ R A++ G V+ GKD L YR+L + L + KD +F +++I WNLMCR+ + SI H+E GDA+ +YFA QKNDQ G+RPRDPRHIYANP +PE+CP LA+ + A + +G ++ LFPG +QY+RF L Sbjct: 16 IKSNTVSAGSRAVYQNSYGRFIAWVFLNKTHLVVPAFAEKLGSISGLSLQQIRKRLKP-LLDRDQSNPPLQFDAIEMNVF----GAWLLTLQKADGSNHSFSAINT-HRAGLFNLYRDY------GHEMSPVMEKEMRQYFKGLKREMASAAARGEARVKTGKDPLSFELYRYLCERLLQCS-----SKDMMFARTYIIIAWNLMCRSANAFSIRYIHIEWSGDALCVYFAHQKNDQEGNRPRDPRHIYANPLKPELCPVLAIATFWATSSFIGDDR---LFPGSNQYERFCKCL 290
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A2D4CBA4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBA4_PYTIN) HSP 1 Score: 157 bits (398), Expect = 9.130e-41 Identity = 88/230 (38.26%), Postives = 125/230 (54.35%), Query Frame = 1 Query: 178 LLNAPESAAPLKFEDVTSDHIP-GEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFL 864 +++ + + L + +H P G + G + G +T R+++ NLY+EYRQ + +++ + FRG+ R G V+ GKD L Y EFL ++Q + KD F H FLV+ WNLMCR+ + VSI +H+ GD + +YFA KNDQ G+RPRDPRH+YANP QP ICP LALG+Y + V + +LFPG QY RF L Sbjct: 126 VMHVGRTVSGLPQNTTSREHFPPGTRNGGSPGF-----STFNNHRAALFNLYREYRQ--VMGAELQADMTT----CFRGLKRTVTERTSRGELPVKVGKDPLSFELY-----EFLAASLQKSESKDATFAHTFLVVTWNLMCRSANTVSIGSSHMSWEGDGLCVYFAHMKNDQTGERPRDPRHVYANPMQPAICPILALGVYWAVFAVD---SARLFPGAAQYDRFRKQL 336
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: W2QUJ4_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QUJ4_PHYPN) HSP 1 Score: 158 bits (400), Expect = 9.950e-41 Identity = 92/239 (38.49%), Postives = 133/239 (55.65%), Query Frame = 1 Query: 157 KKTIKEHLLNAPESAAPLKFEDVTSDH-IPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870 K +I L +AP++ PL F V + H + K + + + +T G RS++ NL+++Y + + T L F+G+ A+++ G ++ GKD + YR +A E + ++ VF AFLV+ WNLM R+ + VS+C H+E DA+ ++FA KNDQ G RPRDPRHIYANP PE+CP LALGLY + Y V N N ++FPG DQY RF L R Sbjct: 31 KDSILAALSSAPDNP-PLDFRAVQAQHFLSWILSMKNKDGGYHSFSTYAGHRSALYNLFRDYHYT------MSTQLERELSCHFKGLQHRIASAIGSGDGPIKVGKDPMTFGLYRSVAMEMMRST-----SREMVFARAFLVLSWNLMSRSANTVSLCYNHMEWGEDALKVFFAHMKNDQRGTRPRDPRHIYANPLMPEVCPILALGLYWMVYGVDSNAN-QVFPGNDQYDRFRKTLRR 256
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: W2ZY76_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZY76_PHYPR) HSP 1 Score: 157 bits (398), Expect = 6.170e-40 Identity = 109/306 (35.62%), Postives = 166/306 (54.25%), Query Frame = 1 Query: 1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAA-PLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSRKAGEASAEFAA 903 +RGIR ++A +R++Y + +FL ++ + EL++ F G ++ +KE L P+S+ PL+FE +T+ D + + L+ + R+S+ NLY++Y ++ +E+ L F+G+ A +G ++ GKD L Y L K+ L+ P KD F HA++VI WNLMCR+ + I +H++ RGDA+ IYFA KNDQ G+RPRDPRHIYANP +P ICP +ALGLY A V + + LFPG +QY+RF L R + + AA Sbjct: 13 IRGIRENTISARSRTTYQNSHCRFLAWVVQNKSELVSAQFAERLGDTSDCSLHQLRSRVKEKLC--PQSSIIPLEFEALTAEDFVTWLVTLTRKDGSGLSYSALNTHRASLFNLYRDY--GCTMSKVLESELTTY----FKGLKHTLAKEASNGTGRIKTGKDPLMFDLYIFLCKKMLL---LPG--KDMAFSHAYMVIAWNLMCRSSNAFGIRHSHMKWRGDALQIYFAHMKNDQGGERPRDPRHIYANPLEPSICPIVALGLY-WAITVFDDSD-LLFPGSNQYERFRKPLLRLLTQEEEDVAA 303
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A081A8D9_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A081A8D9_PHYPR) HSP 1 Score: 153 bits (386), Expect = 4.550e-39 Identity = 105/295 (35.59%), Postives = 160/295 (54.24%), Query Frame = 1 Query: 1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAA-PLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870 +RGIR ++A +R++Y + +FL ++ + EL++ F G ++ +KE L P+S+ PL+FE +T+ D + + L+ + R+S+ NLY++Y ++ +E+ L F+G+ A +G ++ GKD L Y L K+ L+ P KD F HA++VI WNLMCR+ + I +H+E RGDA+ IYFA NDQ G+RPRD RHIYANP +P ICP +ALGLY A V +++ LF G +QY+RF L R Sbjct: 13 IRGIRENTISARSRTTYQNSHCRFLAWVVQNKSELVSAPFAERLGDTSDCSLHQLRSRVKEKLC--PQSSIIPLEFETLTAEDFVTWLVTLTRKDGSGLSYSALNAHRASLFNLYRDY--GCTMSKALESELTTY----FKGLRHTLAKEASNGTGRIKTGKDPLMFDLYIFLCKKMLL---LPG--KDMAFSHAYMVIAWNLMCRSSNAFGIRHSHMEWRGDALQIYFAHMNNDQGGERPRDTRHIYANPLEPSICPIVALGLY-WATTVFDDRH-LLFHGSNQYERFRKSLLR 292
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A0W8CIM1_PHYNI (Uncharacterized protein n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CIM1_PHYNI) HSP 1 Score: 146 bits (369), Expect = 1.350e-38 Identity = 89/258 (34.50%), Postives = 139/258 (53.88%), Query Frame = 1 Query: 13 RMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK-GLYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDV-TSDHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLY 780 R +A +R+SY ++V+ L ++ +P L+ F+ L K +I L +APE+ PL F DV +D + K + + + +T G RS+ NL+++Y + ++E L+ F+G+ A ++ G ++ GKD + YR +A+E + + +D VF FL++ WNLM RA + VS+C +H+E DA+ ++FA KNDQ G RPRDPRHIYANP P ICP LA+G Y Sbjct: 20 RASTIATKSRASYLNSTVRMLTWMLRHKPLLVPRPFRDALRFENGAEATKTSILTALSSAPENP-PLLFNDVKAADFLAWILSMKNKSGGYHSFSTYAGHRSAFYNLFRDYHCT--MTSQLERELSCH----FKGLQHRIAGAISSGDGSIKVGKDPMTFGLYRRIAEEMM-----KSSSRDMVFARTFLLVSWNLMARAANTVSLCYSHMEWGEDALRVFFAHMKNDQRGTRPRDPRHIYANPLMPAICPILAIGTY 265 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11466.3.1 >prot_P-wetherbeei_contig11466.3.1 ID=prot_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp MQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKGLYPPPWTRDVKKTback to top mRNA from alignment at P-wetherbeei_contig11466:582..2002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11466.3.1 ID=mRNA_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1421bp|location=Sequence derived from alignment at P-wetherbeei_contig11466:582..2002+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11466:582..2002+ >mRNA_P-wetherbeei_contig11466.3.1 ID=mRNA_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig11466:582..2002+ (Phaeothamnion wetherbeei SAG_119_79)back to top |