mRNA_P-wetherbeei_contig11466.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11466.3.1
Unique NamemRNA_P-wetherbeei_contig11466.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A6G0R266_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0R266_9STRA)

HSP 1 Score: 168 bits (425), Expect = 1.070e-46
Identity = 104/285 (36.49%), Postives = 151/285 (52.98%), Query Frame = 1
Query:    1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKGLYPPPWTRDVKKTIKEHLLNAPESAAPLKFED-VTSDHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRF 852
            VR IR   + A +R++Y  +  +FL ++   +P L    F         + ++  IK+H+     S APL F+  V +D +      K +    L+ +     R+ + NL+++Y      ++ +E+ L       F+G+    A S  +G   V+ GKD L    Y      FL D +  +  K+  F HA++VI WNLMCR+ +   I  +H+E RGDA+ IYFA  KNDQ GDRP DPRHIYANP QP ICP LALGLY  +    G+    LFPG +QY+RF
Sbjct:   13 VREIRDNTIIARSRATYQNSYCRFLAWIVRNKPHLTPPPFPESTTEYTMQQLRACIKQHVTQD-RSIAPLSFDAFVAADFVTWLVTLKRKDDGSLSYSALNTHRAGLFNLFRDY--GHTMSKSLESELT----NYFKGLKNKIAKSAANGESAVKTGKDPLMFDLY-----SFLCDKMMAHSSKEMAFAHAYMVIAWNLMCRSSNAFGIRHSHMEWRGDALQIYFAHMKNDQGGDRPCDPRHIYANPLQPSICPILALGLYWASSNFDGSD--LLFPGSNQYERF 283          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A225VQR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQR4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.780e-43
Identity = 94/261 (36.02%), Postives = 140/261 (53.64%), Query Frame = 1
Query:    1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKG--LYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALG 774
            V   R   ++A++R+SY G++V+FL+++   +  L+T+ F    LY      D K +IK  L +AP +  P+ F+ +T+ D +      K   C   + +T  G RS+  NLY++Y       R +   L       F+G+ R  A ++  GH ++  GKD +    Y+ +A   L         +D +F   F+++ WNLM  A + VSIC  H+  R DA+  YFA  KNDQ G RPRDPRH+YANP  PEICP LALG
Sbjct:   15 VTNARTSTISANSRASYLGSAVRFLQWMLQNKRALVTDHFANSLLYDEHGVAD-KNSIKCALSSAPANP-PIDFDRITARDFLTWIFSMKKRNCDFHSFSTYAGHRSAFLNLYQDYH------RVMSAGLVREMSSHFKGLQRQVAGAICQGHGQIEVGKDPMSFGLYKQVALAMLQST-----SRDMIFARTFMILSWNLMSSAANTVSICYGHLAWRDDALCAYFAYMKNDQRGTRPRDPRHVYANPISPEICPILALG 262          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A2P4YAP4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YAP4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 9.750e-43
Identity = 84/200 (42.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:  301 GRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR--KAGEASAE 894
            G RS+  NL+++YR+  + + ++E  ++      F+G+ R  A ++  G  +++ GKD +PIS  + +A   L      +  +D VF   F+++ WNLM RA + VSIC  H+E R DA+ +YFA  KNDQ G RPRDPRH+YANP  PEICP LALG+Y   Y V  +++  LFPG D+Y+RF   L R  K  + +AE
Sbjct:   16 GHRSAFHNLFQDYRK--VMSVELEREISCH----FKGLQRKVAAAISQGRGQIKIGKDPMPISLLKQVAMAML-----QSSSRDMVFARTFMIMSWNLMARAANTVSICYKHLEWREDALCVYFAHMKNDQRGTRPRDPRHVYANPMAPEICPILALGVYWAVYAVD-DEDVHLFPGNDEYERFRKVLGRVLKGPQVAAE 203          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A225V226_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225V226_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.460e-42
Identity = 96/259 (37.07%), Postives = 134/259 (51.74%), Query Frame = 1
Query:  100 ELLTEAFKGLYPPPWTRDVKKT-IKEHLLNAPESAAPLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870
            EL+ E F           VK T IK+ L  AP +  P+ F  +T+ D +      K     + + A   G RS+  NL+++Y         +   L       F+G   N  ++V  G  +++ GKD + I  Y+ +A   L      N  +D +F   F+++ WNLM RA +  SIC  H+E R DA+ +YFA  KND+ G RPRDPRH+YANP  PEICP LALG+Y   Y+V  +    LFPG DQY+RF   L R
Sbjct:    7 ELVQEGFANCVEYNANGTVKTTSIKQALSTAPMNP-PINFAQITARDFMTWIVSMKKPNGNYHSFAAYAGHRSAFFNLFQDYHCV------MSAELVRELSSHFKGFQHNVTSAVSQGRGQIKVGKDPMTIGLYKRVALSML-----ENSSRDMIFARLFMIMSWNLMSRAANTTSICYGHLEWRDDALCVYFAHMKNDRRGSRPRDPRHVYANPLSPEICPILALGVYWATYEVDASAT-HLFPGNDQYERFRKVLGR 252          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: V9EJY8_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P1569 TaxID=1317065 RepID=V9EJY8_PHYPR)

HSP 1 Score: 153 bits (386), Expect = 5.180e-41
Identity = 98/295 (33.22%), Postives = 155/295 (52.54%), Query Frame = 1
Query:   10 IRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDVTSDHIPGEKGG------KAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLY-ALAYKVGGNKNGKLFPGKDQYQRFSSFL 864
            I+   V+A +R+ Y  +  +F+ ++   +  L+  AF    G       + ++K +K  LL+  +S  PL+F+ +  +      G       KA+G  H   A     R+ + NLY++Y        ++   +       F+G+ R  A++   G   V+ GKD L    YR+L +  L  +      KD +F   +++I WNLMCR+ +  SI   H+E  GDA+ +YFA QKNDQ G+RPRDPRHIYANP +PE+CP LA+  + A +  +G ++   LFPG +QY+RF   L
Sbjct:   16 IKSNTVSAGSRAVYQNSYGRFIAWVFLNKTHLVVPAFAEKLGSISGLSLQQIRKRLKP-LLDRDQSNPPLQFDAIEMNVF----GAWLLTLQKADGSNHSFSAINT-HRAGLFNLYRDY------GHEMSPVMEKEMRQYFKGLKREMASAAARGEARVKTGKDPLSFELYRYLCERLLQCS-----SKDMMFARTYIIIAWNLMCRSANAFSIRYIHIEWSGDALCVYFAHQKNDQEGNRPRDPRHIYANPLKPELCPVLAIATFWATSSFIGDDR---LFPGSNQYERFCKCL 290          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A2D4CBA4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBA4_PYTIN)

HSP 1 Score: 157 bits (398), Expect = 9.130e-41
Identity = 88/230 (38.26%), Postives = 125/230 (54.35%), Query Frame = 1
Query:  178 LLNAPESAAPLKFEDVTSDHIP-GEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFL 864
            +++   + + L     + +H P G + G + G      +T    R+++ NLY+EYRQ  +   +++  +       FRG+ R        G   V+ GKD L    Y     EFL  ++Q +  KD  F H FLV+ WNLMCR+ + VSI  +H+   GD + +YFA  KNDQ G+RPRDPRH+YANP QP ICP LALG+Y   + V    + +LFPG  QY RF   L
Sbjct:  126 VMHVGRTVSGLPQNTTSREHFPPGTRNGGSPGF-----STFNNHRAALFNLYREYRQ--VMGAELQADMTT----CFRGLKRTVTERTSRGELPVKVGKDPLSFELY-----EFLAASLQKSESKDATFAHTFLVVTWNLMCRSANTVSIGSSHMSWEGDGLCVYFAHMKNDQTGERPRDPRHVYANPMQPAICPILALGVYWAVFAVD---SARLFPGAAQYDRFRKQL 336          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: W2QUJ4_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora parasitica TaxID=4792 RepID=W2QUJ4_PHYPN)

HSP 1 Score: 158 bits (400), Expect = 9.950e-41
Identity = 92/239 (38.49%), Postives = 133/239 (55.65%), Query Frame = 1
Query:  157 KKTIKEHLLNAPESAAPLKFEDVTSDH-IPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870
            K +I   L +AP++  PL F  V + H +      K +   + + +T  G RS++ NL+++Y  +      + T L       F+G+    A+++  G   ++ GKD +    YR +A E +         ++ VF  AFLV+ WNLM R+ + VS+C  H+E   DA+ ++FA  KNDQ G RPRDPRHIYANP  PE+CP LALGLY + Y V  N N ++FPG DQY RF   L R
Sbjct:   31 KDSILAALSSAPDNP-PLDFRAVQAQHFLSWILSMKNKDGGYHSFSTYAGHRSALYNLFRDYHYT------MSTQLERELSCHFKGLQHRIASAIGSGDGPIKVGKDPMTFGLYRSVAMEMMRST-----SREMVFARAFLVLSWNLMSRSANTVSLCYNHMEWGEDALKVFFAHMKNDQRGTRPRDPRHIYANPLMPEVCPILALGLYWMVYGVDSNAN-QVFPGNDQYDRFRKTLRR 256          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: W2ZY76_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica P10297 TaxID=1317064 RepID=W2ZY76_PHYPR)

HSP 1 Score: 157 bits (398), Expect = 6.170e-40
Identity = 109/306 (35.62%), Postives = 166/306 (54.25%), Query Frame = 1
Query:    1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAA-PLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSRKAGEASAEFAA 903
            +RGIR   ++A +R++Y  +  +FL ++   + EL++  F    G         ++  +KE L   P+S+  PL+FE +T+ D +        +    L+ +     R+S+ NLY++Y      ++ +E+ L       F+G+    A    +G   ++ GKD L    Y  L K+ L+    P   KD  F HA++VI WNLMCR+ +   I  +H++ RGDA+ IYFA  KNDQ G+RPRDPRHIYANP +P ICP +ALGLY  A  V  + +  LFPG +QY+RF   L R   +   + AA
Sbjct:   13 IRGIRENTISARSRTTYQNSHCRFLAWVVQNKSELVSAQFAERLGDTSDCSLHQLRSRVKEKLC--PQSSIIPLEFEALTAEDFVTWLVTLTRKDGSGLSYSALNTHRASLFNLYRDY--GCTMSKVLESELTTY----FKGLKHTLAKEASNGTGRIKTGKDPLMFDLYIFLCKKMLL---LPG--KDMAFSHAYMVIAWNLMCRSSNAFGIRHSHMKWRGDALQIYFAHMKNDQGGERPRDPRHIYANPLEPSICPIVALGLY-WAITVFDDSD-LLFPGSNQYERFRKPLLRLLTQEEEDVAA 303          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A081A8D9_PHYPR (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A081A8D9_PHYPR)

HSP 1 Score: 153 bits (386), Expect = 4.550e-39
Identity = 105/295 (35.59%), Postives = 160/295 (54.24%), Query Frame = 1
Query:    1 VRGIRMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK---GLYPPPWTRDVKKTIKEHLLNAPESAA-PLKFEDVTS-DHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSR 870
            +RGIR   ++A +R++Y  +  +FL ++   + EL++  F    G         ++  +KE L   P+S+  PL+FE +T+ D +        +    L+ +     R+S+ NLY++Y      ++ +E+ L       F+G+    A    +G   ++ GKD L    Y  L K+ L+    P   KD  F HA++VI WNLMCR+ +   I  +H+E RGDA+ IYFA   NDQ G+RPRD RHIYANP +P ICP +ALGLY  A  V  +++  LF G +QY+RF   L R
Sbjct:   13 IRGIRENTISARSRTTYQNSHCRFLAWVVQNKSELVSAPFAERLGDTSDCSLHQLRSRVKEKLC--PQSSIIPLEFETLTAEDFVTWLVTLTRKDGSGLSYSALNAHRASLFNLYRDY--GCTMSKALESELTTY----FKGLRHTLAKEASNGTGRIKTGKDPLMFDLYIFLCKKMLL---LPG--KDMAFSHAYMVIAWNLMCRSSNAFGIRHSHMEWRGDALQIYFAHMNNDQGGERPRDTRHIYANPLEPSICPIVALGLY-WATTVFDDRH-LLFHGSNQYERFRKSLLR 292          
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Match: A0A0W8CIM1_PHYNI (Uncharacterized protein n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CIM1_PHYNI)

HSP 1 Score: 146 bits (369), Expect = 1.350e-38
Identity = 89/258 (34.50%), Postives = 139/258 (53.88%), Query Frame = 1
Query:   13 RMQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFK-GLYPPPWTRDVKKTIKEHLLNAPESAAPLKFEDV-TSDHIPGEKGGKAEGCRHLTKATAKGRRSSISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVREGKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSVVSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFLALGLY 780
            R   +A  +R+SY  ++V+ L ++   +P L+   F+  L         K +I   L +APE+  PL F DV  +D +      K +   + + +T  G RS+  NL+++Y  +     ++E  L+      F+G+    A ++  G   ++ GKD +    YR +A+E +      +  +D VF   FL++ WNLM RA + VS+C +H+E   DA+ ++FA  KNDQ G RPRDPRHIYANP  P ICP LA+G Y
Sbjct:   20 RASTIATKSRASYLNSTVRMLTWMLRHKPLLVPRPFRDALRFENGAEATKTSILTALSSAPENP-PLLFNDVKAADFLAWILSMKNKSGGYHSFSTYAGHRSAFYNLFRDYHCT--MTSQLERELSCH----FKGLQHRIAGAISSGDGSIKVGKDPMTFGLYRRIAEEMM-----KSSSRDMVFARTFLLVSWNLMARAANTVSLCYSHMEWGEDALRVFFAHMKNDQRGTRPRDPRHIYANPLMPAICPILAIGTY 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11466.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0R266_9STRA1.070e-4636.49Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A225VQR4_9STRA2.780e-4336.02Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A2P4YAP4_9STRA9.750e-4342.00Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A225V226_9STRA1.460e-4237.07Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
V9EJY8_PHYPR5.180e-4133.22Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A2D4CBA4_PYTIN9.130e-4138.26Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
W2QUJ4_PHYPN9.950e-4138.49Uncharacterized protein n=3 Tax=Phytophthora paras... [more]
W2ZY76_PHYPR6.170e-4035.62Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A081A8D9_PHYPR4.550e-3935.59Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
A0A0W8CIM1_PHYNI1.350e-3834.50Uncharacterized protein n=2 Tax=Phytophthora nicot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11466contigP-wetherbeei_contig11466:582..2002 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4792.ETI37830
PFAMsNuf2
Model size906
Max annot lvl4776|Peronosporales
KEGG koko:K11548
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.17e-39
EggNOG OGsKOG4438@1|root,KOG4438@2759|Eukaryota,3Q997@4776|Peronosporales
DescriptionNuf2 family
Cds size891
COG categoryD
BRITEko00000,ko03036
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185912.6552718-UTR-P-wetherbeei_contig11466:581..5961683185912.6552718-UTR-P-wetherbeei_contig11466:581..596Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11466 582..596 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185912.6660683-CDS-P-wetherbeei_contig11466:596..8601683185912.6660683-CDS-P-wetherbeei_contig11466:596..860Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11466 597..860 +
1683185912.675067-CDS-P-wetherbeei_contig11466:970..12021683185912.675067-CDS-P-wetherbeei_contig11466:970..1202Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11466 971..1202 +
1683185912.683809-CDS-P-wetherbeei_contig11466:1316..14981683185912.683809-CDS-P-wetherbeei_contig11466:1316..1498Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11466 1317..1498 +
1683185912.694267-CDS-P-wetherbeei_contig11466:1789..20021683185912.694267-CDS-P-wetherbeei_contig11466:1789..2002Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11466 1790..2002 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11466.3.1prot_P-wetherbeei_contig11466.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11466 597..2002 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11466.3.1

>prot_P-wetherbeei_contig11466.3.1 ID=prot_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=297bp
MQRVAASTRSSYAGNSVQFLKYLQGTRPELLTEAFKGLYPPPWTRDVKKT
IKEHLLNAPESAAPLKFEDVTSDHIPGEKGGKAEGCRHLTKATAKGRRSS
ISNLYKEYRQSDIYARKIETALAMSGEGAFRGVLRNCANSVRDGHEEVRE
GKDLLPISGYRHLAKEFLVDAVQPNGHKDGVFGHAFLVIMWNLMCRAVSV
VSICLAHVEMRGDAIAIYFAQQKNDQLGDRPRDPRHIYANPFQPEICPFL
ALGLYALAYKVGGNKNGKLFPGKDQYQRFSSFLSRKAGEASAEFAAY
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mRNA from alignment at P-wetherbeei_contig11466:582..2002+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11466.3.1 ID=mRNA_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1421bp|location=Sequence derived from alignment at P-wetherbeei_contig11466:582..2002+ (Phaeothamnion wetherbeei SAG_119_79)
GTTCGGGGGATACGGATGCAACGCGTCGCGGCATCCACGAGGTCGTCCTA CGCGGGGAATTCGGTACAGTTCCTGAAGTACCTGCAGGGGACGAGACCAG AGCTCCTCACTGAAGCCTTTAAGGGCCTGTACCCCCCGCCATGGACGAGG GACGTTAAGAAGACAATCAAAGAGCACCTGTTGAACGCCCCGGAGAGCGC CGCACCCCTGAAGTTTGAAGATGTGACAAGCGATCATATCCCGGGTGAGA AGGGGGGAAAAGCCGAGGGGTGCCGCCATGTCTCTTGTTGGATTCTTTTG TTGGACGCCGCGCCACGCAAAATTTGACAACCTGTTGTCGCTCCACGCTC ACCACAGAGTATTTTACGCATCTTGCCAACACAAAGAAGCTCACCAAGGC GACGGCAAAGGGCCGGCGGTCGTCCATCAGCAATCTGTACAAGGAGTACA GGCAGAGCGACATCTACGCCAGGAAAATCGAAACTGCTCTGGCGATGTCT GGAGAGGGGGCCTTCCGTGGCGTGCTGCGCAATTGCGCAAACAGCGTGCG GGACGGGCACGAGGAAGTGCGCGAGGGCAAGGACCTACTGCCAATCAGCG GCTACCGCCACCTGGCAAAAGGTTAGTGGGTTCTTCCTATTTGGCCTGCC CTTGCATGTGCCTTGCAAGCATGGCGTGCCGAAAATTCAGTTACCTTTTG CCTCGTCGCTCCCTCCTCTCGTGTGGCTGGTGCAGAATTTCTGGTCGACG CTGTGCAACCGAACGGCCACAAGGACGGCGTGTTTGGGCATGCTTTCCTT GTCATCATGTGGAACCTGATGTGTAGGGCTGTGAGTGTGGTGTCTATCTG CCTCGCGCACGTTGAGATGAGGGGCGACGCAATTGCCATTTACTTCGCCC AACAAAAGAACGACCAGGTAAGATGTTACAGCAGAAGGCTTTGGATGCTT GACTTTCTCTGAAGCATGTTTACGTTGCACTTTAAGAAACGGCTTTCATC TTGCTTAAAAGAAAAGAAATACCAGTTTTCTCCTTCCAATTTACAACGTT GACATTTTTCAGTCAGGAAAACAATCTGTACTGCAGCTGTGGCATGACAA ACTAGTTTATGGTCGCCCTGCTACACATATTATCGAAGGAGAAGATGCCT TTTTACCATCATGCGTTCGTCATTTCTCCGGCCTCGCCTCGTGCCTTTTG CCCGTCAGCTGGGGGACCGGCCTAGGGATCCACGCCACATCTACGCCAAC CCGTTCCAGCCCGAGATCTGCCCATTTTTGGCCCTGGGTTTGTACGCTCT CGCTTATAAAGTGGGAGGAAACAAGAACGGGAAGCTGTTCCCGGGGAAAG ACCAGTACCAGCGATTCAGCTCCTTTTTGAGTCGCAAGGCAGGTGAGGCG AGCGCTGAATTTGCGGCTTAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11466:582..2002+

>mRNA_P-wetherbeei_contig11466.3.1 ID=mRNA_P-wetherbeei_contig11466.3.1|Name=mRNA_P-wetherbeei_contig11466.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=891bp|location=Sequence derived from alignment at P-wetherbeei_contig11466:582..2002+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAACGCGTCGCGGCATCCACGAGGTCGTCCTACGCGGGGAATTCGGT
ACAGTTCCTGAAGTACCTGCAGGGGACGAGACCAGAGCTCCTCACTGAAG
CCTTTAAGGGCCTGTACCCCCCGCCATGGACGAGGGACGTTAAGAAGACA
ATCAAAGAGCACCTGTTGAACGCCCCGGAGAGCGCCGCACCCCTGAAGTT
TGAAGATGTGACAAGCGATCATATCCCGGGTGAGAAGGGGGGAAAAGCCG
AGGGGTGCCGCCATCTCACCAAGGCGACGGCAAAGGGCCGGCGGTCGTCC
ATCAGCAATCTGTACAAGGAGTACAGGCAGAGCGACATCTACGCCAGGAA
AATCGAAACTGCTCTGGCGATGTCTGGAGAGGGGGCCTTCCGTGGCGTGC
TGCGCAATTGCGCAAACAGCGTGCGGGACGGGCACGAGGAAGTGCGCGAG
GGCAAGGACCTACTGCCAATCAGCGGCTACCGCCACCTGGCAAAAGAATT
TCTGGTCGACGCTGTGCAACCGAACGGCCACAAGGACGGCGTGTTTGGGC
ATGCTTTCCTTGTCATCATGTGGAACCTGATGTGTAGGGCTGTGAGTGTG
GTGTCTATCTGCCTCGCGCACGTTGAGATGAGGGGCGACGCAATTGCCAT
TTACTTCGCCCAACAAAAGAACGACCAGCTGGGGGACCGGCCTAGGGATC
CACGCCACATCTACGCCAACCCGTTCCAGCCCGAGATCTGCCCATTTTTG
GCCCTGGGTTTGTACGCTCTCGCTTATAAAGTGGGAGGAAACAAGAACGG
GAAGCTGTTCCCGGGGAAAGACCAGTACCAGCGATTCAGCTCCTTTTTGA
GTCGCAAGGCAGGTGAGGCGAGCGCTGAATTTGCGGCTTAC
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