mRNA_P-wetherbeei_contig11435.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11435.1.1
Unique NamemRNA_P-wetherbeei_contig11435.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A836CJP1_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP1_9STRA)

HSP 1 Score: 424 bits (1091), Expect = 1.750e-141
Identity = 212/317 (66.88%), Postives = 257/317 (81.07%), Query Frame = 1
Query:   13 RGKRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            R + QTLLFSATMP WVQ+VAK+YM AD+ Y+DLVG+ + KASQDV+HVAVP  W +R  TI D+ISVY  GGS  RT+VFC+TKK CNEL++ EGI FECQPLHGDI+Q+NRESTL+GF+KGSF+VLVATDVAARGLDM VDLVINAEPP+TASGRVDTE YVHRSGRTGRAGRKG C+TLYTP+ RGAL E+E+   N F WRG+PQP D+IAASAEAA E++A +   V+P + +AA  LI ERGA  ALC ALA ITGH     ARS+LSNS GFVT+ +TS   + Y + VW+ALR++L P+VT+ ++GMQ+
Sbjct:  324 RREVQTLLFSATMPEWVQRVAKDYMKADRMYIDLVGNSAVKASQDVQHVAVPCQWQTRASTINDLISVYAAGGS-KRTLVFCSTKKQCNELIVDEGISFECQPLHGDITQANRESTLSGFRKGSFKVLVATDVAARGLDMTVDLVINAEPPSTASGRVDTEAYVHRSGRTGRAGRKGVCITLYTPRSRGALAEIERHIKNAFVWRGSPQPDDIIAASAEAAVEDMADIDDNVLPRFASAARALIAERGAEEALCAALAMITGHTKALAARSLLSNSTGFVTLLYTSAVDIGYPSDVWAALRRKLDPDVTESIRGMQI 639          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: D7G2L3_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2L3_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 1.980e-136
Identity = 205/327 (62.69%), Postives = 251/327 (76.76%), Query Frame = 1
Query:    1 GTGGRGKRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQVRRKEDG 981
            G  G   RQ LLFSATMP WV +V KEYM  D+ ++DLV + + KAS+DV H+ +P HW SR  TI D++SVYG GG+  RTIVFCTTK+DCNEL M   + ++CQ LHGDI+Q+NRESTLAGFKKGSF+VLVATDVAARGLDMIVDLV+NAEPPT  SGRVDTE+YVHRSGRTGRAGRKG C+TLYTP+ RG L E+E+  GN F WRGAPQP D++ ASA AA ++I AV   V+ LY+ AA +LI+E+GAL ALC ALAC+TG       RS+LSNSEG VT+ F S  P++Y+AY W+A+RK L+    D ++GMQ+   EDG
Sbjct:  323 GEEGEQGRQMLLFSATMPPWVDKVVKEYMKEDRVFIDLVKEGTVKASKDVEHIGIPCHWTSRSSTINDIVSVYGAGGN-KRTIVFCTTKRDCNELCMDPKMTYDCQALHGDITQANRESTLAGFKKGSFKVLVATDVAARGLDMIVDLVLNAEPPTHQSGRVDTESYVHRSGRTGRAGRKGMCITLYTPRQRGGLGEIERHIGNDFAWRGAPQPDDIVNASAGAAIDDIRAVDDSVIDLYKTAAEQLIDEKGALNALCAALACMTGRTEAMPVRSLLSNSEGHVTIIFRSDHPIEYMAYCWTAIRKVLSSAAADNIRGMQL--SEDG 646          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: K8YSG2_NANGC (RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSG2_NANGC)

HSP 1 Score: 376 bits (965), Expect = 5.710e-122
Identity = 192/316 (60.76%), Postives = 239/316 (75.63%), Query Frame = 1
Query:   19 KRQTLLFSATMPAWVQQVAKEYMSADK-EYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            +RQ LLFSAT+P WVQ+VA++YM  DK   VDLV    AKAS DVRHVA+P HW+S   T+ D ++VYGG   A RTIVFC TKK+CNELV+   I  EC  LHGDI Q+ RE+TL  F++G  RVLVATDVAARGLDM VDLV+  +PP TASGR D ETYVHRSGRTGRAGRKG CVTL++PK+R A+KE+E   GN FEW GAPQPAD++AASA AA E++A V  +V PL++AAA++L+EE GA  AL  ALAC+TGH    ++RS+LSNS+ +VT +F + QP+    YVW+ALR  L  EVT+ ++GMQ+
Sbjct:  322 RRQVLLFSATLPPWVQKVAQQYMRKDKLVQVDLVQGEDAKASTDVRHVAIPCHWSSMPSTVADCLAVYGGSNKA-RTIVFCETKKECNELVVNPVIKTECAALHGDIPQAQRETTLKAFREGRVRVLVATDVAARGLDMTVDLVVQNKPPVTASGRTDVETYVHRSGRTGRAGRKGICVTLFSPKYRFAVKEIEGAVGNKFEWAGAPQPADIVAASALAAMEDVANVDDKVFPLFQAAAAKLVEEMGAEEALAAALACLTGHTKELRSRSLLSNSDDYVTCQFQADQPIMSTGYVWTALRNALPQEVTEDIRGMQL 636          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A7R9U1A7_9STRA (RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U1A7_9STRA)

HSP 1 Score: 347 bits (891), Expect = 8.000e-111
Identity = 181/324 (55.86%), Postives = 231/324 (71.30%), Query Frame = 1
Query:    1 GTGGRGKRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALA-ALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQ--QPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            G G    RQTLLFSAT+PAWV +V K+++  D   +DLVGD + KAS DV H+AVP HW +R +TIGD+IS++ G     RTIVFC  KKDCNEL+M EGI +ECQ LHGDI+QS RE+TLAGF++G FRVLVATDVAARGLDM+VDLVI  EPP   SG  D ETYVHRSGRTGRAGRKG CVTLYTPK R AL+ +EK+ GN+F W+GAPQPAD++A++A      ++AV   V+P +  AA    E+ G +  AL   LA   GH    Q RS+L+N++G++T +F++   + V  + YVW ALR+ L  E  + V+G+ V
Sbjct:  337 GDGRDWPRQTLLFSATLPAWVGEVKKQFLREDCLSIDLVGDSTIKASTDVSHIAVPCHWQTRSKTIGDIISLHAG--QKGRTIVFCERKKDCNELIMDEGISYECQALHGDIAQSQRETTLAGFREGRFRVLVATDVAARGLDMVVDLVIMIEPPIKKSGYPDVETYVHRSGRTGRAGRKGVCVTLYTPKQRQALQMIEKKIGNLFVWQGAPQPADILASAATQTLNSLSAVDEAVIPSFMKAAEEATEQFGDVKRALAATLALAAGHLKMPQPRSLLTNTDGYITCQFSAGPGRTVQGLGYVWGALRRCLPEECCNNVRGISV 658          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A7S2BM10_9STRA (RNA helicase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BM10_9STRA)

HSP 1 Score: 329 bits (843), Expect = 1.480e-104
Identity = 166/320 (51.88%), Postives = 223/320 (69.69%), Query Frame = 1
Query:   13 RGKRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERG--ALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQVR 966
            R  RQT LFSATMP WV   A +YM  D   +D+VG+ + +AS DVRH+A+P+HW +R  T+ D I++Y G  +  + ++FC TK DCN+L M   + +E + LHGD+ Q+ RE T+  F+ G FRV+V TDVAARGLDMIVDLVI  +PP + SG+V+ ETYVHRSGRTGRAGRKG CVT+Y+PK R  ++ +EK+TGN FEW GAPQP  ++  +AE A  +  A+PAEV   +  AA RL+E  G  AL A+  ALA  TGH      RS+LSN++GFVT+ F S + ++  +Y+WSALR+ L  ++  G+KGMQVR
Sbjct:  255 REGRQTCLFSATMPGWVHTAATKYMR-DPVTIDMVGNSAVQASTDVRHIAIPAHWQTRAATMSDTIAMYAG--TTGQILIFCETKVDCNDLTMDATLKYEAKALHGDVPQATREKTIEAFRNGRFRVMVCTDVAARGLDMIVDLVIQNKPPESRSGKVEVETYVHRSGRTGRAGRKGICVTMYSPKQRTNIQTIEKKTGNSFEWLGAPQPRAIMLTAAETAVSDATAIPAEVRDHFTDAAQRLVEACGGNALTAVAAALALSTGHTELPPLRSLLSNADGFVTLEFRSPRSLENHSYIWSALRRELPEKMVGGIKGMQVR 571          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A8J5XMT2_DIALT (RNA helicase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XMT2_DIALT)

HSP 1 Score: 317 bits (811), Expect = 1.830e-99
Identity = 165/321 (51.40%), Postives = 225/321 (70.09%), Query Frame = 1
Query:   19 KRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTA-SGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEER--GALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDG---VKGMQV 963
            +RQT LFSATMPAWV+ VA +YM  + + VDLVGD + KAS+DVRHVA+PSHW++R  TI DVIS+Y G   ++R IVFC TK +C++L+ ++ + ++ + LHGDI Q+ RE T+A F+ G  RVL+ATDVAARGLD+ +DLV+  +PP    SG+ + ETYVHRSGRTGRAG+KG CVTL+ P+ R  L+++EKQT N FEW  AP P  ++  ++E AA + AAV A V  L+  AA  L++ +   A+AA+  ALA  TG     Q RS+LSNS+G+VT+  +  + V   +YVW ALR+ L    TDG   V+GMQ+
Sbjct:  268 ERQTCLFSATMPAWVRDVAPKYMRPNPKVVDLVGDVAVKASEDVRHVAIPSHWSTRASTINDVISMYAG--PSARAIVFCETKAECDDLITSDALKYDAKALHGDIPQATREKTMAAFRSGKVRVLIATDVAARGLDVKIDLVVQNKPPIKKMSGKPEVETYVHRSGRTGRAGKKGVCVTLFGPRDRPILQQIEKQTKNTFEWLAAPNPKSLLKTASETAATDAAAVDASVAALFARAAQSLLDAKHGDAVAAISAALAVATGTSEAPQTRSLLSNSDGYVTLHASMGKDVPNTSYVWGALRRVLPEGTTDGTDNVRGMQL 586          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A7S0J4R8_9EUKA (RNA helicase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J4R8_9EUKA)

HSP 1 Score: 315 bits (808), Expect = 1.160e-98
Identity = 171/321 (53.27%), Postives = 226/321 (70.40%), Query Frame = 1
Query:   22 RQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGR--TIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERG--ALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRL---APEVTDGVKGMQV 963
            RQT LFSAT+P+WV+QVA  YM+++ + +DLVGD   KAS  VRH+A+P+    + R  +I DVI++YGG   + R IVFC+TK +C+EL  AE + FE +PLHGDI Q+ RE T+A F+ G FRVLVATDVAARGLDMIVDLV+  +PP   SG VDTETYVHRSGRTGRAGRKG CVTL+ P+ R +L+E+E+   N FEW  AP P  ++  +A+ AA++ AAV  EV+P +  AA  L++ R   A+AAL  ALA  TG  AP   RS+L+  EG++T++ T +Q V   +YVW ALR+ L   A E TD V+ M++
Sbjct:  325 RQTCLFSATLPSWVRQVAPGYMTSEPKLIDLVGDSDVKASSQVRHLAIPAPGPVKERVSSINDVIAMYGG--QSGRVIVFCSTKAECDELSTAETLRFEAKPLHGDIPQAMREKTIAAFRNGRFRVLVATDVAARGLDMIVDLVMQNKPPVRKSGTVDTETYVHRSGRTGRAGRKGVCVTLFGPRERHSLEEIERYAKNQFEWLQAPSPRSLLFTAADTAAQDAAAVCDEVMPFFTKAAQALLDSRDGDAIAALSSALALATGTSAPPAERSLLTQLEGYITLQATMRQQVGGPSYVWGALRRVLPSGACEGTDNVRSMKL 643          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A1V9YZB2_9STRA (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZB2_9STRA)

HSP 1 Score: 310 bits (794), Expect = 2.330e-97
Identity = 158/313 (50.48%), Postives = 211/313 (67.41%), Query Frame = 1
Query:   25 QTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            QTLLFSAT+P+W+ QVAK+YM  D+ Y+++V D   +AS+DV+H+A+P HW +R   + ++IS Y      SRTI+F  TKKDCNEL +   I  + Q LHGDI+Q+ RE T+  F++G  R+L+ATDVAARGLDM VDLVIN+EPP   SGR D +TYVHRSGRTGRAG+KG C+TL+TP+ +  L  +E+   N F    AP   D+ A++A AAA EI AV AE+V L+   A+ LI+  GA  AL  ALACITGH  P    S+LS S  FVT+ F +  P+    YVW+A+ + +    T  +K MQ+
Sbjct:  263 QTLLFSATIPSWLDQVAKKYMKPDRVYINMVNDNEDQASKDVQHIAIPCHWQTRTTLLANLISKYAT--KTSRTIIFAETKKDCNELAVDPSIKQDAQVLHGDIAQNQREITMKAFREGKVRLLIATDVAARGLDMDVDLVINSEPPRKQSGRADVDTYVHRSGRTGRAGKKGICITLFTPRQKDNLMIIERAIKNKFTMMAAPNVDDITASAATAAAAEIEAVDAEMVELFTETAASLIDSMGAEKALAAALACITGHTKPPAQASLLSGSPDFVTVMFAASNPIRAKGYVWNAIHRDIPESFTKDIKNMQL 573          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A6G0WSX1_9STRA (RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSX1_9STRA)

HSP 1 Score: 307 bits (787), Expect = 5.710e-96
Identity = 157/313 (50.16%), Postives = 211/313 (67.41%), Query Frame = 1
Query:   25 QTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            QTLLFSAT+PAWV+ VAKEYMSA +EYV+LV D  A+AS DV H+A+P HW +R + + +++S+Y     +SRTI+F  TKKDCNEL +   I  + Q LHGDI+Q  RE+T+  F++G  R+L+ATDVAARGLDM VDLVIN+EPP   SGR D ETYVHRSGRTGRAG+KG C+TL+TPK +  L  +E+     F  + AP   D+I  SA  A+ E+  V  +++ L+   A  LIE+ GA  AL  ALACITG+  P    S+LS +   +T+ F S  P+    YVW+A+ + +  +   G+K MQ+
Sbjct:  288 QTLLFSATIPAWVESVAKEYMSASREYVNLVKDNEAQASTDVEHIAIPCHWQTRPQLLANLLSMYTT--KSSRTIIFAETKKDCNELAVNPDIKQDAQVLHGDIAQGQRETTMQAFREGKLRLLIATDVAARGLDMDVDLVINSEPPRKQSGRADVETYVHRSGRTGRAGKKGICITLFTPKQKDNLILIERHIKKKFTMKSAPNVDDMITQSAATASAELETVHEDMLGLFLPTAEALIEKHGAATALASALACITGYTRPVAQASLLSGAPDMITVMFESSNPIRAKGYVWNAVNRDIPEQYAAGIKNMQL 598          
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Match: A0A1W0A9D4_9STRA (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9D4_9STRA)

HSP 1 Score: 304 bits (778), Expect = 4.400e-95
Identity = 153/313 (48.88%), Postives = 207/313 (66.13%), Query Frame = 1
Query:   25 QTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDVRHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEGIPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVINAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEKQTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEERGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYVWSALRKRLAPEVTDGVKGMQV 963
            QTLLFSAT+P W+ QVAK+YM  D+E+V++V D   +AS+DV+H+A+P HW +R   + +++S+Y      SRTI+F  TKKDCNEL +   I  + Q LHGDI+Q+ RE T+  F++G  R+L+ATDVAARGLDM VDLVIN+EPP   +GR D +TYVHRSGRTGRAG+KG C+TL+TPK +  L  +E+   N F  + AP   D+I  +A  AA EI AV  E++ L+ + A  LIE  GA  AL  ALAC TGH  P    S+L+ S    T+ F S   +    YVW+A+ + +  E T  +K MQ+
Sbjct:  248 QTLLFSATIPTWLDQVAKQYMKPDREFVNMVNDNEDQASKDVQHIAIPCHWQTRASLLANLLSMYAT--KTSRTIIFAETKKDCNELAVNPDIKLDAQVLHGDIAQNQREITMQAFREGKLRLLIATDVAARGLDMDVDLVINSEPPRKQTGRADVDTYVHRSGRTGRAGKKGVCITLFTPKQKDNLLHIERSIKNKFIMKSAPNVDDMITGAAATAASEIEAVNPEMIDLFMSTAKELIESMGAEKALAAALACATGHTQPPAQASLLTGSPDMTTIIFESTSAIRAKGYVWNAIHRDIPEEFTANIKNMQL 558          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11435.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJP1_9STRA1.750e-14166.88RNA helicase n=1 Tax=Tribonema minus TaxID=303371 ... [more]
D7G2L3_ECTSI1.980e-13662.69RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
K8YSG2_NANGC5.710e-12260.76RNA helicase n=3 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A7R9U1A7_9STRA8.000e-11155.86RNA helicase n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A7S2BM10_9STRA1.480e-10451.88RNA helicase n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A8J5XMT2_DIALT1.830e-9951.40RNA helicase n=2 Tax=Diacronema lutheri TaxID=2081... [more]
A0A7S0J4R8_9EUKA1.160e-9853.27RNA helicase (Fragment) n=1 Tax=Calcidiscus leptop... [more]
A0A1V9YZB2_9STRA2.330e-9750.48RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772... [more]
A0A6G0WSX1_9STRA5.710e-9650.16RNA helicase n=1 Tax=Aphanomyces euteiches TaxID=1... [more]
A0A1W0A9D4_9STRA4.400e-9548.88RNA helicase n=1 Tax=Thraustotheca clavata TaxID=7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11435contigP-wetherbeei_contig11435:1..2088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G2L3
Preferred nameDDX21
PFAMsDEAD,GUCT,Helicase_C
Model size981
Max annot lvl2759|Eukaryota
KEGG koko:K13183,ko:K16911
KEGG Pathwayko01110,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005886,GO:0006139,GO:0006351,GO:0006366,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009893,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010501,GO:0010604,GO:0010628,GO:0014070,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017069,GO:0017111,GO:0018130,GO:0019222,GO:0019438,GO:0019843,GO:0030515,GO:0031974,GO:0031981,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035198,GO:0040029,GO:0042221,GO:0042623,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043330,GO:0043331,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045815,GO:0046483,GO:0048518,GO:0050789,GO:0050896,GO:0051704,GO:0051707,GO:0060255,GO:0061980,GO:0065007,GO:0070013,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097322,GO:0097659,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698
Exons6
Evalue3.24e-137
EggNOG OGsCOG0513@1|root,KOG0331@2759|Eukaryota
EC3.6.4.13
Descriptionhelicase activity
Cds size981
COG categoryL
BRITEko00000,ko01000,ko03009,ko03036,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11435.1.1prot_P-wetherbeei_contig11435.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11435 1..2088 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185911.4047294-CDS-P-wetherbeei_contig11435:0..2311683185911.4047294-CDS-P-wetherbeei_contig11435:0..231Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 1..231 -
1683185911.4192588-CDS-P-wetherbeei_contig11435:547..7221683185911.4192588-CDS-P-wetherbeei_contig11435:547..722Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 548..722 -
1683185911.4313295-CDS-P-wetherbeei_contig11435:894..10131683185911.4313295-CDS-P-wetherbeei_contig11435:894..1013Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 895..1013 -
1683185911.4440873-CDS-P-wetherbeei_contig11435:1266..13551683185911.4440873-CDS-P-wetherbeei_contig11435:1266..1355Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 1267..1355 -
1683185911.454622-CDS-P-wetherbeei_contig11435:1538..16351683185911.454622-CDS-P-wetherbeei_contig11435:1538..1635Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 1539..1635 -
1683185911.4652972-CDS-P-wetherbeei_contig11435:1818..20881683185911.4652972-CDS-P-wetherbeei_contig11435:1818..2088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11435 1819..2088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11435.1.1

>prot_P-wetherbeei_contig11435.1.1 ID=prot_P-wetherbeei_contig11435.1.1|Name=mRNA_P-wetherbeei_contig11435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
GTGGRGKRQTLLFSATMPAWVQQVAKEYMSADKEYVDLVGDRSAKASQDV
RHVAVPSHWASRGRTIGDVISVYGGGGSASRTIVFCTTKKDCNELVMAEG
IPFECQPLHGDISQSNRESTLAGFKKGSFRVLVATDVAARGLDMIVDLVI
NAEPPTTASGRVDTETYVHRSGRTGRAGRKGCCVTLYTPKHRGALKEVEK
QTGNVFEWRGAPQPADVIAASAEAAAEEIAAVPAEVVPLYEAAASRLIEE
RGALAALCGALACITGHKAPKQARSMLSNSEGFVTMRFTSQQPVDYVAYV
WSALRKRLAPEVTDGVKGMQVRRKEDG
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mRNA from alignment at P-wetherbeei_contig11435:1..2088-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11435.1.1 ID=mRNA_P-wetherbeei_contig11435.1.1|Name=mRNA_P-wetherbeei_contig11435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2088bp|location=Sequence derived from alignment at P-wetherbeei_contig11435:1..2088- (Phaeothamnion wetherbeei SAG_119_79)
GGCACCGGCGGACGGGGCAAGCGGCAGACGCTGCTGTTCAGCGCGACGAT GCCGGCATGGGTGCAGCAGGTGGCGAAGGAATACATGTCGGCCGACAAAG AGTACGTCGACCTCGTGGGTGACCGATCCGCCAAGGCATCGCAGGACGTG CGGCACGTGGCGGTGCCGTCGCACTGGGCCAGCCGGGGCCGCACCATCGG CGACGTCATCTCCGTCTACGGCGGCGGCGGCAGCGCCTCGCGTACCATTG TCTTTTGCACCACGAAGAAGGTGCGGCACAAGCTTGCGGCGGGCGCCCTT TTTAAGTTCTGTGTTTTTGTAAGCCAGCTGTCGGCTGCAAACCCGCTTGC TGTTGGTTGCCGTTTTCTTATCATGCGTGCACTGTGGAGGAAAGCCCGTG TGATTCAGAATATTCTCAGTATTCTCTGACGCATCGTCCTCTACAACAAA CAGGATTGCAACGAGCTGGTGATGGCAGAGGGGATTCCCTTCGAGTGCCA ACCGCTGCACGGCGACATTAGCCAGAGCAACCGTGAATCAACGCTTGCTG GTGAGTGGTTTGATCTGAGTTTAACCCCACGTTGTAGCGTTTGTTGCTTT GTTGCTTTGTTGCTTTGGAGTGACGGACCTCCCTGCAGCTCTCCCCGCCG ACTTCTCCGTCCTGTGTCCTTCCTCCTCGTCCACCAACTTTTCTGTTTCT TCCCTCCCTTCGGGTCCGTTTCAAATTTTGCAGGCTTCAAGAAGGGTTCC TTCCGGGTGCTGGTGGCGACCGACGTGGCGGCTCGCGGCCTCGACATGAT TGTTGATCTCGTCATCAACGCGGTGCGAATTCGTTGTGTGTGCTTCACTA AATCGGGAAAATACGTCTTAGCATTATAGTTTCCACATGTCGATCGTTTG CAGGTGGCAGGGACATTTGTGCTGGGCGGCGAGCGATCGCAATACTGCTT TCCGAAGCTATTGATGATAATTTTCTTTGAGCTTCTACTACCGCTCTCCG AGTCACGGCCATATTAGTTCTTGCTTTGCTATTCGCTTGGTTTGGAAATA TACACGCGTCTCTAAACGCTCGCAGGAGCCGCCGACGACGGCATCGGGTC GCGTCGATACGGAGACATACGTGCACCGCTCGGGCCGCACAGGCCGTGCC GGCAGAAAAGGCTGCTGCGTCACTCTTTACACTCCCAAGCACAGGTGAAG GAAGGGTAGCAACGCGCTCAGTGAGCGCATACAGAGGCTACCTGAGCAGT GGCAAGCTTTGCGGAACTTCCTGTCGCAGGCTTTGTTTCTCAGGTCTCCT GACCCTGCTTTAATTATTGAAATCTCCCCGATTCCCTCTGTTTCACCGTT GTGATACATTACGCAGGGGGGCGCTAAAGGAGGTGGAGAAGCAGACCGGC AACGTCTTCGAGTGGCGCGGCGCGCCTCAGCCCGCCGATGTGATTGCCGC GTCGGCGGAGGCGGCGGCGGAGGAAATTGCGGCAGTGCCAGCCGAGGTGG TGCCGCTCTACGAGGCCGCCGCCTCACGGCTCATCGAAGAGGTCAGTAAG CCAGTCGGCCGGTCACCCAGGCGGTGGGGCGTCGGGTATAGGGTTAGCAG GTATAGCCGAGAATGACACTGCACGCATGTTCGCTCGACCTGGAACAACT TGTTTCCGCTTCGTGGGCGGCGACACGGGCTTGTTCTTGTCATCACGGCG GTGGCTGCTCCTGCTGCCGCTGTTGCTGTTGTTGTTGTTGCTGCTGCTAC TGCTTCCGCTGCCGCCGCCGCCGCTGCGGCTTTCTTTAATTTATCTCTGT CCTCCCCCTGTTCCATTTTAACGCATTTCTTCTGGGCGTTTGTCTATGTT ATATCAGCGTGGCGCCTTAGCGGCGCTCTGCGGGGCATTGGCCTGCATCA CGGGTCACAAGGCGCCAAAACAGGCGCGGTCGATGCTGTCAAACAGCGAG GGATTTGTGACGATGCGCTTCACGTCCCAGCAGCCAGTTGACTACGTCGC CTACGTCTGGAGCGCACTCAGGAAGCGGCTGGCGCCCGAGGTGACTGACG GTGTCAAGGGCATGCAGGTGCGTAGGAAAGAAGATGGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11435:1..2088-

>mRNA_P-wetherbeei_contig11435.1.1 ID=mRNA_P-wetherbeei_contig11435.1.1|Name=mRNA_P-wetherbeei_contig11435.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig11435:1..2088- (Phaeothamnion wetherbeei SAG_119_79)
GGCACCGGCGGACGGGGCAAGCGGCAGACGCTGCTGTTCAGCGCGACGAT
GCCGGCATGGGTGCAGCAGGTGGCGAAGGAATACATGTCGGCCGACAAAG
AGTACGTCGACCTCGTGGGTGACCGATCCGCCAAGGCATCGCAGGACGTG
CGGCACGTGGCGGTGCCGTCGCACTGGGCCAGCCGGGGCCGCACCATCGG
CGACGTCATCTCCGTCTACGGCGGCGGCGGCAGCGCCTCGCGTACCATTG
TCTTTTGCACCACGAAGAAGGATTGCAACGAGCTGGTGATGGCAGAGGGG
ATTCCCTTCGAGTGCCAACCGCTGCACGGCGACATTAGCCAGAGCAACCG
TGAATCAACGCTTGCTGGCTTCAAGAAGGGTTCCTTCCGGGTGCTGGTGG
CGACCGACGTGGCGGCTCGCGGCCTCGACATGATTGTTGATCTCGTCATC
AACGCGGAGCCGCCGACGACGGCATCGGGTCGCGTCGATACGGAGACATA
CGTGCACCGCTCGGGCCGCACAGGCCGTGCCGGCAGAAAAGGCTGCTGCG
TCACTCTTTACACTCCCAAGCACAGGGGGGCGCTAAAGGAGGTGGAGAAG
CAGACCGGCAACGTCTTCGAGTGGCGCGGCGCGCCTCAGCCCGCCGATGT
GATTGCCGCGTCGGCGGAGGCGGCGGCGGAGGAAATTGCGGCAGTGCCAG
CCGAGGTGGTGCCGCTCTACGAGGCCGCCGCCTCACGGCTCATCGAAGAG
CGTGGCGCCTTAGCGGCGCTCTGCGGGGCATTGGCCTGCATCACGGGTCA
CAAGGCGCCAAAACAGGCGCGGTCGATGCTGTCAAACAGCGAGGGATTTG
TGACGATGCGCTTCACGTCCCAGCAGCCAGTTGACTACGTCGCCTACGTC
TGGAGCGCACTCAGGAAGCGGCTGGCGCCCGAGGTGACTGACGGTGTCAA
GGGCATGCAGGTGCGTAGGAAAGAAGATGGA
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