mRNA_P-wetherbeei_contig11426.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A7S0KV63_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0KV63_MICPS) HSP 1 Score: 107 bits (268), Expect = 4.480e-26 Identity = 55/116 (47.41%), Postives = 73/116 (62.93%), Query Frame = 1 Query: 10 VTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFP-GKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHPE 354 + QP L + F ++H A Y V+NKP+ RL+ P G PG P +P + +V + R + D +RFCHQLD ATSG+LV A ++ AAG A LFR+R A KTY A+VFGHPE Sbjct: 51 IARQPQSLERDFHLVHEDADYAVVNKPWCVRLDTPRGWPGKVRFTPKYPGDLSVEDWLERRYPDWDTVRFCHQLDNATSGVLVAASNKRAAGAAAKLFRERRARKTYLAIVFGHPE 166
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A0G4FEV8_VITBC (PseudoU_synth_2 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FEV8_VITBC) HSP 1 Score: 94.4 bits (233), Expect = 1.350e-20 Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 10 VTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHP 351 + +QP L + +V+H Y+V++KP + R++ P + E TVA R C D +R CHQLD+ATSG+LV K++EA G+CA LF +R A K Y A+V+GHP Sbjct: 112 IANQPWCLERAIKVVHECEGYVVIDKPDNVRMDVPRTKSHK-----YDRELTVADWFKRRCPSSDKVRPCHQLDHATSGVLVMGKTKEATGRCAVLFSQRKARKQYLALVYGHP 220
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: K8EIZ1_9CHLO (Pseudouridine synthase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIZ1_9CHLO) HSP 1 Score: 91.7 bits (226), Expect = 1.900e-19 Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 1 KAFVTSQPGFLRQRFQVLHNSAQ--YIVLNKPFDTRLNFP-GKPGSADGGPAFPEERTVAGEV-ARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHPE 354 K FV QP L ++FQ++H + Y+ LNKPFD RL+ P G PG F + + + AR E +RFCHQLD ATSG+L+ A +++AAG A +FR+R +K Y+AVVFG PE Sbjct: 82 KEFVLRQPQCLERKFQIIHEDLKLGYVALNKPFDVRLDTPRGWPGKVRFTAKFDGDASCEDFLNARFPGEH--VRFCHQLDNATSGVLLCALTKKAAGVAAKMFRERRTKKFYSAVVFGWPE 201
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: C1MUR7_MICPC (Pseudouridine synthase n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1MUR7_MICPC) HSP 1 Score: 91.7 bits (226), Expect = 2.310e-19 Identity = 50/120 (41.67%), Postives = 68/120 (56.67%), Query Frame = 1 Query: 10 VTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPA------FPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHP 351 + QP L +RF ++H Y V+NKP+ RL+ P A G P +P + +V + D +RF HQLD ATSG+LV A ++ AAG+ A LFR+R A K Y A+VFGHP Sbjct: 167 IARQPHSLERRFHLVHECEDYAVVNKPWCVRLDTPRGWKDAAGNPLNRFTPKYPGDLSVEDWLEERYPGWDTVRFVHQLDNATSGVLVAASNKRAAGRAAKLFRERAARKAYIALVFGHP 286
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A8J5XAX4_DIALT (PseudoU_synth_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XAX4_DIALT) HSP 1 Score: 89.0 bits (219), Expect = 9.020e-19 Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 7 FVTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGH 348 FV QP FLR F V + A +++++KPFD RL+ G F E T A +A + +RFCHQLD ATSG+L+ AKS++AA LF +R A K Y A+VFGH Sbjct: 59 FVRRQPQFLRLEFGVPYEDASFVLISKPFDVRLDL-----GTSGERNFALEITAADFLA--ARGLGTLRFCHQLDAATSGLLLAAKSRKAASAACGLFERRQARKQYLALVFGH 165
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A7S3S8B8_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S8B8_EMIHU) HSP 1 Score: 86.3 bits (212), Expect = 6.370e-18 Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 4 AFVTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHP 351 A ++ QP L F +H Q ++++KPF R++ P +P AD + G + R CH LDYATSG++ AKS+ AA + LF R A K Y A+VFGHP Sbjct: 114 ALISEQPELLELDFGAVHEDEQLLLVHKPFQVRMSAPSRPAGADSPDEPSLHEWLVGTHPSVMTAAGTTRVCHNLDYATSGVVACAKSEGAAREVGRLFEARKARKLYAALVFGHP 229
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A7S3WAW1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3WAW1_EMIHU) HSP 1 Score: 86.3 bits (212), Expect = 1.220e-17 Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 4 AFVTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHP 351 A ++ QP L F +H Q ++++KPF R++ P +P AD + G + R CH LDYATSG++ AKS+ AA + LF R A K Y A+VFGHP Sbjct: 114 ALISEQPELLELDFGAVHEDEQLLLVHKPFQVRMSAPSRPAGADSPDEPSLHEWLVGTHPSVMTAAGTTRVCHNLDYATSGVVACAKSEGAAREVGRLFEARKARKLYAALVFGHP 229
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A7S0MYQ1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MYQ1_9CHLO) HSP 1 Score: 83.6 bits (205), Expect = 1.670e-16 Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 1 Query: 7 FVTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHP 351 ++T QP L QRF+ +++ +Y+ + KP+ TR + P G + + + + ++ + RFCHQ+D+AT G+L+ AK+Q AAG LF R+ +K Y A+VFGHP Sbjct: 145 YITRQPSCLEQRFEEIYSDERYVAIRKPYYTRHDTPRGWGRPRYEKRYEGDTSAEEWLQERYPDVHI-RFCHQIDFATEGVLLAAKTQAAAGAVGKLFSSRSNKKQYLAIVFGHP 258
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A0G4F5L5_9ALVE (PseudoU_synth_2 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F5L5_9ALVE) HSP 1 Score: 82.8 bits (203), Expect = 4.350e-16 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 10 VTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDVMRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGH 348 V +P +L ++FQ L + I +NKPFD R++ P K GS + E +VA C E + +R CHQLD+ATSG+L+ A++++AAG+ F +R A+K Y+A++ GH Sbjct: 284 VREEPLYLARKFQTLLKTKDLIAVNKPFDVRVDIP-KAGSHK----WSLEVSVADWFCDQCPECERVRLCHQLDHATSGVLILARNKKAAGQVQQTFEQRGAKKEYSALLRGH 391
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Match: A0A7S0KHX4_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0KHX4_9CHLO) HSP 1 Score: 78.6 bits (192), Expect = 1.380e-14 Identity = 52/135 (38.52%), Postives = 69/135 (51.11%), Query Frame = 1 Query: 4 AFVTSQPGFLRQRFQVLHNSAQ--YIVLNKPFDTRLNFPGKPGSADGGPAFPEERTVAGEVARLCAEMDV----------------MRFCHQLDYATSGILVTAKSQEAAGKCAALFRKRTAEKTYTAVVFGHPE 354 A QPG L ++++ + AQ +I ++KPF RL+ P G E+ T E R D RFCHQLD ATSG+++TA ++EAAG A LFR+R A+K Y AVVFG PE Sbjct: 430 ACALRQPGVLERKYETVFECAQRGFIAVHKPFAVRLDTP------RGWSEKTEDGTGRVEKVRFVPRWDGDASCEDWLNIRFPDMHHRFCHQLDTATSGVVLTANTREAAGSAAKLFRERRAKKRYLAVVFGWPE 558 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11426.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11426.1.1 >prot_P-wetherbeei_contig11426.1.1 ID=prot_P-wetherbeei_contig11426.1.1|Name=mRNA_P-wetherbeei_contig11426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp KAFVTSQPGFLRQRFQVLHNSAQYIVLNKPFDTRLNFPGKPGSADGGPAFback to top mRNA from alignment at P-wetherbeei_contig11426:1801..2154+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11426.1.1 ID=mRNA_P-wetherbeei_contig11426.1.1|Name=mRNA_P-wetherbeei_contig11426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig11426:1801..2154+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11426:1801..2154+ >mRNA_P-wetherbeei_contig11426.1.1 ID=mRNA_P-wetherbeei_contig11426.1.1|Name=mRNA_P-wetherbeei_contig11426.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig11426:1801..2154+ (Phaeothamnion wetherbeei SAG_119_79)back to top |