mRNA_P-wetherbeei_contig11425.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A835Z857_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z857_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.890e-52 Identity = 107/160 (66.88%), Postives = 117/160 (73.12%), Query Frame = 1 Query: 13 MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 M KR QLPA+QMAD I+ I +NQVVV+SGETGCGKT TQVPQLVLD LI G GA AN++VTQPRRISAIGVAERIA ERCER G AGYQIRLESKRS +TRLLLCTTG+LLRRLQIDP L+TVSHVFVDEV + Sbjct: 738 MQAKREQLPAYQMADGIVKAISQNQVVVISGETGCGKT------------------------TQVPQLVLDHLIATGVGACANMVVTQPRRISAIGVAERIAQERCERVGGMAGYQIRLESKRSNRTRLLLCTTGILLRRLQIDPWLSTVSHVFVDEVHE 873
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A6H5L0U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0U7_9PHAE) HSP 1 Score: 186 bits (471), Expect = 1.000e-51 Identity = 103/163 (63.19%), Postives = 119/163 (73.01%), Query Frame = 1 Query: 4 YAAMLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 Y ML KR++LPA++M D I+ + QVVVVSGETGCGKT TQVPQLVLD +I + GA ANI+VTQPRRISA+GVAERIAAER ER G+TAGYQIRLESKRS+ TRLLLCTTG+LLRRLQ+DP LA+VSHVFVDEV + Sbjct: 191 YQDMLAKRSKLPAYEMRDHIVRTVRNAQVVVVSGETGCGKT------------------------TQVPQLVLDTMIMEKEGASANIIVTQPRRISAVGVAERIAAERAERIGETAGYQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHE 329
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: D7G1J2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J2_ECTSI) HSP 1 Score: 186 bits (471), Expect = 2.180e-51 Identity = 103/163 (63.19%), Postives = 119/163 (73.01%), Query Frame = 1 Query: 4 YAAMLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 Y ML KR++LPA++M D I+ + QVVVVSGETGCGKT TQVPQLVLD +I + GA ANI+VTQPRRISA+GVAERIAAER ER G+TAGYQIRLESKRS+ TRLLLCTTG+LLRRLQ+DP LA+VSHVFVDEV + Sbjct: 261 YQDMLAKRSKLPAYEMRDHIVRTVRNAQVVVVSGETGCGKT------------------------TQVPQLVLDTMIMEKEGASANIIVTQPRRISAVGVAERIAAERAERIGETAGYQIRLESKRSKATRLLLCTTGILLRRLQVDPWLASVSHVFVDEVHE 399
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: B8C1N5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1N5_THAPS) HSP 1 Score: 180 bits (457), Expect = 6.750e-50 Identity = 98/160 (61.25%), Postives = 116/160 (72.50%), Query Frame = 1 Query: 13 MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 ML +R +LPA++M D ++ I NQV V+SG+TGCGKT TQVPQLVLD LI RG+ AN++VTQPRRISAIGV+ERIAAERCER G+T GY IRLES+RS +TRLLLCTTGVLLRRLQ+DP LA+VSHVFVDEV + Sbjct: 1 MLSQRIKLPAYKMKDKVLETIRANQVTVISGDTGCGKT------------------------TQVPQLVLDDLILSNRGSEANVIVTQPRRISAIGVSERIAAERCERIGETVGYSIRLESRRSAKTRLLLCTTGVLLRRLQVDPDLASVSHVFVDEVHE 136
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A7S3QBY0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QBY0_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.240e-49 Identity = 99/160 (61.88%), Postives = 116/160 (72.50%), Query Frame = 1 Query: 13 MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 ML +R +LPAFQM + I+ I NQ+ VVSG+TGCGKT TQVPQLVLD +I Q RG+ ANI+VTQPRRISAIGV+ERIA+ERCER G+T GY IRLE+KRS +TRLLLCTTG+LLRRLQ DP LA+VSHVFVDEV + Sbjct: 722 MLSQRQRLPAFQMEEKIVRTIGSNQISVVSGDTGCGKT------------------------TQVPQLVLDDMIRQNRGSEANIIVTQPRRISAIGVSERIASERCERVGETVGYSIRLENKRSAKTRLLLCTTGILLRRLQCDPDLASVSHVFVDEVHE 857
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A7S2YMV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMV8_9STRA) HSP 1 Score: 166 bits (420), Expect = 6.390e-46 Identity = 95/152 (62.50%), Postives = 103/152 (67.76%), Query Frame = 1 Query: 37 PAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 PAF M D+I I+ NQVVV+SG TG GKT TQVPQ VLD LI RGA ANILVTQPRRISAIGVAER+AAERCE+ GQT GY I+LE K S+ TRLLLCTTGVLLRRL DP LA +SHVFVDEV Q Sbjct: 1 PAFGMKDNISETIQNNQVVVISGATGSGKT------------------------TQVPQFVLDELISGNRGAHANILVTQPRRISAIGVAERMAAERCEKCGQTVGYSIKLEKKMSKHTRLLLCTTGVLLRRLMGDPDLAAISHVFVDEVHQ 128
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A7S1HKN7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HKN7_HEMAN) HSP 1 Score: 157 bits (397), Expect = 1.700e-44 Identity = 85/160 (53.12%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 13 MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 M + R +LPA+QMA +I+ I+ +QVVV+SG+TGCGKT TQ+PQLVLD+ + GRG ++ TQPRRISA+ VA+R+AAER E GQT GYQIRLE+KRS QT+LL CTTGVLLRRLQ D +L V+H+FVDE+ + Sbjct: 74 MQKVRQKLPAYQMAGEILHAIDNHQVVVISGDTGCGKT------------------------TQLPQLVLDQYVRNGRGGEVEMICTQPRRISAMSVADRVAAERAEATGQTVGYQIRLEAKRSAQTKLLFCTTGVLLRRLQGDCLLKGVTHIFVDEIHE 209
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A7S4JSU1_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JSU1_GUITH) HSP 1 Score: 157 bits (396), Expect = 2.860e-44 Identity = 85/160 (53.12%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 13 MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 M++ R +LP+F M ++++ I ++VVVVSGETGCGKT TQVPQ +LD + QG G++ NI+ TQPRRISAI VA+R+A ERCE G T GYQIRLE KRS +TRLL CTTGVLLRRL +DP L+ VSHV VDE+ + Sbjct: 93 MMEGRKRLPSFSMREEVLSVIRSSRVVVVSGETGCGKT------------------------TQVPQFILDDMDAQGLGSQCNIICTQPRRISAISVADRVANERCETLGDTVGYQIRLEVKRSERTRLLFCTTGVLLRRLVVDPELSGVSHVIVDEIHE 228
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: A0A1E7EIR8_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EIR8_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.430e-44 Identity = 89/156 (57.05%), Postives = 108/156 (69.23%), Query Frame = 1 Query: 25 RAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 R +LPA QMA +++ I++NQ+ V++G TGCGKT TQVPQLVLD LI +G GA NI++TQPRRISAIGVA RI+ ERCE+ G T GY I+LE K S +TRLLLCTTGVLLRRLQ DP LA+VSH+FVDEV + Sbjct: 4 RQRLPASQMAHEVVETIDKNQITVIAGATGCGKT------------------------TQVPQLVLDDLIARGLGAATNIIITQPRRISAIGVAGRISEERCEKVGDTCGYSIKLEKKMSNKTRLLLCTTGVLLRRLQCDPDLASVSHIFVDEVHE 135
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Match: K0SPX4_THAOC (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SPX4_THAOC) HSP 1 Score: 163 bits (413), Expect = 5.820e-44 Identity = 95/163 (58.28%), Postives = 116/163 (71.17%), Query Frame = 1 Query: 4 YAAMLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHLSSVAWASATTATQVPQLVLDRLIEQGRGARANILVTQPRRISAIGVAERIAAERCERAGQTAGYQIRLESKRSRQTRLLLCTTGVLLRRLQIDPVLATVSHVFVDEVRQ 492 + ML +R +LPAF+M D ++ I+RNQV VVSG+TGCGK VS T+ S+V W + +I + G+ ANILVTQPRRISAIGV+ERIA+ERCE+ G T GY IRL+SKRS +TRLLLCTTGVLLRRLQ DP LA+VSHVFVDEV + Sbjct: 357 FKTMLNQRTKLPAFKMKDKLLATIDRNQVTVVSGDTGCGK-VSVRHTTSG----SAVKWVFFNLTVDSALDHANDMILRNIGSEANILVTQPRRISAIGVSERIASERCEKLGHTCGYSIRLDSKRSDKTRLLLCTTGVLLRRLQCDPDLASVSHVFVDEVHE 514 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11425.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11425.1.1 >prot_P-wetherbeei_contig11425.1.1 ID=prot_P-wetherbeei_contig11425.1.1|Name=mRNA_P-wetherbeei_contig11425.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=160bp MLQKRAQLPAFQMADDIIGQIERNQVVVVSGETGCGKTVSAAIVTTPHIHback to top mRNA from alignment at P-wetherbeei_contig11425:1258..2036+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11425.1.1 ID=mRNA_P-wetherbeei_contig11425.1.1|Name=mRNA_P-wetherbeei_contig11425.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=779bp|location=Sequence derived from alignment at P-wetherbeei_contig11425:1258..2036+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11425:1258..2036+ >mRNA_P-wetherbeei_contig11425.1.1 ID=mRNA_P-wetherbeei_contig11425.1.1|Name=mRNA_P-wetherbeei_contig11425.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=480bp|location=Sequence derived from alignment at P-wetherbeei_contig11425:1258..2036+ (Phaeothamnion wetherbeei SAG_119_79)back to top |