mRNA_P-wetherbeei_contig1142.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1142.2.2
Unique NamemRNA_P-wetherbeei_contig1142.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A6I9R743_ELAGV (Bidirectional sugar transporter SWEET n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9R743_ELAGV)

HSP 1 Score: 93.6 bits (231), Expect = 7.700e-18
Identity = 62/208 (29.81%), Postives = 106/208 (50.96%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATG--KAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVK 726
            +GVV ++ S  V  +P+ +   + R G+  D  + P+V    S  LW  YG+     F +AT N    +    Y  L++  AT   +AK   +  L    +F + ++L+T     D ++ V   +G +    +V +YG+PL+A+ T++TT+S E +   L+F L    GTWT + +L  D+++ I NG+G  L  +QL+ Y      K
Sbjct:    8 IGVVGNVISVLVFASPIKTFWKIVRNGSTEDFESAPYVVTLLSSSLWVYYGITKPDGFLVATVNGVGIILEAIYVTLFLIYATPSLRAKTAILVALLDVGIFGV-VVLVTRLVAIDETTRVM-VIGAICACLNVFMYGSPLVAMKTVITTKSVEYMPFFLSFFLFLNGGTWTVYAVLDRDIFLGIPNGIGFFLGTIQLVLYMIYMNTK 213          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: UPI000B790386 (bidirectional sugar transporter SWEET17-like isoform X1 n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B790386)

HSP 1 Score: 92.8 bits (229), Expect = 1.540e-17
Identity = 67/244 (27.46%), Postives = 119/244 (48.77%), Query Frame = 1
Query:  112 GVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASV-FVLAIILLT--MFEGPDASSEVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVKAAALEVPDSSRIAAGIFCFLEGQPLLGSLLGNAQKE 834
            GV+ ++ S  + L+P+ +   + +  +  D  +LP++    +  LW+ YG+     F +AT N    L    Y  L++  A  K + +    +G   V F+ A IL+T  + +G         A G + C  ++ +YG+PL A+ T+VTT+S E +   L+F L    G WT + +LT D ++ + NG G  L A QL+ Y   R           SS ++ G+    + Q L+ S+  ++ ++
Sbjct:    9 GVIGNVISVLMFLSPVGTFWRIIKHKSTEDFESLPYICTLLNAALWTYYGIIKPGAFLVATVNGFGILVEIVYVTLFLVYAAPKMRAKTGILVGLLDVGFLAAAILVTRLVLQGQVR----IDATGFMCCGLNIVMYGSPLAAMRTVVTTKSVEFMPFLLSFFLFLNGGIWTLYAILTSDYFLGVPNGAGFLLGAAQLVLYAIYRNAN-------PSSNVSDGLEEGWQYQTLISSVASSSSEQ 241          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A1U8KE75_GOSHI (bidirectional sugar transporter SWEET17-like isoform X1 n=22 Tax=Gossypium TaxID=3633 RepID=A0A1U8KE75_GOSHI)

HSP 1 Score: 91.3 bits (225), Expect = 3.480e-17
Identity = 63/223 (28.25%), Postives = 113/223 (50.67%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAG-SVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVKAAALEVPDSSRIAAGI 774
            +GV+ ++ S  V L+P+ +   + + G+  D  +LP+V    S  LW+ YG+     + +AT N    L    Y  L++  A  K + +    +G  +V  LA  +L      +  + +  A+G + CAG ++ +YG+PL A+ T+VT++S E +   L+F L    G W  + LL  D+++ + NG+G  L   QL+ Y   R+ +      P +  I+ G+
Sbjct:    8 VGVIGNVISVLVFLSPVGTFWRIVKNGSTEDFESLPYVCTLLSSSLWTYYGITKPGAYLVATVNGFGILAEAVYVVLFLIYAPRKMRVKTGILVGILNVGFLAAAILVTHLALEGDTRI-DAIGFM-CAGLNIIMYGSPLAAMKTVVTSKSVEYMPFFLSFFLFLNGGIWAFYALLEHDIFLGVPNGIGFLLGTAQLILYAIFRKAR------PSNDTISQGL 222          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: D7SYD6_VITVI (Bidirectional sugar transporter SWEET n=2 Tax=Vitis TaxID=3603 RepID=D7SYD6_VITVI)

HSP 1 Score: 90.9 bits (224), Expect = 5.140e-17
Identity = 59/205 (28.78%), Postives = 99/205 (48.29%), Query Frame = 1
Query:  112 GVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVK 726
            GV+ ++ S  V LAP+ +   + +  +  D  +LP+V    +  LW+ YG+       +AT N    +   AY  L++  A  K + + +  +    V  LA  +L         + +  ALG +    ++ +YG+PL A+ T+VTT+S E +   L+F L    G WT + +L  D ++ + NG GL L   QL+ Y   R  K
Sbjct:    9 GVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGIIKPGEILVATVNGFGVVVEAAYVTLFLIYAPAKMRAKTVALVSLLDVGFLAAAILVTRLALQGDTRI-DALGFICSGLNIVMYGSPLAAMKTVVTTKSVEFMPFFLSFFLFLNGGIWTIYAVLVRDYFLAVPNGTGLVLGTAQLVLYAIYRNSK 212          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A6A3AVP0_HIBSY (Bidirectional sugar transporter SWEET n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AVP0_HIBSY)

HSP 1 Score: 90.5 bits (223), Expect = 1.100e-16
Identity = 59/222 (26.58%), Postives = 111/222 (50.00%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVKAAALEVPDSSRIAAGI 774
            +GV+ ++ S  V L+P+ +   + + G+  D S+LP+V    +  LW+ YG+     + +AT N    L    Y  L++  A  K + +    +G   V +L+  +L      +  S +  A+G +  A ++ +YG+PL A+ T+VT++S E +   L+F L    G W  +  L  D+++ + NG+G  L   QL+ Y    + +      P ++ I+ G+
Sbjct:   35 VGVIGNVISVLVFLSPVGTFWRIVKHGSTEDFSSLPYVCTLLNSSLWTYYGITKPGAYLVATVNGFGILAEAIYVVLFLIYAPRKMRVKTGILVGILDVGILSAAVLVTRLALEGESRI-DAIGFMCAALNIIMYGSPLAAMKTVVTSKSVEYMPFFLSFFLFLNGGVWAFYAFLEQDIFLGVPNGIGFLLGTAQLILYAIYNKAR------PSNNSISQGL 249          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: M5Y9I2_PRUPE (Bidirectional sugar transporter SWEET n=8 Tax=Prunus TaxID=3754 RepID=M5Y9I2_PRUPE)

HSP 1 Score: 88.2 bits (217), Expect = 6.200e-16
Identity = 61/210 (29.05%), Postives = 106/210 (50.48%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFS-SQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAG-SVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVKAA 732
            +GV+ ++ S  + LAP+ +   + +  +  D  +LP+V  F +  LW+ YG+   +    +AT N    +    Y  L++  A  K + +    +GT  V  L   +L  +      + +  ALG + CAG ++ +YG+PL+A+ T++TT+S E +   L+F      G WT +  L  DV++ + NG+G  L   QL+ Y   R  K A
Sbjct:    8 IGVIGNIISVLMFLAPVGTFWRIVKHRSTEDFESLPYVCTFLNSFLWTYYGIIRPAGGLLVATVNGFGVVVEIIYLILFLVYAPAKMRAKTAILIGTLDVGFLVAAILATWLALQGETRI-DALGFI-CAGLNIIMYGSPLVAMKTVITTKSVEYMPFFLSFFFFLNGGVWTLYAWLIRDVFLGVPNGIGFLLGTTQLVLYAIYRNAKPA 215          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A219UYS7_MANES (Bidirectional sugar transporter SWEET n=2 Tax=Crotonoideae TaxID=235631 RepID=A0A219UYS7_MANES)

HSP 1 Score: 87.8 bits (216), Expect = 6.420e-16
Identity = 64/207 (30.92%), Postives = 100/207 (48.31%), Query Frame = 1
Query:  112 GVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASV-FVLAIILLTMFEGPDASSEVTSALGMVACAG-SVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVK 726
            GV+ ++ S  + L+P  +   + + G+  +  +LP+V    +  LW+ YG+     F +AT N    L    Y  L++  A  K + +    LG   V F  A IL+T         +V        CAG ++ +YG+PL A+ T+VTT+S E +   L+F L    G WT +  LT D ++ + NG G  L A QL+ Y   R  K
Sbjct:    9 GVIGNVISVLMFLSPAGTFWRIVKHGSTEEFESLPYVCTLLNAALWTYYGIIKPGAFLVATVNGFGILVEIVYVTLFLIYAPLKMRAKTWILLGLLDVGFPAAAILVTRLA---LQGQVRIDATGFMCAGLNIVMYGSPLAAMKTVVTTKSVEFMPFLLSFFLFLNGGVWTLYAFLTTDYFLGVPNGAGFLLGAAQLVLYAIYRNAK 212          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A6P6A8R4_DURZI (Bidirectional sugar transporter SWEET n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6A8R4_DURZI)

HSP 1 Score: 87.8 bits (216), Expect = 6.420e-16
Identity = 60/207 (28.99%), Postives = 103/207 (49.76%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAG-SVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVK 726
            +GV+ ++ S  V L+P+ +   + + G+  D  +LP++    +  LW+ YG+       +AT N    L    Y  L++  A    + +    +G   V  LA  +L         + +  A+G + CAG ++ +YG+PL+A+ T+VTT+S E +   L+F L    G W  + LL  D+++ + NG+G  L   QLL Y   R  K
Sbjct:    8 VGVIGNVISVLVFLSPIGTFWRIIKHGSTEDFESLPYICTLLNSSLWTYYGITKPGELLVATVNGFGILVEAVYVVLFLMYAPKNMRVKTGILVGILDVGFLAAAILVTRLALQGETRI-DAIGFM-CAGLNIIMYGSPLVAMKTVVTTKSVEYMPFFLSFFLFLNGGIWAFYALLVQDIFLGVPNGIGFLLGTAQLLLYAIYRNAK 212          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A804K4Y2_MUSAM (Bidirectional sugar transporter SWEET n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804K4Y2_MUSAM)

HSP 1 Score: 87.4 bits (215), Expect = 1.020e-15
Identity = 57/207 (27.54%), Postives = 98/207 (47.34%), Query Frame = 1
Query:  109 LGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVRRVKA 729
            +GV+ ++ S  V  +P+ +   + R G+  D  + P+V    S  LW  YG+       +AT N    +    Y  L++  AT + + +    +    V  L  ++L        S  V   +G +    +V +YG+PL A+ T++TT+S E +   L+F L    G W  + +L  D+++ I NG+GL L  +QL+ Y      KA
Sbjct:    8 VGVIGNIISVLVFASPIKTFWRIARSGSTEDFESAPYVVTLLSSSLWVYYGITKPGGLLVATVNGVGVVMEAVYVTLFLLFATPQLRAKTAVLVAALDVGFLGAVVLVTSLAVHGSLRVM-VIGTICACLNVFMYGSPLAAMKTVITTKSVEYMPFFLSFFLFLNGGIWIVYAILDKDIFLGIPNGIGLILGTIQLILYLIYVNAKA 213          
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Match: A0A0P1AIJ6_PLAHL (3-like protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIJ6_PLAHL)

HSP 1 Score: 87.4 bits (215), Expect = 1.370e-15
Identity = 51/211 (24.17%), Postives = 98/211 (46.45%), Query Frame = 1
Query:   91 TMSTSALGVVASLCSYSVGLAPLPSMIGMNRLGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYCCLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASS--EVTSALGMVACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLLTDDVWVTITNGVGLALAALQLLAYFYVR 717
            T+  S L  + ++ +  VGL+PLP    + +    G+ S LP   +FC+  +W+ YG ++  +FP+   NL        +  ++   +T +A    IW      + +    L+    G    +  +V S  G VA A ++ALY +PL ++  ++ T+    L + ++      A  W  + ++  D++V + N +G+ L   Q+  Y   R
Sbjct:    2 TLILSILRALTTIAALFVGLSPLPDYYRIYQTHTTGEVSILPITLLFCNSFMWTIYGFWTHNIFPVFVCNLYGMTTSIVFSSIFYRWSTDRASVLKIWSCAACILAIGTFYLILGSNGVTNQNRDQVASTFGFVAVAINIALYASPLASMKKVIETKDASSLPITISIVFLGNAALWVLYAIIAGDMFVMVPNLLGMLLCTAQVALYLRYR 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1142.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I9R743_ELAGV7.700e-1829.81Bidirectional sugar transporter SWEET n=2 Tax=Elae... [more]
UPI000B7903861.540e-1727.46bidirectional sugar transporter SWEET17-like isofo... [more]
A0A1U8KE75_GOSHI3.480e-1728.25bidirectional sugar transporter SWEET17-like isofo... [more]
D7SYD6_VITVI5.140e-1728.78Bidirectional sugar transporter SWEET n=2 Tax=Viti... [more]
A0A6A3AVP0_HIBSY1.100e-1626.58Bidirectional sugar transporter SWEET n=2 Tax=Hibi... [more]
M5Y9I2_PRUPE6.200e-1629.05Bidirectional sugar transporter SWEET n=8 Tax=Prun... [more]
A0A219UYS7_MANES6.420e-1630.92Bidirectional sugar transporter SWEET n=2 Tax=Crot... [more]
A0A6P6A8R4_DURZI6.420e-1628.99Bidirectional sugar transporter SWEET n=1 Tax=Duri... [more]
A0A804K4Y2_MUSAM1.020e-1527.54Bidirectional sugar transporter SWEET n=1 Tax=Musa... [more]
A0A0P1AIJ6_PLAHL1.370e-1524.173-like protein n=1 Tax=Plasmopara halstedii TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1142contigP-wetherbeei_contig1142:4530..7756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3750.XP_008360271.1
PFAMsMtN3_slv
Model size1677
Max annot lvl35493|Streptophyta
KEGG koko:K15382
KEGG TC9.A.58.1
Hectar predicted targeting categoryother localisation
GOsGO:0000325,GO:0003674,GO:0005215,GO:0005353,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006950,GO:0006995,GO:0007034,GO:0007154,GO:0007623,GO:0008150,GO:0008643,GO:0008645,GO:0009266,GO:0009267,GO:0009314,GO:0009409,GO:0009416,GO:0009605,GO:0009628,GO:0009642,GO:0009646,GO:0009705,GO:0009743,GO:0009746,GO:0009750,GO:0009987,GO:0009991,GO:0010033,GO:0015144,GO:0015145,GO:0015149,GO:0015749,GO:0015755,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0031090,GO:0031224,GO:0031667,GO:0031668,GO:0031669,GO:0033231,GO:0033554,GO:0034219,GO:0034284,GO:0034486,GO:0042221,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043562,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048511,GO:0050896,GO:0051119,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0051716,GO:0055085,GO:0065003,GO:0070417,GO:0071496,GO:0071702,GO:0071840,GO:0098588,GO:0098805,GO:1901700,GO:1902334
Exons7
Evalue1.22e-20
EggNOG OGsKOG1623@1|root,KOG1623@2759|Eukaryota,37RMN@33090|Viridiplantae,3GGAT@35493|Streptophyta,4JDZJ@91835|fabids
Ec32 ortholog descriptionMtN3-like protein
Ec32 orthologEc-01_004270.1
Descriptionsugar transporter
Cds size1311
COG categoryL
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1142.2.2prot_P-wetherbeei_contig1142.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1142 4863..7723 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185910.980124-UTR-P-wetherbeei_contig1142:4529..48621683185910.980124-UTR-P-wetherbeei_contig1142:4529..4862Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1142 4530..4862 -
1683185911.041771-UTR-P-wetherbeei_contig1142:7723..77561683185911.041771-UTR-P-wetherbeei_contig1142:7723..7756Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1142 7724..7756 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185910.9895513-CDS-P-wetherbeei_contig1142:4862..55131683185910.9895513-CDS-P-wetherbeei_contig1142:4862..5513Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 4863..5513 -
1683185910.9970932-CDS-P-wetherbeei_contig1142:5796..59351683185910.9970932-CDS-P-wetherbeei_contig1142:5796..5935Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 5797..5935 -
1683185911.004668-CDS-P-wetherbeei_contig1142:6300..64411683185911.004668-CDS-P-wetherbeei_contig1142:6300..6441Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 6301..6441 -
1683185911.0122373-CDS-P-wetherbeei_contig1142:6723..69001683185911.0122373-CDS-P-wetherbeei_contig1142:6723..6900Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 6724..6900 -
1683185911.019722-CDS-P-wetherbeei_contig1142:7196..72601683185911.019722-CDS-P-wetherbeei_contig1142:7196..7260Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 7197..7260 -
1683185911.0268476-CDS-P-wetherbeei_contig1142:7450..75411683185911.0268476-CDS-P-wetherbeei_contig1142:7450..7541Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 7451..7541 -
1683185911.0342467-CDS-P-wetherbeei_contig1142:7675..77231683185911.0342467-CDS-P-wetherbeei_contig1142:7675..7723Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1142 7676..7723 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1142.2.2

>prot_P-wetherbeei_contig1142.2.2 ID=prot_P-wetherbeei_contig1142.2.2|Name=mRNA_P-wetherbeei_contig1142.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp
MPSQCDYSFASASSLEAFCTMSTSALGVVASLCSYSVGLAPLPSMIGMNR
LGNVGDRSALPFVAMFCSGMLWSSYGVFSSQVFPLATTNLPICLFGEAYC
CLYIAAATGKAKRRAIWELGTASVFVLAIILLTMFEGPDASSEVTSALGM
VACAGSVALYGAPLLAIHTMVTTRSPELLCLPLTFALAAAAGTWTAFGLL
TDDVWVTITNGVGLALAALQLLAYFYVRRVKAAALEVPDSSRIAAGIFCF
LEGQPLLGSLLGNAQKEIFADVRSELTPLVAAPMDGSFSSLGAAAGNTAG
GAAPPAAAVSATVAARAAGCVLPASGSPAAAAAAAPAAPPVRSAASAPAA
SAGFGTCRLQLLEGGWPAPPPGADSMFASPQADGYGWDREEGDSSRSSGA
EGGGRGVGGNGQEPWQAGGFGSAPPLEPPPRELWVV*
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mRNA from alignment at P-wetherbeei_contig1142:4530..7756-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1142.2.2 ID=mRNA_P-wetherbeei_contig1142.2.2|Name=mRNA_P-wetherbeei_contig1142.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3227bp|location=Sequence derived from alignment at P-wetherbeei_contig1142:4530..7756- (Phaeothamnion wetherbeei SAG_119_79)
CAAAAAGTCACGATCGCTCCCTTCGAAAGCGCGATGCCTTCGCAATGCGA TTACTCGTTCGCATCTGCCAGTTCGCTGGAGGTGAGGGGGCCGCGTGCTT TGGGCCCTGGTTTCTCGCGTGAAAGGATCGGAGAGTATCCCGAAACGACC TTCCTTCGCTCTCTGGGCTCATTCCTTATCCCTCTTCTCTCCATTCCCTT TCCTCCTGCTTCTAGGCGTTTTGCACCATGAGCACGAGCGCGCTCGGCGT TGTTGCGAGCTTGTGCTCTTACAGCGTTGGCCTTGCCCCTCTCCCGTCGA TGATTGGTGAGTTGCATGCGTACTGAAGCACATTACGCTCGCACATCCAT TAAAGCTCGCATGGGGCAATGGAGTACCGCCTCATCTTCTACAACAAAGA AGAGGGCTGCAACTTCTTGTCCCTAAATTCCTCATCCTAGCTTCATGTTC CTGGTCTCTTAAAGCACTCCTGTGCCTCCTTCGTTCCCTTTCCCAGGCAT GAATAGACTGGGAAATGTTGGCGACCGCTCCGCCTTGCCTTTTGTGGCAA TGTTCTGCAGGTACCACTTGCGGTCTATGGTGTTAGCGTGCCCCGCGTTG TGCGTCGACGCCATAGTTCTTTTTCACCTGCTAACGTTTGGCGGCGCATC TTGTCTTACAGCTCCGCCCGAGCTAGGACGGCTTTGCGTACGCCGTGTTT TCGACCGCCTTAGATCCTTTGCCTAACAGTTACTGAAGCCTGATGAATCT AACCCAGTCTATCGAATTTCCGATGCAGTCTCATCCCCCCGCTGCACCAA ATACACATACGTGCTGCCCGTTTCGCACCATACCACCCGCGCCTACATTC CTGCAGCGGCATGCTGTGGAGCAGCTATGGCGTGTTCTCGTCGCAAGTCT TCCCGCTGGCGACGACCAACCTGCCCATCTGCCTGTTTGGGGAGGCGTAC TGCTGCCTCTACATCGCGGCCGCCACGGGCAAGGCGAAGCGAAGAGCTAT CTGGGAGCTCGGAACGGCAAGCGTCTTTGTCCTGTGAGTAAAGACTGAAG GCGTTAAGATTGTTCCGTTACTTCTGAAAAATGCAGTTCCAAAGAGCTGC TTTTTGACCCGCCGCGCGCCTATGTGGCAACGGCCCGGATTTGTAGTCAA GAACGCGCCGTTTTCTTCTGGTTAGCGAAATCTCTGCCGCTAGCTCATTT CGCATTCTTCTTTCTCGACGCCCCTCCATTCCACATCTTTTCGCCGAGTC GTTGGCCCTTCCCTTCATTACATTGGTCTCACCCCATCGAACCCCTTTCT CTTTCTTCTGTGAAGCGCCATCATCCTGCTGACCATGTTCGAGGGGCCCG ACGCCAGCTCAGAGGTGACCTCGGCCCTAGGCATGGTCGCGTGCGCCGGC AGTGTCGCCCTCTACGGCGCCCCTCTGCTGGCAATCCACACCATGGTCAC CACCAGGCAAGAACGGAACGTTTTCCACTCAGTAGGCGCTTCTCCGGGCG CTTGATATCGACACTCCACCTTCACCCTTTTGAGTTTTGGCCCCCGCGGT TTCAGTCTTTCCAGTCTTCTTCTCAACGGTAGCGCAAACGTCGCGGCGAA TGTTCTGTTGCGCTGTCCATCGACATCGCTCTTGCTTTGCTTGTGAGCCG GGGATCCCTTGCTGACGACTCTCGTTCCCACTCACGCTTCGCGATCCGCC GCTCATCGTCCGACCGCTGCTGCCGCCGCCGCCGCCGCCGCCGCCGCCGC CGCCGTCCAATCACCGCTACCGCCGCCACCGCTGATTGACGGAACAACGG CCGGCCGATGTGCGCTGGCAGGTCTCCGGAGCTCCTGTGCCTGCCGCTGA CATTCGCGCTCGCAGCGGCCGCGGGGACGTGGACGGCCTTCGGGCTGCTC ACCGACGACGTGTGGGTCACCATCACCAACGGCGTCGGGCTGGCTCTCGC CGCTCTACAGGTCCGTCCCGTTCCGGTCCATCCGCCCGTGTTCTGTGTGC CTGGATGATCGTCCTGATTGCTTTGTCTTGTTGCATGCTCCGCTGGCACC GTCTGGTGGCGAGAGAAAGAGCACTTTGCCGGTTTGGTGTTGATGCGGCG CCGTGCTCGCAATTGCCGCGGCACTGAAATACTGTGATAACAGGAAAAGA AGTCAACGTTGTTCGCTTCTAACCTTTCGGAACTCCATTTCATTTCCTGC TTTCATCGGTCGCTCTTCCTCTCCAATGCTGTGCCGGCGGCAGCTCCTGG CGTACTTCTACGTCCGACGTGTCAAGGCGGCGGCCCTGGAGGTTCCCGAC TCGTCGCGCATCGCCGCCGGCATTTTTTGCTTCCTAGAAGGGCAGCCGCT GCTCGGTAGCCTGCTTGGAAACGCCCAGAAGGAGATTTTCGCCGACGTGC GGAGCGAGCTGACGCCGCTCGTCGCTGCCCCGATGGACGGAAGCTTCAGT AGCCTCGGGGCCGCTGCCGGGAACACGGCCGGCGGCGCCGCGCCGCCGGC GGCGGCCGTCTCGGCCACGGTTGCCGCGAGGGCGGCCGGCTGTGTGTTGC CGGCTTCGGGATCGCCCGCAGCTGCGGCGGCGGCGGCGCCAGCGGCGCCA CCTGTCAGGTCGGCGGCTTCGGCGCCGGCGGCGTCGGCCGGGTTCGGCAC GTGCCGCCTCCAACTGCTGGAGGGTGGGTGGCCGGCGCCGCCTCCGGGGG CGGACAGCATGTTTGCATCCCCGCAAGCGGACGGCTACGGCTGGGACAGA GAAGAGGGCGACAGCAGCCGCTCCAGCGGTGCCGAAGGGGGCGGCAGAGG CGTCGGTGGCAACGGCCAAGAGCCGTGGCAGGCGGGTGGGTTCGGGTCTG CGCCGCCGCTGGAACCGCCGCCGCGCGAGCTGTGGGTTGTCTGACTTCAC CTGTCAGTCGAAACCAGGAGAGGGCGGGAGGACGGAAGCAGCGCTGTGGC TACAGAAGAGAGGCATGCTGTAGTGGGGAAAAGAATTTTTGGTGTGCGCA CAGTCGCGTCCACGGCGGCGGCATTCCGGTGCAGCTGGCACAAAGCGTCC GGGCGCCTATTGGCACTCGCTTGGAAACAAGCTACACGACGGCGAAAAGA GGGAACATTCGCCGTTATTTAGCTTTAGGCCCGGCGGCGCACGCGGCCTG GCGCCCTGCCGCCGCTGGACCAAGGCTGCTGAGCAGATAATTTTGAAAAA TCGCTGGGCGTGATGAGATGATGGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1142:4530..7756-

>mRNA_P-wetherbeei_contig1142.2.2 ID=mRNA_P-wetherbeei_contig1142.2.2|Name=mRNA_P-wetherbeei_contig1142.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig1142:4530..7756- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCTTCGCAATGCGATTACTCGTTCGCATCTGCCAGTTCGCTGGAGGC
GTTTTGCACCATGAGCACGAGCGCGCTCGGCGTTGTTGCGAGCTTGTGCT
CTTACAGCGTTGGCCTTGCCCCTCTCCCGTCGATGATTGGCATGAATAGA
CTGGGAAATGTTGGCGACCGCTCCGCCTTGCCTTTTGTGGCAATGTTCTG
CAGCGGCATGCTGTGGAGCAGCTATGGCGTGTTCTCGTCGCAAGTCTTCC
CGCTGGCGACGACCAACCTGCCCATCTGCCTGTTTGGGGAGGCGTACTGC
TGCCTCTACATCGCGGCCGCCACGGGCAAGGCGAAGCGAAGAGCTATCTG
GGAGCTCGGAACGGCAAGCGTCTTTGTCCTCGCCATCATCCTGCTGACCA
TGTTCGAGGGGCCCGACGCCAGCTCAGAGGTGACCTCGGCCCTAGGCATG
GTCGCGTGCGCCGGCAGTGTCGCCCTCTACGGCGCCCCTCTGCTGGCAAT
CCACACCATGGTCACCACCAGGTCTCCGGAGCTCCTGTGCCTGCCGCTGA
CATTCGCGCTCGCAGCGGCCGCGGGGACGTGGACGGCCTTCGGGCTGCTC
ACCGACGACGTGTGGGTCACCATCACCAACGGCGTCGGGCTGGCTCTCGC
CGCTCTACAGCTCCTGGCGTACTTCTACGTCCGACGTGTCAAGGCGGCGG
CCCTGGAGGTTCCCGACTCGTCGCGCATCGCCGCCGGCATTTTTTGCTTC
CTAGAAGGGCAGCCGCTGCTCGGTAGCCTGCTTGGAAACGCCCAGAAGGA
GATTTTCGCCGACGTGCGGAGCGAGCTGACGCCGCTCGTCGCTGCCCCGA
TGGACGGAAGCTTCAGTAGCCTCGGGGCCGCTGCCGGGAACACGGCCGGC
GGCGCCGCGCCGCCGGCGGCGGCCGTCTCGGCCACGGTTGCCGCGAGGGC
GGCCGGCTGTGTGTTGCCGGCTTCGGGATCGCCCGCAGCTGCGGCGGCGG
CGGCGCCAGCGGCGCCACCTGTCAGGTCGGCGGCTTCGGCGCCGGCGGCG
TCGGCCGGGTTCGGCACGTGCCGCCTCCAACTGCTGGAGGGTGGGTGGCC
GGCGCCGCCTCCGGGGGCGGACAGCATGTTTGCATCCCCGCAAGCGGACG
GCTACGGCTGGGACAGAGAAGAGGGCGACAGCAGCCGCTCCAGCGGTGCC
GAAGGGGGCGGCAGAGGCGTCGGTGGCAACGGCCAAGAGCCGTGGCAGGC
GGGTGGGTTCGGGTCTGCGCCGCCGCTGGAACCGCCGCCGCGCGAGCTGT
GGGTTGTCTGA
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