mRNA_P-wetherbeei_contig11401.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11401.1.1
Unique NamemRNA_P-wetherbeei_contig11401.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A345ZZ82_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZZ82_9HYPH)

HSP 1 Score: 369 bits (946), Expect = 2.290e-126
Identity = 195/267 (73.03%), Postives = 225/267 (84.27%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALA--ALMAGKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLADF 795
            R++VAGAGGRMGRTLVKAI++TPG+TL GALE A SPL+G DAG LAGL  N +KL  DA A L  ADAVIDFTIP AT+AL   A  AGKVH+IGTTG+SA +E +I  A+K A IVKSGNMSLGVNL+AALT+RVA+ LDQ+FDIEI+EMHHN+KIDAPSGTAL+ G AAA+GRGIDL K S R RDG TGARK G IGFA+LRGG VVG+H V+FAGPAERIELVHKA+DRM+FA GA+HAA W+R +KPGLYSM+DVLGL DF
Sbjct:    5 RLIVAGAGGRMGRTLVKAIADTPGLTLAGALEDARSPLLGWDAGTLAGLGENGIKLTGDAGALLTQADAVIDFTIPAATLALVEQAAKAGKVHVIGTTGISAADEEKIAAAAKTATIVKSGNMSLGVNLLAALTKRVARTLDQTFDIEILEMHHNQKIDAPSGTALLLGHAAADGRGIDLAKRSVRSRDGHTGARKAGDIGFATLRGGTVVGEHTVMFAGPAERIELVHKAEDRMIFARGALHAAQWARNQKPGLYSMLDVLGLKDF 271          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A140GV36_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GV36_9HYPH)

HSP 1 Score: 367 bits (941), Expect = 1.320e-125
Identity = 195/267 (73.03%), Postives = 224/267 (83.90%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMA--GKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLADF 795
            R++VAGAGGRMGRTL+KAI+++  +TL GALEG GS +IG+D+G LAGL  N + + +DA   L+ AD VIDFTIP ATVAL  L A  G VH+IGTTGLS   E  + +A+K A IVKSGN SLGVNL+AALT+RVAK LD SFDIEI EMHHNKKIDAPSGTALMFGRAAAEGRGIDL K+SERGRDGETGARK G IGFASLRGG+VVG+H VIFAGPAER+ELVH+A+DRM+FA GA+HAALW+RGK PGLYSM DVLGL DF
Sbjct:    5 RLIVAGAGGRMGRTLIKAIADSKELTLAGALEGPGSAVIGRDSGELAGLGKNGIAVTSDAAGLLSKADGVIDFTIPAATVALVELTARAGCVHVIGTTGLSGVNEKIVAEAAKKAPIVKSGNFSLGVNLIAALTKRVAKTLDASFDIEIFEMHHNKKIDAPSGTALMFGRAAAEGRGIDLAKHSERGRDGETGARKMGDIGFASLRGGSVVGEHSVIFAGPAERVELVHRAEDRMIFARGALHAALWARGKAPGLYSMADVLGLKDF 271          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A6L5FNT5_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FNT5_9HYPH)

HSP 1 Score: 362 bits (929), Expect = 7.940e-124
Identity = 187/264 (70.83%), Postives = 226/264 (85.61%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATV--ALAALMAGKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGL 786
            R++VAGAGGRMGRTLVK I+ETPG+TL GA+E AG+ ++GQDAGVLAGL AN V +G D KA LANAD +IDFT+P ATV  A++A   G VHIIGTTG S+++EARI +A++ AVIVKSGNMSLGVNL+AAL ++VA+ LD  FDIEIVEMHHNKK+DAPSGTALMFGRAAAEGRG+DL +++   R+G  GAR  G+IGFA+LRGG VVGDH VIFAGPAER+ELVHKA+DRM+FA GA+ AALW+RG++PGLYSM DVLG+
Sbjct:    5 RLIVAGAGGRMGRTLVKTIAETPGLTLAGAVEAAGASMLGQDAGVLAGLGANGVTVGTDVKALLANADGIIDFTVPAATVDCAMSAAGRGAVHIIGTTGFSSEDEARIAEAARRAVIVKSGNMSLGVNLLAALVKQVAQKLDDDFDIEIVEMHHNKKVDAPSGTALMFGRAAAEGRGVDLKQHTIPAREGHAGARARGNIGFAALRGGTVVGDHSVIFAGPAERVELVHKAEDRMIFARGALKAALWARGQRPGLYSMADVLGI 268          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A6N7H1Y3_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H1Y3_9HYPH)

HSP 1 Score: 357 bits (916), Expect = 8.370e-122
Identity = 185/266 (69.55%), Postives = 220/266 (82.71%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMA--GKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLAD 792
            R++VAGAGGRMGRTL++A++   G  + GA++  GS ++G+DAG LAGL AN VK+  DA A LA+AD +IDFT+P A+V  A L A  GK+HI+GTTG S + E  I++A+  AVIVKSGNMSLGVNL+AAL +RVA  LD+ FDIEI EMHHNKK+DAPSGTALMFGRAAAEGR +DL + S RGRDG+TGAR+ G IGFASLRGG VVGDH VIFAGPAERIELVHKA+DRM+FA GAVHAALW+RGKKPGLYSM DVLGL+D
Sbjct:    5 RLIVAGAGGRMGRTLIQAVTAADGAVVAGAVDAPGSAVVGRDAGELAGLGANGVKITTDAAALLADADGLIDFTVPAASVIYAELAAKAGKIHILGTTGFSGENETLIEEAATRAVIVKSGNMSLGVNLLAALVKRVAATLDEDFDIEIFEMHHNKKVDAPSGTALMFGRAAAEGRKVDLAQRSVRGRDGDTGARRKGDIGFASLRGGTVVGDHRVIFAGPAERIELVHKAEDRMIFARGAVHAALWARGKKPGLYSMADVLGLSD 270          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A371B9Q6_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A371B9Q6_9HYPH)

HSP 1 Score: 354 bits (909), Expect = 9.710e-121
Identity = 185/267 (69.29%), Postives = 222/267 (83.15%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMA--GKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLADF 795
            R++V GAGGRMGRTLVKAI+E+   TL GALE A SPLIG DAG LAG+  N VKL  D    LANAD ++DFT P A++  AA  A  GKVH+IGTTG+SA ++ ++ +A+K AVIVKSGNMSLGVNL+AALT+RVAK LDQ +DIEI+EMHHN+K+DAPSGTAL+ GRAAAEGR IDL++ S R RDG TGAR+PG IGFA+LRGG+VVG+H V+FAGPAERIEL HKA+DRM+FA GA+HAALW++ +KPGLYSMMDVLGL DF
Sbjct:    5 RLIVTGAGGRMGRTLVKAIAESKDFTLAGALEDARSPLIGWDAGHLAGIGENGVKLSGDIAPLLANADGIVDFTAPAASLEYAARAAATGKVHVIGTTGMSAGDDGKVAEAAKGAVIVKSGNMSLGVNLLAALTKRVAKTLDQIYDIEILEMHHNQKVDAPSGTALLLGRAAAEGRQIDLNQRSVRSRDGHTGAREPGDIGFATLRGGSVVGEHTVMFAGPAERIELTHKAEDRMIFARGALHAALWAKKQKPGLYSMMDVLGLKDF 271          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A1Q4D9J5_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4D9J5_9HYPH)

HSP 1 Score: 353 bits (906), Expect = 3.190e-120
Identity = 188/271 (69.37%), Postives = 221/271 (81.55%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMA--GKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKK----PGLYSMMDVLGLADF 795
            R++V GAGGRMGR LVKAISE   + L GAL+ A SPL+GQD+G LAGLPAN +KL  DA A +  AD ++DFT P ATVA AAL A  G VHIIGTTGLS+D+EARI +A K AVIVKSGNMSLGVNL+AA+ +RVA+ LD+ FDIE+VEMHHNKK+DAPSGTAL+ G AAAEGRGI L ++SERGRDG TGAR+ G+IGFASLRGG VVG+H+VIFAGP ERIEL HKA DRM+FA GA+ AALW+ G+K    PG+YSM+DVL L DF
Sbjct:    5 RLIVTGAGGRMGRALVKAISENDKLALAGALDDARSPLLGQDSGTLAGLPANGIKLTGDAAALMDKADGLVDFTAPAATVAYAALAAQRGLVHIIGTTGLSSDDEARIVEAGKQAVIVKSGNMSLGVNLLAAVVKRVARTLDEDFDIEVVEMHHNKKVDAPSGTALLLGEAAAEGRGITLAQHSERGRDGHTGARERGAIGFASLRGGTVVGEHNVIFAGPTERIELAHKADDRMIFARGALKAALWAHGRKQGQKPGVYSMLDVLDLKDF 275          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: DAPB_RHOP2 (4-hydroxy-tetrahydrodipicolinate reductase n=6 Tax=Rhodopseudomonas TaxID=1073 RepID=DAPB_RHOP2)

HSP 1 Score: 352 bits (903), Expect = 7.940e-120
Identity = 186/267 (69.66%), Postives = 216/267 (80.90%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMA--GKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLADF 795
            R++VAGAGGRMGR L +AISET GV L GALE  GS L+GQDAGVLAGLPAN V+L AD     ANAD ++DFT+P AT+A  A+ A  G VH+IGTTGLS+ + A I+  ++ A++VKSGNMSLGVNL+AALT+RVA+ L  +FDIEIVEMHH  KIDAPSGTAL+ G AAA GRG+DLD +S RGRDG TGARK G IGFASLRGG V GDH VIFAGP ERIEL HKA+DRM+FA GA+ AA W+ GKKPGLYSMMDVLGLA+F
Sbjct:    5 RLIVAGAGGRMGRALTRAISETKGVVLTGALEAPGSELLGQDAGVLAGLPANGVELSADLWTLSANADGILDFTVPGATIANVAIAAQRGIVHVIGTTGLSSSDNAVIQSVTRQAIVVKSGNMSLGVNLLAALTKRVAQSLGDNFDIEIVEMHHRAKIDAPSGTALLLGEAAALGRGVDLDSHSARGRDGLTGARKTGDIGFASLRGGTVTGDHSVIFAGPYERIELAHKAEDRMIFAHGALKAAQWAHGKKPGLYSMMDVLGLAEF 271          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A0S3Q0R2_9BRAD (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3Q0R2_9BRAD)

HSP 1 Score: 350 bits (899), Expect = 3.110e-119
Identity = 186/266 (69.92%), Postives = 222/266 (83.46%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALAALMAGK--VHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLAD 792
            RVV+AGAGGRMGRTL++A+SE  G T+VGAL+ + SP IGQD+G+LAGLPANN+K+ +DA+AAL  A  +IDFTIP ATVA AA+ A    VH+IGTTGL A +E +I DA+   VIVKSGNMSLGVNL+AALT++VA  LD  FDIE++EMHHN+KIDAPSGTAL+ GRAAAEGRGIDLD +S+R RDG TGARK G IGFA+LRGGNVVGDH V+F   +ERIEL HKA DRMLFA+GA+ AA+W R +KPGLYSMMDVLGL+D
Sbjct:    5 RVVIAGAGGRMGRTLIRAVSEASGFTVVGALDVSNSPNIGQDSGMLAGLPANNIKITSDAEAALKAAHCLIDFTIPAATVAYAAVTAKTRCVHVIGTTGLGAIDEKQIADAATETVIVKSGNMSLGVNLLAALTKKVAAALDADFDIEVLEMHHNQKIDAPSGTALLLGRAAAEGRGIDLDAHSQRVRDGHTGARKRGDIGFATLRGGNVVGDHTVMFVSGSERIELSHKASDRMLFAAGALKAAVWGRKQKPGLYSMMDVLGLSD 270          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A833GFZ9_9HYPH (4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GFZ9_9HYPH)

HSP 1 Score: 349 bits (896), Expect = 9.530e-119
Identity = 189/268 (70.52%), Postives = 218/268 (81.34%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALA--ALMAGKVHIIGTTGLSADEEARIKDASK-NAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLADF 795
            R+V+AGAGGRMGRTLVKAI+ET G+ +  ALE AGSPL+GQD G LAGL  N + L ++A AALA AD ++DFTIP ATV L   A  A  VH+IGTTG S D+E  I  A+   AVIVKSGNMSLGVNL+AAL RRVA+ LD SFDIE++EMHHNKKIDAPSGTAL+ GRAAAEGRGIDLDK S   R G TGARK G IGFA+LRGG+VVG+H+V+FAGPAERIEL HKA+DRM+FA GA+ AALW+RG+KPGLYSM DVLGL DF
Sbjct:    5 RLVIAGAGGRMGRTLVKAIAETKGLVVAAALEQAGSPLLGQDCGELAGLGRNGIALTSEAPAALAQADGIVDFTIPAATVDLVRKAAPARLVHVIGTTGFSPDDEKAIAAAAAAGAVIVKSGNMSLGVNLLAALVRRVARTLDDSFDIEVLEMHHNKKIDAPSGTALLLGRAAAEGRGIDLDKRSVMTRQGHTGARKAGDIGFATLRGGSVVGEHNVMFAGPAERIELAHKAEDRMIFARGALKAALWARGQKPGLYSMADVLGLKDF 272          
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Match: A0A1Q7B755_9PROT (4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7B755_9PROT)

HSP 1 Score: 348 bits (894), Expect = 1.850e-118
Identity = 181/266 (68.05%), Postives = 219/266 (82.33%), Query Frame = 1
Query:    1 RVVVAGAGGRMGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADAKAALANADAVIDFTIPKATVALA--ALMAGKVHIIGTTGLSADEEARIKDASKNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPSGTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVGDHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVLGLAD 792
            R++VAGAGGRMGRTL+  I+ T GV L GA+E A S +IG+DAG LAGL  N + +  D +  LA+AD ++DFT+P AT+A A  A   G VH+IGTTGL+ + EA I +A+K AVIVKSGNMS+GVNL+AAL +RVAK LD+ FDIEI+EMHHNKK+DAPSGTALM GRAAA+GRG+DLD+ S RGRDG TGAR  G IGFASLRGG+VVGDH VIFAGPAERIEL+H+A+DRM+FA GA+ AALW+RG+KPGLYSM DVLGL+D
Sbjct:    5 RLIVAGAGGRMGRTLIHTIAATDGVILAGAVEAASSAVIGRDAGELAGLGRNGIAVQTDVEPLLAHADGLLDFTVPAATIAFAEHAARKGCVHVIGTTGLTGENEALIAEAAKRAVIVKSGNMSMGVNLLAALVKRVAKTLDEDFDIEILEMHHNKKVDAPSGTALMLGRAAAQGRGVDLDQRSVRGRDGTTGARCAGDIGFASLRGGSVVGDHTVIFAGPAERIELMHRAEDRMIFARGALRAALWARGRKPGLYSMADVLGLSD 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11401.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A345ZZ82_9HYPH2.290e-12673.034-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A140GV36_9HYPH1.320e-12573.034-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A6L5FNT5_9HYPH7.940e-12470.834-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A6N7H1Y3_9HYPH8.370e-12269.554-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A371B9Q6_9HYPH9.710e-12169.294-hydroxy-tetrahydrodipicolinate reductase n=2 Tax... [more]
A0A1Q4D9J5_9HYPH3.190e-12069.374-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
DAPB_RHOP27.940e-12069.664-hydroxy-tetrahydrodipicolinate reductase n=6 Tax... [more]
A0A0S3Q0R2_9BRAD3.110e-11969.924-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A833GFZ9_9HYPH9.530e-11970.524-hydroxy-tetrahydrodipicolinate reductase n=1 Tax... [more]
A0A1Q7B755_9PROT1.850e-11868.054-hydroxy-tetrahydrodipicolinate reductase n=3 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11401contigP-wetherbeei_contig11401:3..800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog316058.RPB_0435
Preferred namedapB
PFAMsDapB_C,DapB_N
Model size798
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00478
KEGG koko:K00215
KEGG ReactionR04198,R04199
KEGG Pathwayko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230
KEGG ModuleM00016,M00525,M00526,M00527
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576
Exons1
Evalue5.31e-115
EggNOG OGsCOG0289@1|root,COG0289@2|Bacteria,1MUCT@1224|Proteobacteria,2TSFJ@28211|Alphaproteobacteria,3JRSZ@41294|Bradyrhizobiaceae
EC1.17.1.8
DescriptionCatalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate
Cds size768
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185910.3109448-UTR-P-wetherbeei_contig11401:2..321683185910.3109448-UTR-P-wetherbeei_contig11401:2..32Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11401 3..32 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185910.3206072-CDS-P-wetherbeei_contig11401:32..8001683185910.3206072-CDS-P-wetherbeei_contig11401:32..800Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11401 33..800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11401.1.1prot_P-wetherbeei_contig11401.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11401 33..800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11401.1.1

>prot_P-wetherbeei_contig11401.1.1 ID=prot_P-wetherbeei_contig11401.1.1|Name=mRNA_P-wetherbeei_contig11401.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MGRTLVKAISETPGVTLVGALEGAGSPLIGQDAGVLAGLPANNVKLGADA
KAALANADAVIDFTIPKATVALAALMAGKVHIIGTTGLSADEEARIKDAS
KNAVIVKSGNMSLGVNLVAALTRRVAKVLDQSFDIEIVEMHHNKKIDAPS
GTALMFGRAAAEGRGIDLDKNSERGRDGETGARKPGSIGFASLRGGNVVG
DHHVIFAGPAERIELVHKAQDRMLFASGAVHAALWSRGKKPGLYSMMDVL
GLADF*
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mRNA from alignment at P-wetherbeei_contig11401:3..800+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11401.1.1 ID=mRNA_P-wetherbeei_contig11401.1.1|Name=mRNA_P-wetherbeei_contig11401.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig11401:3..800+ (Phaeothamnion wetherbeei SAG_119_79)
CGGGTTGTGGTGGCGGGCGCCGGCGGGCGCATGGGGCGCACGCTCGTCAA GGCGATCAGCGAGACGCCGGGCGTGACGCTCGTTGGCGCTCTGGAGGGCG CGGGCTCGCCGCTCATCGGCCAGGACGCGGGCGTGCTCGCGGGCTTGCCC GCGAATAACGTCAAGCTCGGCGCTGATGCGAAGGCCGCGCTGGCCAACGC CGACGCGGTGATCGATTTCACCATCCCGAAGGCGACCGTGGCCCTCGCTG CACTGATGGCAGGCAAGGTGCATATCATCGGCACCACTGGGCTTTCGGCG GACGAAGAAGCCAGGATCAAGGACGCGTCGAAGAACGCCGTGATCGTGAA GTCCGGCAACATGAGCCTCGGCGTCAATCTGGTCGCGGCGCTCACCAGGC GCGTGGCGAAGGTGCTCGATCAGTCGTTCGACATCGAGATCGTCGAGATG CACCACAACAAGAAGATCGATGCGCCGTCCGGCACCGCGCTGATGTTCGG CCGCGCGGCGGCGGAAGGCCGCGGCATCGATCTCGACAAGAACTCCGAAC GTGGCCGCGATGGCGAGACCGGCGCGCGCAAGCCCGGCAGCATCGGCTTT GCGTCGCTGCGCGGCGGCAACGTCGTCGGCGATCATCACGTGATCTTCGC CGGGCCGGCGGAGCGGATCGAACTCGTCCACAAGGCGCAGGACCGCATGC TGTTCGCGAGCGGCGCGGTCCACGCGGCGCTGTGGTCGCGCGGCAAGAAG CCGGGGCTTTATTCGATGATGGACGTGTTGGGGCTGGCGGACTTCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11401:3..800+

>mRNA_P-wetherbeei_contig11401.1.1 ID=mRNA_P-wetherbeei_contig11401.1.1|Name=mRNA_P-wetherbeei_contig11401.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig11401:3..800+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGCGCACGCTCGTCAAGGCGATCAGCGAGACGCCGGGCGTGACGCT
CGTTGGCGCTCTGGAGGGCGCGGGCTCGCCGCTCATCGGCCAGGACGCGG
GCGTGCTCGCGGGCTTGCCCGCGAATAACGTCAAGCTCGGCGCTGATGCG
AAGGCCGCGCTGGCCAACGCCGACGCGGTGATCGATTTCACCATCCCGAA
GGCGACCGTGGCCCTCGCTGCACTGATGGCAGGCAAGGTGCATATCATCG
GCACCACTGGGCTTTCGGCGGACGAAGAAGCCAGGATCAAGGACGCGTCG
AAGAACGCCGTGATCGTGAAGTCCGGCAACATGAGCCTCGGCGTCAATCT
GGTCGCGGCGCTCACCAGGCGCGTGGCGAAGGTGCTCGATCAGTCGTTCG
ACATCGAGATCGTCGAGATGCACCACAACAAGAAGATCGATGCGCCGTCC
GGCACCGCGCTGATGTTCGGCCGCGCGGCGGCGGAAGGCCGCGGCATCGA
TCTCGACAAGAACTCCGAACGTGGCCGCGATGGCGAGACCGGCGCGCGCA
AGCCCGGCAGCATCGGCTTTGCGTCGCTGCGCGGCGGCAACGTCGTCGGC
GATCATCACGTGATCTTCGCCGGGCCGGCGGAGCGGATCGAACTCGTCCA
CAAGGCGCAGGACCGCATGCTGTTCGCGAGCGGCGCGGTCCACGCGGCGC
TGTGGTCGCGCGGCAAGAAGCCGGGGCTTTATTCGATGATGGACGTGTTG
GGGCTGGCGGACTTCTAG
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