mRNA_P-wetherbeei_contig1140.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1140.3.1
Unique NamemRNA_P-wetherbeei_contig1140.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A7S2BY64_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BY64_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.070e-46
Identity = 75/119 (63.03%), Postives = 94/119 (78.99%), Query Frame = 1
Query:  172 IWDEDDIHSKDAI--EFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPI 522
            IWDED++ +++AI  E  +D RP P Y+IL+KQ+VMSEDVFLG+G+KTPGS DCTHM ++IQFPG  M DL+LDVT  K+RAESP + LA YLPLPVD  +G AKWD K+  L +TLPI
Sbjct:  122 IWDEDEVPTEEAILVEDMEDARPRPKYEILFKQDVMSEDVFLGMGEKTPGSSDCTHMTIRIQFPGHTMKDLDLDVTTQKLRAESPRMLLAIYLPLPVDSDRGSAKWDTKKEMLIITLPI 240          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A7S2S1L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1L9_9STRA)

HSP 1 Score: 144 bits (362), Expect = 5.450e-40
Identity = 70/123 (56.91%), Postives = 89/123 (72.36%), Query Frame = 1
Query:  172 IWDEDDIHSKDAI--EFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            IWDED++  ++AI  E   DGR  P Y++L+KQ V ++DVFLG GDKTPGS DCTH+V+K  FP   M DL LDVT++KIRAES  + L+ YLPLPVD   G AKWD K+ +L VTLPI + +
Sbjct:   91 IWDEDEVPPEEAILSEEIHDGRQRPRYEVLFKQAVGTQDVFLGTGDKTPGSVDCTHIVIKAVFPSHSMRDLHLDVTKNKIRAESKSMLLSMYLPLPVDPDHGSAKWDAKKESLIVTLPIVRDE 213          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A1W0A327_9STRA (PIH1_CS domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A327_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.160e-39
Identity = 76/178 (42.70%), Postives = 105/178 (58.99%), Query Frame = 1
Query:   22 DLRAFGELLREADEHPENRSAQSV-------VKCTPTVFKHPASQAAVAGPPKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            DL A  +LLR  +++ ++R   S+       V         P  Q  V  P     +IWDED+I S    E   D R  P ++ILYKQ+VM+EDVFLG+GDK P +  C  MVVKIQFPG  +  ++LDV   K+ A+S  ++L+T+LP PV   +G AKWDPK  TL++TLPI + +
Sbjct:    6 DLLALSDLLRPEEDYEDDRKPSSINPSSIAPVSLPIEARDRPIGQIKVKDP----KAIWDEDEITSDGEDEEFGDTRKRPKHEILYKQDVMTEDVFLGLGDKDPSTAHCDAMVVKIQFPGHTLRQIDLDVKHQKLVAQSSTMKLSTFLPYPVKHKEGKAKWDPKTETLSITLPIIREE 179          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A1V9Z3Y0_9STRA (PIH1_CS domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z3Y0_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.540e-39
Identity = 79/184 (42.93%), Postives = 105/184 (57.07%), Query Frame = 1
Query:   19 ADLRAFGELLREADEHPENRSAQSVVKCTPTVFKHPASQAAVAGPP------------KVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            +DL A  +LLR  + H +    +         F  P S A+ A P             K   +IWDED++ S    E   D R  P ++ILYKQ+VM+EDVFLG+GDK P +  C  MVVKI FPG ++ +++LDV   K+ A+S  L+L+TYLP PV   +G AKWDPK  TL VTLPI + D
Sbjct:    5 SDLLALSDLLRSEETHDDEHQRKQA-------FVTPGSIASPALPKGGIIDQGFPLIKKDPKAIWDEDEVGSDAEDEEDSDDRKRPKHEILYKQDVMTEDVFLGLGDKDPSTAHCDAMVVKIVFPGHKLREIDLDVKAQKLVAQSSRLKLSTYLPYPVKHKEGKAKWDPKTDTLIVTLPIVRDD 181          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A482SSY8_9ARCH (PIH1_CS domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SSY8_9ARCH)

HSP 1 Score: 137 bits (346), Expect = 7.310e-38
Identity = 77/180 (42.78%), Postives = 104/180 (57.78%), Query Frame = 1
Query:   22 DLRAFGELLREADEHPENRS----AQSVVKCTPTVFKHPASQAAVAGPPKV--------STSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIF 525
            D+    +LL E+ E  E RS    AQ      PTV K        A  P +        S  IW ED+I ++DA+    D RP P ++I YKQ++ +ED FLG+ DKTP + DCTH+V+KI FPG+ M +L+LDV+ ++I A S   RL TYLP  VD++ G A +D K+  L VTLPI 
Sbjct:    6 DIGNLSKLLAESKEANEFRSGEQFAQKPTATVPTVIKRSQPGDVAAATPSINEKKKNAHSDDIWAEDEIPTEDALLNVRDDRPTPRFEISYKQSIGTEDTFLGLSDKTPLTTDCTHIVIKIHFPGSSMRELDLDVSSNRIMAASRTHRLFTYLPADVDDANGKAAFDSKKEVLTVTLPII 185          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: K3WAM9_GLOUD (PIH1_CS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAM9_GLOUD)

HSP 1 Score: 136 bits (343), Expect = 1.740e-37
Identity = 76/183 (41.53%), Postives = 106/183 (57.92%), Query Frame = 1
Query:   13 DGA-DLRAFGELL---READEHPENRSAQSVVKCTPTVFKHPASQAAVAGP-----PKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            DGA D+ A  EL+   +E  +       + V K TP+     A+   V  P     P    +IW  D++ S D  + A + RP P++DILYKQNVM+ED+FLG+ DK P S  C  MVV+++ P  R  D+ELDV R K+  +S  L+L+ YLP PV    G AKWDPK+ TL ++LPI + +
Sbjct:    2 DGATDILALSELISGQQEMYDEDAYEEQRQVAKLTPSTVGGAANVPKVTRPIGQIRPADPRAIWSLDEVPSDDEGDDAYETRPRPIFDILYKQNVMTEDMFLGLSDKDPSSAHCEAMVVRVKCPNHRQDDIELDVKRQKLLLQSSSLKLSLYLPHPVRHQDGHAKWDPKKQTLTISLPIIRDE 184          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A067C5U1_SAPPC (PIH1_CS domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5U1_SAPPC)

HSP 1 Score: 132 bits (333), Expect = 5.460e-36
Identity = 73/175 (41.71%), Postives = 104/175 (59.43%), Query Frame = 1
Query:   22 DLRAFGELLREADEHPENRSAQSVVKCTP-TVFKHPASQAAVAGP-----PKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQ 528
            DL A  +LLR  ++  ++         TP T+  H   + A+  P      K   +IWD+D++ S    +   D R  P ++ILYKQ+VM+EDVFLG+GDK P +  C  +VVKIQFPG +  +++LDV   K+ A+S  L+L+TYLP PV   +G A+WD K  TL VTLPI +
Sbjct:    6 DLLALSDLLRHDNDADDDERCDKHPSVTPSTIAAHALPRDAMLRPIGQIKQKDPKAIWDDDEVLSDAEDDDDGDARKRPRHEILYKQDVMTEDVFLGLGDKDPSTAHCDAIVVKIQFPGHKRREIDLDVKAQKLVAQSSKLKLSTYLPHPVKYKEGKAQWDGKTETLLVTLPIIR 180          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A6G0WH98_9STRA (PIH1_CS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WH98_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.290e-33
Identity = 72/182 (39.56%), Postives = 101/182 (55.49%), Query Frame = 1
Query:    7 LGDGADLRAFGELLREADEHP----ENR----SAQSVVKCTPTVFKHPASQAAVAGPPKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQ 528
            + D +DL A  +LL+  D+      EN+    +     K        P  Q     P     +IWD D+I S    +   D R  P ++ILYKQ+VM+EDVFLG+GDK P    C  MVVKI FP   + +++LDVT HK+ A+S +L+L+ +LP PV   +G A+WD K  TL VTLP+ +
Sbjct:    1 MSDFSDLMALSDLLKPQDDDVSDPRENKITPYNIHGAAKLPKEAMDRPIGQIVQKDP----KAIWDVDEIASDGEDDEEGDLRSRPKHEILYKQDVMTEDVFLGLGDKDPSVAHCDAMVVKIAFPSHSLNEIDLDVTAHKLVAQSHELKLSIFLPNPVKHKEGKARWDAKSETLFVTLPLIK 178          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A7S1GDH3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDH3_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.570e-33
Identity = 79/192 (41.15%), Postives = 105/192 (54.69%), Query Frame = 1
Query:    7 LGDGADLRAFGELLREADEHPENRSA-------QSVVKCTPTVFKHPAS--QAAVAGPPKVSTSIWD-------EDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            + D   L++  E   +A E  E R+A       ++ +   PT    PA   +   AG       IWD       EDD    D  E A  GR  P YDILYKQ+V +EDVFLG+ D  P S  C  +VVKI+FPG ++ D++LDVT+ +I+A+SP   L+TYLP PV    G AK+D +  TL VTLPI + D
Sbjct:    1 MADILGLQSMIETAEKAAEEREERTAGNAAAKSKTAIVTAPTSLDAPAGGGETKEAGSGGAGKDIWDAAALPTEEDD---DDPAEGA--GRKRPEYDILYKQDVGTEDVFLGLSDVDPSSNSCNFIVVKIKFPGEKLRDIDLDVTQTRIKAQSPTHFLSTYLPYPVKHKDGSAKFDARNSTLVVTLPIIRED 187          
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Match: A0A485KAI7_9STRA (Aste57867_3877 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAI7_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.510e-32
Identity = 69/179 (38.55%), Postives = 96/179 (53.63%), Query Frame = 1
Query:   19 ADLRAFGELLREADEHPENRSAQSVVKCTPTV-------FKHPASQAAVAGPPKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIGDKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPLPVDESKGVAKWDPKRCTLAVTLPIFQTD 534
            +DL A  +LL+  D+      A  V  C+ T           P  Q     P     SIW  D++ S D  E  D  R  P ++IL+KQ+VM+ED+FLG+GDK P    C  MV+KI FPG  + +++LD    K+ A+S  L+L+ +LP PV   +G AKWD K   L VTLPI + +
Sbjct:    5 SDLLALSDLLKPNDDGESYNDAPKVTPCSITAGSLPKEAINRPIGQIVQEDP----KSIWSNDEVKSDDEDEEGDT-RKRPKHEILFKQDVMTEDIFLGLGDKDPSVAHCDAMVIKIAFPGHVLQEIDLDFKSQKLIAQSHKLKLSIFLPNPVKHKEGKAKWDSKIGALVVTLPILKDE 178          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1140.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2BY64_9STRA3.070e-4663.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2S1L9_9STRA5.450e-4056.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1W0A327_9STRA1.160e-3942.70PIH1_CS domain-containing protein n=1 Tax=Thrausto... [more]
A0A1V9Z3Y0_9STRA2.540e-3942.93PIH1_CS domain-containing protein n=1 Tax=Achlya h... [more]
A0A482SSY8_9ARCH7.310e-3842.78PIH1_CS domain-containing protein n=1 Tax=archaeon... [more]
K3WAM9_GLOUD1.740e-3741.53PIH1_CS domain-containing protein n=1 Tax=Globispo... [more]
A0A067C5U1_SAPPC5.460e-3641.71PIH1_CS domain-containing protein n=2 Tax=Saproleg... [more]
A0A6G0WH98_9STRA1.290e-3339.56PIH1_CS domain-containing protein n=1 Tax=Aphanomy... [more]
A0A7S1GDH3_9STRA1.570e-3341.15Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A485KAI7_9STRA5.510e-3238.55Aste57867_3877 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1140contigP-wetherbeei_contig1140:5340..6170 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T002020
PFAMsPIH1
Model size540
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.86e-38
EggNOG OGs2CJGJ@1|root,2RUY1@2759|Eukaryota,1MI0I@121069|Pythiales
Descriptionflagellated sperm motility
Cds size540
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185910.214116-CDS-P-wetherbeei_contig1140:5339..55811683185910.214116-CDS-P-wetherbeei_contig1140:5339..5581Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1140 5340..5581 +
1683185910.2224283-CDS-P-wetherbeei_contig1140:5685..58681683185910.2224283-CDS-P-wetherbeei_contig1140:5685..5868Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1140 5686..5868 +
1683185910.229937-CDS-P-wetherbeei_contig1140:6055..61701683185910.229937-CDS-P-wetherbeei_contig1140:6055..6170Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1140 6056..6170 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1140.3.1prot_P-wetherbeei_contig1140.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1140 5340..6170 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1140.3.1

>prot_P-wetherbeei_contig1140.3.1 ID=prot_P-wetherbeei_contig1140.3.1|Name=mRNA_P-wetherbeei_contig1140.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=180bp
MDLGDGADLRAFGELLREADEHPENRSAQSVVKCTPTVFKHPASQAAVAG
PPKVSTSIWDEDDIHSKDAIEFADDGRPAPLYDILYKQNVMSEDVFLGIG
DKTPGSKDCTHMVVKIQFPGARMADLELDVTRHKIRAESPDLRLATYLPL
PVDESKGVAKWDPKRCTLAVTLPIFQTDS*
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mRNA from alignment at P-wetherbeei_contig1140:5340..6170+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1140.3.1 ID=mRNA_P-wetherbeei_contig1140.3.1|Name=mRNA_P-wetherbeei_contig1140.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=831bp|location=Sequence derived from alignment at P-wetherbeei_contig1140:5340..6170+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTGGGTGATGGAGCGGATCTTCGAGCTTTCGGCGAGCTGCTGCG TGAGGCGGATGAGCACCCCGAGAACCGTTCAGCACAGAGTGTCGTCAAAT GCACACCTACCGTTTTCAAGCACCCAGCATCGCAAGCTGCAGTTGCAGGG CCACCGAAGGTCTCCACCTCTATTTGGGACGAGGACGACATCCACTCGAA AGACGCGATCGAATTCGCGGACGACGGTCGACCGGCCCCGTTGTAAGTGA CGCTTGCGCTTCCTCGGCCTTTTCCAGGCCCCAGCTTTTTCAAATAAACG GCTTTCTATGTGCTACACTTGGGAACTTTGGAATACATTTGTCCAGGTAT GACATCTTGTACAAACAAAATGTAATGTCTGAGGACGTGTTCCTCGGAAT CGGCGACAAGACGCCGGGGTCGAAGGACTGCACGCATATGGTTGTGAAGA TTCAGTTTCCTGGCGCGAGGATGGCCGACCTCGAGCTCGACGTCACCCGC CACAAGATCCGCGCCGAATCACCCGACCTGTAAGCGCGAAACGCGATGTT CTCTATGTTCTTTCTTTTGCAGCTGTTGCTGCTCTTTTGGGGCAGTGACG CGAGCCAAGTGTACGTGCCATCGCCTTGATTTTGCGAGTTAGTAGACAAA TTTACTTCTCCCCTGCTGCATATATTTCAAAGCGCTCGTATTCGCGGTAC TCTTCCCGTCACGCAGGCGACTGGCCACGTATCTGCCGCTACCGGTGGAC GAATCGAAAGGTGTAGCGAAATGGGATCCGAAGCGCTGCACGCTGGCGGT AACTCTGCCTATTTTTCAAACAGACTCATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1140:5340..6170+

>mRNA_P-wetherbeei_contig1140.3.1 ID=mRNA_P-wetherbeei_contig1140.3.1|Name=mRNA_P-wetherbeei_contig1140.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=540bp|location=Sequence derived from alignment at P-wetherbeei_contig1140:5340..6170+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTGGGTGATGGAGCGGATCTTCGAGCTTTCGGCGAGCTGCTGCG
TGAGGCGGATGAGCACCCCGAGAACCGTTCAGCACAGAGTGTCGTCAAAT
GCACACCTACCGTTTTCAAGCACCCAGCATCGCAAGCTGCAGTTGCAGGG
CCACCGAAGGTCTCCACCTCTATTTGGGACGAGGACGACATCCACTCGAA
AGACGCGATCGAATTCGCGGACGACGGTCGACCGGCCCCGTTGTATGACA
TCTTGTACAAACAAAATGTAATGTCTGAGGACGTGTTCCTCGGAATCGGC
GACAAGACGCCGGGGTCGAAGGACTGCACGCATATGGTTGTGAAGATTCA
GTTTCCTGGCGCGAGGATGGCCGACCTCGAGCTCGACGTCACCCGCCACA
AGATCCGCGCCGAATCACCCGACCTGCGACTGGCCACGTATCTGCCGCTA
CCGGTGGACGAATCGAAAGGTGTAGCGAAATGGGATCCGAAGCGCTGCAC
GCTGGCGGTAACTCTGCCTATTTTTCAAACAGACTCATGA
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