mRNA_P-wetherbeei_contig114.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A835Z8Y7_9STRA (Tic22-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y7_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.300e-49 Identity = 106/288 (36.81%), Postives = 169/288 (58.68%), Query Frame = 2 Query: 260 PKLQRKVQANILKGLISFAAFTLGAPVIGGAVRTHHGGDG---AAVRAGVAEAGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAP-AKPMGGARGGRGGGADTLKYVFHPSVAGRERAAGLGLADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGGEYADFGFFPPTASMKFVSAVKKGGGSTARIPAPSYEY 1111 P+ + +++ + + FA T GAP + +R+ H G + V AEA + K+F++RTLKEKL+NVP F +V+R G YL + Q + +T EDA +M EMLQSP L G R+L++ LDKA++++ P A M G +T+++ FH +V RE+ + D + VPV+YA G+ +V+ GV VKP+F D ++L DAWF+A + +P+MPR P ++V++LPE++L ME ++ DFGF P +S++ + V+ G+ AR + Y Sbjct: 12 PQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVF-KKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETG-GQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQP----ETIEFRFHEAVHPREKMELYRVQDK-QGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY 292
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: D7FZH1_ECTSI (Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH1_ECTSI) HSP 1 Score: 183 bits (465), Expect = 1.650e-48 Identity = 110/283 (38.87%), Postives = 167/283 (59.01%), Query Frame = 2 Query: 287 NILKGLISFAAFTLGAPVIGG-AVRTHH---GGDGAAVRAGV------AEAGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVFHPSVAGRERAAGLGL--ADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGGEYADFGFFPPTASMKFVSAVKKGGGSTARIPAP 1099 ++ +G S A FT+GA + G + H DGAAV + AEA +L + F+KRT++EKL+N+P FMV +++G PYL+P+ + QMAV +T V+DA+EM EM+Q + + R+LV+S++KAY +V A K G G + + + P + ++A LGL + A ++ VPV+Y EG++V R+G VKPLF+D DL +AW +A NP MP P+V+VF++P+VI+ ME E+ FGFF T +F+ + AR P P Sbjct: 106 SLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVL-RPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTEPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTGYQNDE--GVDERMDFKLEPDMHSFQKARRLGLDVSPAAANIDVPVFYVEGLEVKRDGGLVKPLFMDPADLVEAWKKAAASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQARD-----ARKPFP 379
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR) HSP 1 Score: 128 bits (321), Expect = 7.940e-30 Identity = 84/236 (35.59%), Postives = 119/236 (50.42%), Query Frame = 2 Query: 398 VAEAGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVFHPSVAGRERAAGLGLADAVRD----VPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGG-EYADFGFFPPTASMKFVSAVKKGGGSTARI 1090 VA +F K+T+ EKLS VPVF V + GQPYL SQ+ +I+ DA M +M ++P RV +M LDKAY +V A +P G RG + L VF ++ A GL +R +PV+ A+G+ + + V PLFL DL AW + R N +P N SV V +L +I +ME G E + GFF P AS+++V+ + G AR+ Sbjct: 12 VAAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGA-SDARVYIMGLDKAYEMVKAKPQPSGI----RGAAGEELTMVFRFFPDSKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTGQARM 242
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A7S3A3T2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3T2_9RHOD) HSP 1 Score: 117 bits (293), Expect = 1.770e-25 Identity = 79/285 (27.72%), Postives = 139/285 (48.77%), Query Frame = 2 Query: 239 TPMRMTGPKLQRKVQANILKGLISFAAFTLGAPVIGGAVRTHHGGDGAAVRAGVAEAGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVFHPSVAGRERAAG-LGLADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGGEYADFGFFPPTASMKFVSAVKKGGGSTARI 1090 T +RM+ K IL GL+ A ++GG+ T+ +R E+ + + +++ KL+ VPVF++ S GQPYL + + Q+ +I+ +EDA ++ +M + + R+ ++LDKA +V A P G +GG + + +P A + A LG + +P++ A G+ V + V+P+F DL W R R ENP +PR P++ V+SL +++ +ME +GF+PP+ S+ F+ K+ R+ Sbjct: 30 TVVRMSEDGGHGKTGRRILAGLLGGAV-----ALLGGSAGTNE-----LLRFPQVESALAGTLYKNKSIVGKLAQVPVFLITSAGGQPYLA-TLEESRQVGLIFFSIEDATKVMEQMKMNAGAE-EARIFPLTLDKAMEMVKAKPTPSG--LKSQGGQDLMMVFRLYPDTAQVKNAGSVLGRRQGASNT-IPLFVARGLVVRKGREEVQPMFFTKEDLESNWNRLRSENPKLPRRPNIEVYSLQDIVEKMENGDEALRGWGFYPPSRSVSFMEEQKEKKSGKTRM 299
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD) HSP 1 Score: 115 bits (287), Expect = 3.450e-24 Identity = 87/241 (36.10%), Postives = 131/241 (54.36%), Query Frame = 2 Query: 425 RFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQ-CRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVF--HPSVAGRERAAGLGLADAVRDVP-VPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGG--------EYADF---GFFPPTASMKFVS--AVKKGGGSTARIPA 1096 R+ ++TL EKL+ VPVF V + GQP+L + +Q+ +I+ DA +M ++ +S + R+ VM LD+A+ +V + +P G RG RG D LK VF +P+ E A L V VP + A+G+ + + V P+FLD RDL DAW R R++ +P++P V V L EVILR+EEA E D FFP + S++F+ ++K+ G TAR+ A Sbjct: 134 RYSRKTLDEKLAQVPVFAVTNESGQPFLA-AMERGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSG-LRGPRG---DELKMVFRFYPNQQQVEHARSLARKTKQPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMKQESMKQFKG-TARMHA 368
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1URJ3_CYAM1) HSP 1 Score: 110 bits (275), Expect = 1.150e-22 Identity = 78/224 (34.82%), Postives = 120/224 (53.57%), Query Frame = 2 Query: 425 RFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQ-CRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVF--HPSVAGRERAAGLGLADAVRDVP-VPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGG--------EYADF---GFFPPTASMKFV 1051 R+ ++TL EKL+ VPVF V + GQP+L + Q+ +I+ +DA +M ++ +S + R+ +M LD+A+ +V + +P G RG RG D LK VF +P+ E A + V VP + A+G+ + + V P+FLD RDL +AW R R+E +P+ P + V L EVILR+EEA E D FFP + S++F+ Sbjct: 126 RYSRKTLSEKLAQVPVFAVTNESGQPFLA-AMERGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSG-LRGPRG---DELKMVFRFYPNQQQLEYARTVAKKTKQPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFM 344
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A6H5L2Q1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q1_9PHAE) HSP 1 Score: 101 bits (252), Expect = 1.500e-20 Identity = 59/147 (40.14%), Postives = 92/147 (62.59%), Query Frame = 2 Query: 275 KVQANILKGLISFAAFTLGAPVIGG-AVRTHH---GGDGAAVRAGV------AEAGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAPAKPMG 685 + + ++ +G S A FT+GA + G + H DGAAV + AEA +L + F+KRT++EKL+N+P FMV +++G PYL+P+ + QMAV +T V+DA+EM EM+Q + + R+LV+S++KAY +V A K G Sbjct: 102 RARRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVL-RPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTKPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTG 247
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A6H5L2U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U4_9PHAE) HSP 1 Score: 97.1 bits (240), Expect = 7.820e-20 Identity = 50/130 (38.46%), Postives = 76/130 (58.46%), Query Frame = 2 Query: 716 DTLKYVFHPSVAGRERAAGLGL--ADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGGEYADFGFFPPTASMKFVSAVKKGGGSTARIPAP 1099 + + + P + ++A LGL + A + +PV+YAEG++V R+G VKPLF+D DL +AW +A NP MP P+V+VF++P+VI+ ME E+ FGFF T +F+ + AR P P Sbjct: 29 EMMDFKLEPDMHSFQKARRLGLDVSPAAANTDIPVFYAEGLEVKRDGGLVKPLFMDPADLVEAWKKATASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQARD-----ARRPFP 152
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: M2XY72_GALSU (Chloroplast inner membrane import protein Tic22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY72_GALSU) HSP 1 Score: 96.3 bits (238), Expect = 5.130e-18 Identity = 66/218 (30.28%), Postives = 107/218 (49.08%), Query Frame = 2 Query: 407 AGILTKRFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLVSAPAKPMGGARGGRGGGADTLKYVFH--PSVAGRERAAGLGLADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPSVRVFSLPEVILRMEEAGG-EYADFGFFPPTASMKFV 1051 A L+KR + LKE+ NV V+MV ++ GQP+L ++Q+ + + DA M +M Q G R+ +SLDKAY++V+A P G + +G LK VF P V L ++R VPV + A + + +N + P FLD DL +W ++ +P +P P + L +V+ ME+ + GF+ P ++ +V Sbjct: 109 ASSLSKRRARELLKERTKNVKVYMVANQAGQPFLAEGVESNTQVGLFFFTAADASMMLMQMSQGA--GGSARIEAISLDKAYDMVTAKPTPSG-LKDTKG---RDLKVVFRFCPEVYQVRFYRQLAKNKSLRSVPV--FVAPDLVLEKNNENLIPAFLDKEDLEKSWKELKKTHPELPLRPKIEAVDLLDVLEEMEKGTNPDIYQLGFYAPRKNLVWV 318
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Match: A0A0G4HBD1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HBD1_9ALVE) HSP 1 Score: 73.2 bits (178), Expect = 1.470e-10 Identity = 67/251 (26.69%), Postives = 102/251 (40.64%), Query Frame = 2 Query: 425 RFDKRTLKEKLSNVPVFMVVSREGQPYLTPSPSDDSQMAVIYTCVEDAEEMTSEMLQSPYLRGQCRVLVMSLDKAYNLV---------------SAPAKPMGGARGGRGGGADTLKYVFHPSVAGRERAAGLGLADAVRDVPVPVYYAEGIQVVRNGVPVKPLFLDSRDLFDAWFRARRENPSMPRNPS------VRVFSLPEVIL---RMEEAGGEY----ADFGFFPPTASMKFVSAVKKGGGSTARIP 1093 ++ R EKL VPVF++ + G PYL P+ D V + DAEE ++ L S RV VM L++ + V + GG R GR + L + S A ++ A + VPV+ E +++ R + PLF+D D AW R + NPS+P V+ S EV+ R +E E +G P + + +V + G AR+P Sbjct: 33 KYSNRPFTEKLVGVPVFLMTTTHGAPYLYPN--GDMSEIVCFLDPSDAEEKITDALMSQK-NLDARVCVMGLERIWKNVYPSVLQQKQAAEEEGGQTKRGRGGRRRGRRAQSRDLIWTLRGSSAQKQYIAKTFNRKDRNKIDVPVFRVETLRMKRGSEWIMPLFMDYDDARLAWDRLKALNPSLPSRGKIYAHDLVKFLSEREVLTERARKKEISPELYRIQGAWGIVPSSKAKAYVKTATERGARKARLP 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig114.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig114.2.1 >prot_P-wetherbeei_contig114.2.1 ID=prot_P-wetherbeei_contig114.2.1|Name=mRNA_P-wetherbeei_contig114.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=361bp MAPCTLPAAALVAMLLAGASDAFSGSVLLRRSHITADQRLRRTRFHAAGSback to top mRNA from alignment at P-wetherbeei_contig114:11226..13054- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig114.2.1 ID=mRNA_P-wetherbeei_contig114.2.1|Name=mRNA_P-wetherbeei_contig114.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1829bp|location=Sequence derived from alignment at P-wetherbeei_contig114:11226..13054- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig114:11226..13054- >mRNA_P-wetherbeei_contig114.2.1 ID=mRNA_P-wetherbeei_contig114.2.1|Name=mRNA_P-wetherbeei_contig114.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1083bp|location=Sequence derived from alignment at P-wetherbeei_contig114:11226..13054- (Phaeothamnion wetherbeei SAG_119_79)back to top |