mRNA_P-wetherbeei_contig11395.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A6H5K2G8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2G8_9PHAE) HSP 1 Score: 145 bits (367), Expect = 3.070e-41 Identity = 68/130 (52.31%), Postives = 96/130 (73.85%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFLV 390 VVLFDG C FC+SGVW+M+ +S+ +RF Q+S++G+SLL + G D +RLSSIA+++ +G L+TRS A++ I RMDFPFP+ AA VP PLR+AVYG++S RH + CRIPEE ++ERF++ Sbjct: 106 VVLFDGECNFCNSGVWMMISNSEARNLRFCAQNSEMGVSLLHSFGQDQERLSSIAILDKDGHLYTRSCALVHIMARMDFPFPVGAALLKAVPEPLRDAVYGFVSRRRHMFGTESLSCRIPEESEVERFVL 235
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: D7FYZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ6_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.740e-30 Identity = 54/114 (47.37%), Postives = 82/114 (71.93%), Query Frame = 1 Query: 49 LMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFLV 390 +M+ +S+ +RF Q+S++G+SLL + G D +RLSSIA+++ +G L+TRS A++ I RMDFPFP+ AA VP P+R+AVYG++S RH + CRIPEE ++ERF++ Sbjct: 1 MMISNSEARNLRFCAQNSEMGVSLLHSFGQDQERLSSIAILDKDGHLYTRSCALVHIMARMDFPFPVGAALLKAVPEPVRDAVYGFVSRRRHVFGTESLSCRIPEESEVERFVL 114
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A836CDU0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU0_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.280e-28 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 52 MLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFLVD 393 +L HS +RFA Q SD GL +L G++P L SIA+++ +GKL T+S AVL+IARRM PFP LA + +P P R+A+Y W+S R D CRIPE+++M RFL + Sbjct: 1 VLAHSDADKLRFAAQQSDTGLEILKLFGMEPGELRSIAVLQRSGKLLTQSAAVLEIARRMYQPFPALAEVCSAIPEPARDALYAWVSTQRGVF-GHADSCRIPEDEEMARFLTE 113
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A4D9CNA7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNA7_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.180e-27 Identity = 61/132 (46.21%), Postives = 83/132 (62.88%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLML--EHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVV-PLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFL 387 V+LFDG C FCS V L + + A RFA+ +IG LL A GLD + ++I L++ + ++ T SDAVL+IA R+ PFP LA A V+ P R+A+Y ++S NRH L D CRIP E++MERFL Sbjct: 40 VILFDGDCGFCSDVVNLFINFDGDPRGAFRFASLQGEIGQELLTANGLDTEHFNTIVLVDKD-EVFTSSDAVLEIADRLKEPFPQLARLAKVLLPHVFRDALYSFVSSNRHLLAGEKDSCRIPSENEMERFL 170
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A2K3CY30_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3CY30_CHLRE) HSP 1 Score: 103 bits (257), Expect = 8.370e-25 Identity = 53/130 (40.77%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFLV 390 V+LFDG C C++GV ML++ R A S G LL CG PD +SSI L+E + + RS+A+L+I ++ P PLLAA VPLPLR+A Y ++ NR+ TD CR+ + +RF++ Sbjct: 99 VILFDGVCNLCNNGVNFMLDNDPSGVYRLAALQSPAGRRLLQRCGRSPDDISSIVLVERDSH-YIRSEAILRIGWKLRVPLPLLAAFGFPVPLPLRDAFYDSVANNRYNFFGRTDSCRVDDGRFKDRFII 227
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A150GM63_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GM63_GONPE) HSP 1 Score: 103 bits (256), Expect = 1.180e-24 Identity = 56/132 (42.42%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQM-ERFLVD 393 V+L+DG C C+ GV ML++ A R A S G LL CG PD LSSI L+ H RS+A+L+I + P PLLAA VPLPLR+A Y ++ NR++ TD CR+ + + +RF+VD Sbjct: 98 VILYDGVCGLCNRGVNFMLDNDPGGAFRLAALQSPAGRRLLSRCGRRPDDLSSIVLVTPTAH-HIRSEAILRIGVALRVPLPLLAAFGFPVPLPLRDAFYDAVANNRYSFFGRTDSCRLRDAGKFADRFIVD 228
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A061SEC8_9CHLO (Duf393-domain-containing protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEC8_9CHLO) HSP 1 Score: 101 bits (251), Expect = 6.130e-24 Identity = 47/121 (38.84%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPE 363 +VLFDG C C+SGV L+ K +R+A S +G SLL CG +PD +SSI L++ + + +S+AVL+I ++++ P P+L A +PL R+AVY +++ NR+++ T+ CR+ + Sbjct: 101 IVLFDGECNMCNSGVTFCLDWDKVGVLRYAALQSQVGRSLLQRCGREPDDISSIVLVDKD-TCYIKSEAVLRIGQKLEMPLPVLTTFAFPLPLIFRDAVYDFVAANRYSVFGRTNSCRLSD 220
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: UPI000BA67397 (thiol-disulfide oxidoreductase DCC family protein n=1 Tax=Terribacillus saccharophilus TaxID=361277 RepID=UPI000BA67397) HSP 1 Score: 98.2 bits (243), Expect = 9.190e-24 Identity = 50/129 (38.76%), Postives = 83/129 (64.34%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFL 387 ++LFDG C C++ V +++H K + +FA+ SD G L A + P + SI L+E NGK++ +S A+L+I+R ++ P+ L AAAA ++P PLR+ +Y ++++NR+ D+C +P D ERFL Sbjct: 6 IILFDGVCNLCNNSVQFIIKHDKAAYFKFASLQSDFGGQLKEAKQI-PGHVDSIILVE-NGKVYMQSSAILRISRHLNGPWKL-AAAALIIPRPLRDGLYRYVAKNRYRWFGRQDQCMLPSPDLKERFL 131
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: A0A8J4AQG0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AQG0_9CHLO) HSP 1 Score: 100 bits (248), Expect = 2.800e-23 Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQM-ERFLVD 393 ++LFDG C C+ GV ML++ R A S G LL CG P+ +SSI L+E + + RS+A+L+I + P PLLAA VPLPLR+A Y I+ NR++ TD CR+ + +RF+VD Sbjct: 118 IILFDGVCNLCNGGVNFMLDNDPNGVFRLAALQSQAGRRLLTRCGRSPNDISSIVLVEKD-RHFIRSEAILRIGAALRVPLPLLAALGFPVPLPLRDAFYDAIANNRYSFFGRTDTCRLRDAGNFADRFIVD 248
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Match: UPI00201D7FE8 (thiol-disulfide oxidoreductase DCC family protein n=1 Tax=Paenibacillus sp. PK3_47 TaxID=2072642 RepID=UPI00201D7FE8) HSP 1 Score: 97.1 bits (240), Expect = 3.240e-23 Identity = 54/129 (41.86%), Postives = 79/129 (61.24%), Query Frame = 1 Query: 1 VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRLSSIALMESNGKLHTRSDAVLQIARRMDFPFPLLAAAAAVVPLPLREAVYGWISENRHTLVAPTDECRIPEEDQMERFL 387 VVL DG C C V ++ + +RFA S+ GL L + GLD +LS++ L+E NG ++T S AVL+IARR+ FP+PL A +VP PLR+AVY ++++NR+ ++C +P D RFL Sbjct: 13 VVLIDGVCHLCQGLVRFIIPRDPKARLRFAPLQSETGLRLQQSYGLDSGQLSTVVLLE-NGTVYTESAAVLRIARRLRFPWPL-AYLFILVPGPLRDAVYRYVAKNRYRWFGRDEQCLMPTPDIRRRFL 139 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11395.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11395.1.1 >prot_P-wetherbeei_contig11395.1.1 ID=prot_P-wetherbeei_contig11395.1.1|Name=mRNA_P-wetherbeei_contig11395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp VVLFDGSCAFCSSGVWLMLEHSKPSAMRFATQSSDIGLSLLGACGLDPDRback to top mRNA from alignment at P-wetherbeei_contig11395:150..755- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11395.1.1 ID=mRNA_P-wetherbeei_contig11395.1.1|Name=mRNA_P-wetherbeei_contig11395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=606bp|location=Sequence derived from alignment at P-wetherbeei_contig11395:150..755- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11395:150..755- >mRNA_P-wetherbeei_contig11395.1.1 ID=mRNA_P-wetherbeei_contig11395.1.1|Name=mRNA_P-wetherbeei_contig11395.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig11395:150..755- (Phaeothamnion wetherbeei SAG_119_79)back to top |