mRNA_P-wetherbeei_contig11387.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11387.1.1
Unique NamemRNA_P-wetherbeei_contig11387.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A835Z0A0_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0A0_9STRA)

HSP 1 Score: 192 bits (487), Expect = 4.860e-56
Identity = 92/162 (56.79%), Postives = 112/162 (69.14%), Query Frame = 1
Query:   40 QVVYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRLQNV-VGGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGDETRVESLLSWLRHCPETRIAVVCHWGFI 522
            +VV F+RHGQS+ANT+           +RDS LT KG+SQA  LQ   V     Q+I+SSPLTR LQTACLAFEN   PI+AWP  TEF+PE PEC GR + +LE + +LT L ++  VHL NVV +WW  AGD  R++  L+WLR CPETRI VVCHWGFI
Sbjct:   22 KVVVFVRHGQSIANTLAEGMKMDLSQEVRDSRLTAKGESQAAALQGKWVASCKPQIILSSPLTRALQTACLAFENLPLPIVAWPCCTEFYPEYPECQGRQREQLEAEPKLTGLKKWKDVHLGNVVGDWWSIAGDLGRLDVFLAWLRWCPETRIVVVCHWGFI 183          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: F2UDE0_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UDE0_SALR5)

HSP 1 Score: 183 bits (464), Expect = 5.890e-52
Identity = 89/180 (49.44%), Postives = 113/180 (62.78%), Query Frame = 1
Query:    1 EHHHNATTLPTL-----SQVVYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRLQNVVGGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGDET-RVESLLSWLRHCPETRIAVVCHWGFI 522
            +HHH   +LP        +VVYF+RHGQS AN      +    P  RD+PLT  G  QA  LQ+ V    VQ +  SPLTR +QTAC+AF  E  PI AWP++TEF+P++PEC GRN+ +L+    L++L RF  V LD V D WW  AGD   R+ +  +WL  CPETRIA+VCHWGFI
Sbjct:   17 DHHHGEDSLPDDVKQGGHKVVYFVRHGQSEANVASDNNH----PDFRDAPLTRIGHEQAMGLQSAVKKWGVQTVYCSPLTRAIQTACIAFAEEKCPIYAWPVITEFYPDMPECQGRNRQDLKSCLMLSALSRFDDVRLDGVADNWWHIAGDRVGRLRTFFNWLSVCPETRIAIVCHWGFI 192          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A0L0F2Q8_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0F2Q8_9EUKA)

HSP 1 Score: 147 bits (371), Expect = 5.530e-43
Identity = 62/95 (65.26%), Postives = 76/95 (80.00%), Query Frame = 1
Query:  238 TACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGDETRVESLLSWLRHCPETRIAVVCHWGFI 522
            TAC AFEN   P++ WP VTEF+PE+ EC GR+K  ++K  +LT+LPRF  VHL+NVV +WW  +GDETR++S LSWLR CPETRIAVVCHWGFI
Sbjct:    1 TACHAFENTCHPVVVWPTVTEFYPEMQECVGRSKEAIQKCPKLTTLPRFRTVHLENVVGDWWDISGDETRLDSFLSWLRFCPETRIAVVCHWGFI 95          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A6U5YVT9_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A6U5YVT9_GUITH)

HSP 1 Score: 88.2 bits (217), Expect = 5.920e-18
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 1
Query:   46 VYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRLQNVVGGLDVQLIISSPLTRTLQTACLAFENE--STPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVD-EWWG--------CAGDETRVESLLSWLRHCPETRIAVVCHWGFI 522
            +  IRHG S+ANT         D    D+ L+  G+ QA  L  V+      LI+SSP+ R +QT  LA E    S PI+  P   E   E  E  GR   ++ +D        + +V+L  + D  WW           G + +  SL+SWL+H  E +IAV  HWG +
Sbjct:   65 ILLIRHGLSVANTQKDVFFGSCDERFIDAGLSPVGRRQAEALSPVLEAFKPDLILSSPMRRAIQTCMLALEGSPSSPPIVLHPTAMECAGEGHENEGRVVEQISQDVEFQCFAHWRKVNLQEMPDGAWWEEERERIKQAGGRKAQARSLVSWLKHRSERKIAVFTHWGLV 234          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A0G4GGU6_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGU6_VITBC)

HSP 1 Score: 79.3 bits (194), Expect = 8.320e-15
Identity = 52/162 (32.10%), Postives = 74/162 (45.68%), Query Frame = 1
Query:   46 VYFIRHGQSLANTVWGEGNAK--------FDPSLRDSPLTEKGKSQARRLQNVV------GGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGDETRVESLLSWLRHCPET 489
            VY IRHGQS  N    E   K        +DP + D+PLTE+ + Q R L  V+      G L++  I SSPL+R++ TA +AFE    P++  PL+ E      +C       L + E     P +   H     +EWW   GD +   +    + H P T
Sbjct:   37 VYLIRHGQSEYNKWRRESFTKLRWRDMITYDPEIYDAPLTERARDQIRNLSQVLNASLEAGRLEIDAIYSSPLSRSIDTAAMAFEGSDKPLLLHPLLRE------KCETTGDIGLPRSELQRRHPHWDFTHFHEHDEEWWH-KGDPSAPLAFFRKIPHEPST 191          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: UPI000DDB0F76 (phosphoglycerate mutase family protein n=1 Tax=Microvirga flavescens TaxID=2249811 RepID=UPI000DDB0F76)

HSP 1 Score: 75.9 bits (185), Expect = 5.660e-14
Identity = 64/179 (35.75%), Postives = 83/179 (46.37%), Query Frame = 1
Query:   34 LSQVVYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRLQNVVGGLDVQLIISSPLTRTLQTACLAFENE--STPIIAWPLVTEFFPELPECH-GRNKHELEKDERLTSLPRFGQVHLDNVVDEWW--GCAGDET------------RVESLLSWLRHCPETRIAVVCHWGF 519
            + ++V+ IRHGQS  N  + E     DP   D+PLT+ G +QA     +  G   +L+++SPLTR LQT    F N   + PI+   L  E+   L  C  GR    L +D      P F   HLD V   WW    + DE             RV+S  SWL   PE  IAVV H  F
Sbjct:    1 MPKIVHCIRHGQSTFNARYDETGE--DPLFFDAPLTDLGHTQAADAAALHRGFAYELVVTSPLTRALQTTRGIFGNHPVAPPIVVESLHREYL--LSSCDVGREPVHLARD-----FPDFAFAHLDEV---WWHRDDSPDERGLSVEPLDHLAERVKSFRSWLSARPEGLIAVVGHGTF 167          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A8J5XM83_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM83_DIALT)

HSP 1 Score: 78.2 bits (191), Expect = 7.870e-14
Identity = 60/179 (33.52%), Postives = 84/179 (46.93%), Query Frame = 1
Query:   40 QVVYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRL---QNVVGGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPR-FGQVHLDNVVDEWW----------------GCAGDETRVESLLSWLRHCPETRIAVVCHWG 516
            +VVY IRHGQ+       E N   D ++RD PLTE+G++QA  L     V+ G  V+L+++SP+ RTL+TA +AF ++ T     PL    F   P+      H  +       L R FG+  L    D W+                GC     R+E L +WL    E  IA+V H G
Sbjct:   16 KVVYLIRHGQA-------EHNVSGDLTIRDPPLTEQGRAQAAGLLASAPVLHGRTVELVVASPMRRTLETARIAFASQHTR----PL----FVAHPDAQETGTHPSDTGSDADVLGREFGEFDLSMCADGWYVKASPYDSRTRERHAAGCDALRARLERLGAWLLARSEKSIALVAHHG 179          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A6U4XGG1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4XGG1_HEMAN)

HSP 1 Score: 75.9 bits (185), Expect = 2.280e-13
Identity = 62/181 (34.25%), Postives = 89/181 (49.17%), Query Frame = 1
Query:   37 SQVVYFIRHGQSLANTVWGEGNAKF------DPSLRDSPLTEKGKSQARRLQNVV--GGLDVQLIISSPLTRTLQTACLAF--ENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSL--PRFGQVHLDNVVDE----WWGCAGDE---TRVESLLSWLRHCPETRIAVVCHWGFI 522
            S++V+F+RH + L N    +   +F         + D+PLT++G++Q   L+ V+   G+DV LI+ SPLTRTLQTA L+F   +  TP IA  L          C  R      +    TS+   RF QV    V +E    +     DE    R +  + WL   PE+RIAVV H  F+
Sbjct:   68 SKLVHFVRHAEGLHNAAHRDREEEFWKTLFNSDEMWDAPLTKEGEAQCAGLEEVILSEGIDVDLIVVSPLTRTLQTAQLSFGKTHPKTPAIAHEL----------CRERIAVYTSEGRTDTSVVAQRFPQVDFSLVTNEKDTMFQHKEKDEDVGARAKLFVEWLMARPESRIAVVSHSVFL 238          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: UPI0019F8EB2C (Histidine phosphatase family protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019F8EB2C)

HSP 1 Score: 73.6 bits (179), Expect = 3.860e-13
Identity = 48/126 (38.10%), Postives = 65/126 (51.59%), Query Frame = 1
Query:   46 VYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKGKSQARRLQNVVGGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWW 423
            +YFIRHGQS  N  + EG+   DP + D+PLT+KG+ QA   +  V  L ++ +I+SPLTR +QTA   F+  S PI       E      +  GR    L++D      P     HL NV   WW
Sbjct:    3 IYFIRHGQSEFNAAFNEGDN--DPMIFDAPLTDKGRGQAEDARLRVADLGIKHVITSPLTRAIQTALCIFDG-SAPIAVGADHRELLTHSCDV-GRAPEALQRD-----FPSLSFAHLQNV---WW 116          
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Match: A0A1Y1I690_KLENI (Phosphoglycerate mutase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I690_KLENI)

HSP 1 Score: 73.2 bits (178), Expect = 8.620e-13
Identity = 52/177 (29.38%), Postives = 78/177 (44.07%), Query Frame = 1
Query:   40 QVVYFIRHGQSLANTVWGEGNAKF-DPSLRDSPLTEKGKSQARRLQNVVGGLD-VQLIISSPLTRTLQTACLAFENESTPIIAWPLVTEFFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGD--------------ETRVESLLSWLRHCPETRIAVVCHWGFI 522
            +V++ +RHG +  N   G     F DP + D+ LT +G+ QA+ +   V  L  + LI++SPLTR + T  LAF     P +   L  E      +  GR+ ++L        L  +  +   ++ D WW   G                 RV +   WL   PE  IAVV HWG +
Sbjct:   12 KVLHLVRHGVTEMNVFLGSAPQGFTDPLMYDTRLTPEGREQAKSVNKKVAELGPIDLIVTSPLTRAMDTMQLAFAGVDAPKVVCELARERLWMASDI-GRHPNDL--------LLEYPALDFSSLADIWWHTDGKGDPLAIFPESPEIFRARVAAFKEWLAARPERTIAVVSHWGVL 179          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11387.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0A0_9STRA4.860e-5656.79Histidine phosphatase superfamily n=1 Tax=Tribonem... [more]
F2UDE0_SALR55.890e-5249.44Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A0L0F2Q8_9EUKA5.530e-4365.26Uncharacterized protein (Fragment) n=1 Tax=Sphaero... [more]
A0A6U5YVT9_GUITH5.920e-1832.94Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
A0A0G4GGU6_VITBC8.320e-1532.10Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
UPI000DDB0F765.660e-1435.75phosphoglycerate mutase family protein n=1 Tax=Mic... [more]
A0A8J5XM83_DIALT7.870e-1433.52Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6U4XGG1_HEMAN2.280e-1334.25Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
UPI0019F8EB2C3.860e-1338.10Histidine phosphatase family protein n=1 Tax=Prote... [more]
A0A1Y1I690_KLENI8.620e-1329.38Phosphoglycerate mutase n=1 Tax=Klebsormidium nite... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11387contigP-wetherbeei_contig11387:351..1417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog946362.XP_004992892.1
PFAMsHis_Phos_1
Model size522
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.66e-53
EggNOG OGsKOG4754@1|root,KOG4754@2759|Eukaryota
Descriptionisomerase activity
Cds size522
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185909.1080096-CDS-P-wetherbeei_contig11387:350..6411683185909.1080096-CDS-P-wetherbeei_contig11387:350..641Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11387 351..641 +
1683185909.1209607-CDS-P-wetherbeei_contig11387:920..10191683185909.1209607-CDS-P-wetherbeei_contig11387:920..1019Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11387 921..1019 +
1683185909.1306615-CDS-P-wetherbeei_contig11387:1285..14171683185909.1306615-CDS-P-wetherbeei_contig11387:1285..1417Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11387 1286..1417 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11387.1.1prot_P-wetherbeei_contig11387.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11387 351..1417 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11387.1.1

>prot_P-wetherbeei_contig11387.1.1 ID=prot_P-wetherbeei_contig11387.1.1|Name=mRNA_P-wetherbeei_contig11387.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp
EHHHNATTLPTLSQVVYFIRHGQSLANTVWGEGNAKFDPSLRDSPLTEKG
KSQARRLQNVVGGLDVQLIISSPLTRTLQTACLAFENESTPIIAWPLVTE
FFPELPECHGRNKHELEKDERLTSLPRFGQVHLDNVVDEWWGCAGDETRV
ESLLSWLRHCPETRIAVVCHWGFI
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mRNA from alignment at P-wetherbeei_contig11387:351..1417+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11387.1.1 ID=mRNA_P-wetherbeei_contig11387.1.1|Name=mRNA_P-wetherbeei_contig11387.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1067bp|location=Sequence derived from alignment at P-wetherbeei_contig11387:351..1417+ (Phaeothamnion wetherbeei SAG_119_79)
GAACACCACCACAATGCAACCACACTTCCAACCCTGTCTCAGGTCGTGTA CTTCATCCGGCACGGGCAGAGCTTGGCCAATACGGTCTGGGGCGAAGGAA ACGCGAAGTTCGATCCTTCATTAAGGGATTCTCCTCTGACCGAAAAGGGG AAAAGTCAGGCGCGCCGCCTGCAAAACGTGGTTGGTGGCCTGGACGTCCA GCTGATCATCAGCTCTCCGCTCACCCGGACGCTCCAGACGGCCTGCCTGG CCTTCGAGAACGAGAGCACGCCGATCATCGCCTGGCCGCTGGTGAGGGAT GGAAGACGGCGGGGAGGGAGAAGAGAATGCTGTGGCTCTGTCTCGTGTCT CCCTTCTATTCCTTTGTTTTGCTCGCCTTTTTGCGCGCCAGAACCATACA ACACTGCCTTGGATCAGTCAGTACGTCAACGGTGTCGCACGTTCTTCGCG TTCTTCTCTTCCTTCCGATGTCTTAATATTGTGATTGAAAAGGTTGCTGG TTTTACCCCGGGGGAAATGATTGGAATGCCGACCCATCTGATGAAAAGAT GTCAATTCGCTGTGTCTCAGGTCACGGAGTTCTTCCCCGAACTGCCCGAG TGCCACGGGCGGAACAAGCACGAGCTGGAGAAGGACGAGCGACTGACCTC CTTGCCGCGCTTCGGACAGGTCAGCTAACTTTCTGCCTTGAAGCGTCATT GTTTGGAATCCTCTTGACACCTGGTAGTGGCGCTCCTGCCGCCGCCGCCG CCGCGCTGCTGCCGTCGCTGCCGCTGCCGCTGCCGCTGCTGCTGCTCCCG TTGTGACGGTACTCCTAATTTGCACATCATTCTACTACTCGCTTTGACCA AAGTGCCGCAACTACCATCAACACGCGCGCACTCCCTTTCCCTGTCCGTC ACTCGCCACTTCCTTTCCCATCGGGGTCCTTCAAGGTGCACCTGGACAAC GTGGTGGACGAGTGGTGGGGCTGCGCAGGAGACGAGACGCGCGTCGAGTC GCTGCTGTCGTGGCTCCGCCACTGCCCCGAGACGCGTATCGCCGTAGTTT GCCACTGGGGCTTCATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11387:351..1417+

>mRNA_P-wetherbeei_contig11387.1.1 ID=mRNA_P-wetherbeei_contig11387.1.1|Name=mRNA_P-wetherbeei_contig11387.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig11387:351..1417+ (Phaeothamnion wetherbeei SAG_119_79)
GAACACCACCACAATGCAACCACACTTCCAACCCTGTCTCAGGTCGTGTA
CTTCATCCGGCACGGGCAGAGCTTGGCCAATACGGTCTGGGGCGAAGGAA
ACGCGAAGTTCGATCCTTCATTAAGGGATTCTCCTCTGACCGAAAAGGGG
AAAAGTCAGGCGCGCCGCCTGCAAAACGTGGTTGGTGGCCTGGACGTCCA
GCTGATCATCAGCTCTCCGCTCACCCGGACGCTCCAGACGGCCTGCCTGG
CCTTCGAGAACGAGAGCACGCCGATCATCGCCTGGCCGCTGGTCACGGAG
TTCTTCCCCGAACTGCCCGAGTGCCACGGGCGGAACAAGCACGAGCTGGA
GAAGGACGAGCGACTGACCTCCTTGCCGCGCTTCGGACAGGTGCACCTGG
ACAACGTGGTGGACGAGTGGTGGGGCTGCGCAGGAGACGAGACGCGCGTC
GAGTCGCTGCTGTCGTGGCTCCGCCACTGCCCCGAGACGCGTATCGCCGT
AGTTTGCCACTGGGGCTTCATC
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