mRNA_P-wetherbeei_contig11386.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11386.1.1
Unique NamemRNA_P-wetherbeei_contig11386.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11386.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11386contigP-wetherbeei_contig11386:2..2161 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog218851.Aquca_010_00428.1
PFAMsPkinase_Tyr
Model size1835
Max annot lvl35493|Streptophyta
KEGG koko:K04427,ko:K17535
KEGG Pathwayko04010,ko04013,ko04064,ko04140,ko04152,ko04214,ko04310,ko04380,ko04520,ko04620,ko04621,ko04622,ko04624,ko04657,ko04660,ko04668,ko05140,ko05145,ko05162,ko05168,ko05169,ko05418,map04010,map04013,map04064,map04140,map04152,map04214,map04310,map04380,map04520,map04620,map04621,map04622,map04624,map04657,map04660,map04668,map05140,map05145,map05162,map05168,map05169,map05418
KEGG ModuleM00686,M00688,M00689
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564
Exons3
Evalue1.37e-05
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota,37P7S@33090|Viridiplantae,3GG2H@35493|Streptophyta
EC2.7.11.1,2.7.11.25
Descriptionserine threonine-protein kinase
Cds size348
COG categoryT
BRITEko00000,ko00001,ko00002,ko01000,ko01001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185909.0331638-UTR-P-wetherbeei_contig11386:1..9661683185909.0331638-UTR-P-wetherbeei_contig11386:1..966Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11386 2..966 +
1683185909.0438275-UTR-P-wetherbeei_contig11386:1095..14181683185909.0438275-UTR-P-wetherbeei_contig11386:1095..1418Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11386 1096..1418 +
1683185909.0766149-UTR-P-wetherbeei_contig11386:1962..21611683185909.0766149-UTR-P-wetherbeei_contig11386:1962..2161Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11386 1963..2161 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185909.0551646-CDS-P-wetherbeei_contig11386:1418..15261683185909.0551646-CDS-P-wetherbeei_contig11386:1418..1526Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11386 1419..1526 +
1683185909.0676985-CDS-P-wetherbeei_contig11386:1722..19621683185909.0676985-CDS-P-wetherbeei_contig11386:1722..1962Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11386 1723..1962 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11386.1.1prot_P-wetherbeei_contig11386.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11386 1419..1962 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11386.1.1

>prot_P-wetherbeei_contig11386.1.1 ID=prot_P-wetherbeei_contig11386.1.1|Name=mRNA_P-wetherbeei_contig11386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp
MNNPAALRWRDPHSFGMVCFELFAEGKPFLGLNNTESNLPGQLRFRVLNN
HRSTLQQERHAPPPAVAALMERYWNADPAQRPRTDEIVAAFGALRRAFPI
GGGPVPVRRLLSSDG*
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mRNA from alignment at P-wetherbeei_contig11386:2..2161+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11386.1.1 ID=mRNA_P-wetherbeei_contig11386.1.1|Name=mRNA_P-wetherbeei_contig11386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2160bp|location=Sequence derived from alignment at P-wetherbeei_contig11386:2..2161+ (Phaeothamnion wetherbeei SAG_119_79)
AGAACTTTGTAAGGAGGAAGATTACTTTTTCCTCCTCGTCGGACAGAGAT
TTCAATCCTCCTCGTGTTTAGCAACCCGAGGCACTGCAATCACATGCAGG
CCGAGAGCGCGTCATACGCCAGGCCATCAAGAACGGCCACTGCTGTGATC
GCAACAGGGTAACCGTCCTCCCTGCCGCGACGGTCAACGATTTCTCGCGG
GCCTTGCTGGAGGAGAGGTACGACGTGCTGCACTTCTCTGGTCACGCGGA
CCCGCAGACGAACGCCCCTGTCTGTCTTATTGGCCAACATTCGCGACGCC
CACGGCGAGGAGGCGCTGGAGGCCGTCCGCAACGATGCTGAGGCGATATT
GGCACTAGAGGAGGTGGCCGGGACGCTCCTCAGGCAGCTCGAAGAGCACT
TGGCGGACGAGGTCCACCGTTGCAGCGGCTCTTCCTTGAGGGATAACGCC
GCACATGTCGAAGTGAGGATTCCCGCCTTGAGGGCGAGCCTTGACCATGG
TAGCGCCGACTCCTGCGTCAACACGTCCTCAGTGCCGGTTCTCCACGAGC
GAGCTGCTGGAAGCCGTCGTCGACGCGCTGGCGTTTGAAGGAGAAAACAA
CCACCTGTGCTTTGTCCGTGCCAACGACTTTGCTGCCTTGCTGAACGCGC
ACTCGTCGCGCCTGAGATGAGCTCTTGTTTGGCCGGGGGATCTCTGTTCT
TTGATGACGTATTTAAGCGATTCACTATTGGAATGAAAAAAGCGGTCGAT
CATCGGTTTGCTGAGATTGTAGAGGGCTTAACTCTAGCAAATTTTCTGTT
TCGGTCCCGTCTTTGTTTTCTTTGCACTTCAAAACGAACGATATTTACTA
GTTCAATGATGAGGGAATAATACTCGCCTTGCTCTGTTCTTTTGCTCACC
TTATGCTGCACAGATGTGTGGTGCTGAACGCCTGCGGCTCCAGCCTCCGA
TGTCTGCTGGTCACTGTAAGTGTAATGGCGGATCTCTTGGCAGCGCCGAT
TGGGCGATTGGCTCTTGTTGCGGGAATGTGAACCCCCTTTTCCCCATATG
CTGCAAACCTGCCTCCGACTCTTTTTAAACATCGTCGAGCGCAGGCGCCT
TGAAGACTCGTAACCTCCTCATCTTCGAGCCATCCCGCGTAAAGCTGTGC
GACTTCAGGCTCTCCTCGGTGATGCGCTCCGCTAGCCGCCGCATCAGCCG
GCCGCCCGTCGGCACCGTGTGATGGATGGCCCCCGAGGTGAGACGTCCTC
GGCCATGTGAAATGAGGCGGCACAGACCGTTGAGCCAGCTTTCCGCTGGC
GAGCATCCTGGAACGTGTAGCAGTAGAGTTATCATAGCAAAAGAGGAGAG
AAAGGGTTGTTCGACTTACCTTTTGGTCCCCGCAAATGCATTGAAGCCGT
CGCAGTGAGGGTAGCTGATGAATAATCCAGCAGCTCTTCGATGGAGGGAC
CCCCACTCGTTCGGGATGGTCTGCTTCGAGCTCTTCGCGGAGGGAAAGCC
TTTTCTGGGCCTCAACAACACCGAGGTGCGTCCGTTGCGGCAGGTTAAAG
AGTGTTATCACCGCCCTTATGCTCCGTGTTTTGCCATGGTCATCTTAGTG
AAAAATAACTTCCTCATTCCTGAAATGAGAGGTTAAATTTGTTTACTCAC
GTCAGAATCCTCTTTTCTTTCCGTCATCCCTGTTCCCTCTGGCGTCTCCG
TCGCTGCACTCGACCCCCCAGTCCAACCTGCCTGGGCAGTTGAGGTTCCG
AGTGCTGAACAACCATCGGTCGACCCTGCAGCAAGAACGGCACGCCCCGC
CGCCGGCCGTGGCGGCCCTGATGGAGCGCTACTGGAACGCGGACCCGGCA
CAACGGCCGCGCACTGACGAGATCGTTGCCGCCTTTGGCGCGCTGCGGAG
GGCGTTCCCCATCGGCGGCGGCCCCGTACCGGTGCGGCGATTGCTCAGTT
CAGACGGCTGAGGCTGAGGCACGCGTTGCTTTGTGTCTGATGCAGTGGCA
GAGCTTAGATGTGAAGGAGGCTACATTGTTAGGCCGATTTGCTCGTACAG
TGCGGGTCCTAAAAACCACTTCTGATAATGACGCACGAGGCATGTAGATG
AGGATAGTTTCACGGCGACTGTTTATCACCTGAAATAAGTTAGCCATCGC
GCCGCCCCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11386:2..2161+

>mRNA_P-wetherbeei_contig11386.1.1 ID=mRNA_P-wetherbeei_contig11386.1.1|Name=mRNA_P-wetherbeei_contig11386.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=348bp|location=Sequence derived from alignment at P-wetherbeei_contig11386:2..2161+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAATAATCCAGCAGCTCTTCGATGGAGGGACCCCCACTCGTTCGGGAT
GGTCTGCTTCGAGCTCTTCGCGGAGGGAAAGCCTTTTCTGGGCCTCAACA
ACACCGAGTCCAACCTGCCTGGGCAGTTGAGGTTCCGAGTGCTGAACAAC
CATCGGTCGACCCTGCAGCAAGAACGGCACGCCCCGCCGCCGGCCGTGGC
GGCCCTGATGGAGCGCTACTGGAACGCGGACCCGGCACAACGGCCGCGCA
CTGACGAGATCGTTGCCGCCTTTGGCGCGCTGCGGAGGGCGTTCCCCATC
GGCGGCGGCCCCGTACCGGTGCGGCGATTGCTCAGTTCAGACGGCTGA
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