mRNA_P-wetherbeei_contig11370.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A835Z151_9STRA (Peroxin-3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z151_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.410e-63 Identity = 153/327 (46.79%), Postives = 194/327 (59.33%), Query Frame = 3 Query: 57 RFARRHRRALVIGGLAGAAVAGYWRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESP-EEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEEWLHMFRADVAAGEGPPATAPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPTGVSMEARHTFLSSTYEYLLGDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEMERPAEPAGATAAAGDA-ASTPPLLQYFINPRD 1031 RFA RHRRA+ + +A AAV Y +V++ L EAEA+Q R+ +E R+R Y RA+ EC TA++NFLPTLR RL+ T D++ PVR LK LR+ + G G GD P EEDP EAELW+EVKVT RL+ ++Y FSALNLMLRLQ+HILGR+S+EE + + + + P XXXXXXXXXX V + M+AR FLSSTYE+LLGDGLRALAADV AV+ +A W A+ + + +LR VR E+E GA AAAGDA A+ PLL+Y INP D Sbjct: 14 RFAHRHRRAIALSCVAAAAVTCYCKVQAALKEAEAIQAEFAERSAKERRFRLYLGRARAECRTAILNFLPTLRSRLYATADISRPVRALKALRQSRDAAASAQGEG----------GDPAPPPSEEDPAEAELWDEVKVTSFTRLLLSMYAFSALNLMLRLQMHILGRYSYEEASELLKREAGQKQQP------------------------GTXXXXXXXXXXERGVGASLPMDARRAFLSSTYEFLLGDGLRALAADVEAAVRTCSADWHCQSKLAVGWEELAGMLRRVRAEVEGGV--GGAAAAAGDAQAAQDPLLRYIINPID 304
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A6H5L882_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L882_9PHAE) HSP 1 Score: 179 bits (455), Expect = 4.770e-47 Identity = 152/389 (39.07%), Postives = 191/389 (49.10%), Query Frame = 3 Query: 18 MLQAIGGAAQAVGRFARRHRRALVIGGLAGAAVAGYWRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRR------------VSRSPGGNSGCGXXXXXXXXXX----GDGHESPEEDP---REAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEEWLHMFRA-----DVAAGE----------GPPAT-APPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPTGVSMEARHTFLSSTYEYLLGDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEMERPAEPA----------GATAAAGDAASTPP------LLQYFINPRD 1031 M +A G AA+A GRFARRHRRA+V+GG+ GAA Y ++ L EAE A+ ++A + R R+ +R + EC+ A+ NFLP LRKRLF VDV GPVRELK LR GG XXXXXXXXXX DG + E + RE ELWE+VKVT L RL+ +LY F+AL LML +QLHILGR S EE + D+ G G P T + P +SME RH+ LS+TYE++LGDGLR L DV RAV T W+ + + D V V+R VR E+E P + G A G+ LL+Y INP D Sbjct: 1 MWKAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALREAEDEHAAMLVQAGRDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGMTGATAXXXXXXXXXXGGXXXXXXXXXXXXXXXXXAVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHILGRLSLEESQELLLRTSNDDDITPGSSTETAASLPHGNPGTMSSPSPLTTTTRNGVPAPPAAVRLGAGASDWSGGAVTAGLALSMEGRHSLLSATYEHVLGDGLRTLVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGGGDFNGVGGAVGEGLGRSSGIRHALLLRYIINPSD 389
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: D7FTT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT6_ECTSI) HSP 1 Score: 128 bits (321), Expect = 5.410e-32 Identity = 96/196 (48.98%), Postives = 118/196 (60.20%), Query Frame = 3 Query: 18 MLQAIGGAAQAVGRFARRHRRALVIGGLAGAAVAGYWRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRR---------------VSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDP---REAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHIL 551 M QA G AA+A GRFARRHRRA+V+GG+ GAA Y ++ L EAE A+ ++A + R R+ +R + EC+ A+ NFLP LRKRLF VDV GPVRELK LR XXXXXXXXX DG + E + RE ELWE+VKVT L RL+ +LY F+AL LML +QLHIL Sbjct: 1 MWQAAGDAARAAGRFARRHRRAIVVGGVVGAAACVYHSMKRALKEAEDEHAAMLVQAGHDARRRQCMSRTRGECVAALANFLPALRKRLFLAVDVTGPVRELKALRTGLAGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVADGSAAAEAEDLQSREVELWEQVKVTALTRLVVSLYAFNALALMLHMQLHIL 196
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: W7TYS6_9STRA (Peroxisomal biogenesis factor 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYS6_9STRA) HSP 1 Score: 117 bits (293), Expect = 6.570e-26 Identity = 104/338 (30.77%), Postives = 152/338 (44.97%), Query Frame = 3 Query: 36 GAAQAVGRFARRHRRALVIGGLAGAAVAGY--WRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFE----EWLHMFRADVAAGEGPPATAPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPTGVSM---EARHTFLSSTYEYLLGDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEMERPAEPAGATAAAGDAASTPPLLQYFIN 1022 G Q V F +R+RRA IG +AGA+ AG+ WR++ +L + + + R L L++ R + + R++ EC+ A++NF+ TLRKR++E VDV PV+ LK G G S +E E LW +VKV+G R A Y F+ LN+MLR+Q+HILGR++FE E L + D G+GP TG S + R LS YE+ LG+GLR L V AV+ W + + Y + + L +R +E P G + PLLQY ++ Sbjct: 2 GRLQQVYHFLKRNRRA--IGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKA-------------------------GRGGLSKQE---EQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGP---------------------------RGEFCSLGDAGYAATGSSSFGSDDRCRLLSLVYEHFLGEGLRRLKEAVEVAVREELGAWSVHAKIHVDYAELHDALMRIRRRLEGP---------RGVLLAESPLLQYVLD 273
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: K8YNM0_NANGC (Peroxin-3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YNM0_NANGC) HSP 1 Score: 102 bits (255), Expect = 2.180e-22 Identity = 75/200 (37.50%), Postives = 110/200 (55.00%), Query Frame = 3 Query: 36 GAAQAVGRFARRHRRALVIGGLAGAAVAGY--WRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFE----EWLHMFRADVAAGEGP 617 G Q V F +R+RRA IG +AGA+ AG+ WR++ +L + + + R L L++ R + + R++ EC+ A++NF+ TLRKR++E VDV PV+ LK G G S +E E LW +VKV+G R A Y F+ LN+MLR+Q+HILGR++FE E L + D G+GP Sbjct: 2 GRLQQVYHFLKRNRRA--IGLIAGASAAGFAAWRIKRVLDDYKRIIREHDLARLDQHRLQMHMLRSRGECVPALLNFMQTLRKRVYEIVDVTSPVKALKA-------------------------GRGGLSKQE---EQALWHQVKVSGFSRFFLAYYGFNLLNVMLRVQVHILGRYAFEASRQEMLQAAQRDQEEGQGP 171
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A2R5G1R0_9STRA (Peroxisomal biosis factor 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1R0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.410e-13 Identity = 70/302 (23.18%), Postives = 129/302 (42.72%), Query Frame = 3 Query: 60 FARRHRRALV-IGGLAGAAVAGYWRVRSL----LHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEEWLHMFRADVAAGEGPPATAPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVPTG-VSMEARHTFLSSTYEYLL--GDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEME 941 F + H++ + +G + V GY+ + + + + E L R L+ + +E AR + EC + ++ F+P LR + + D LK +R ++ +G S +++ +LW+E+KV L RL+ ++Y LN +LR+QLHILGR++FEE + RA+ AA A + TG VS R +FL S ++ + G G+ + ++ +++ T W M + D + ++ ++R E+E Sbjct: 11 FLKWHKKKFIALGSVTALGVGGYYYAKRMVLDGMRQVEELGRGLQEKMMETQYRESELARVRAECGSMILTFVPPLRNMVKKLTDPKPVTERLKAVRLKRKN-------------------EGMPSAQDEEEVMQLWDELKVISLARLIVSIYALGLLNCVLRIQLHILGRYAFEEAISQRRAEAAASSETADAAGVKQLEAGVEGAASASHVSEES---------------TGLVSQRLRESFLFSGSDHFMNSGSGMETMLYHIQESIQRATKDWHMGTDATVNRWDILNMIDKIREEVE 278
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A7S2SEF3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SEF3_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.810e-12 Identity = 72/305 (23.61%), Postives = 129/305 (42.30%), Query Frame = 3 Query: 60 FARRHRRALVIGGLAGAA-VAGYWRVRSL----LHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLR-RVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEEWLHMFRADVAAGEGPPATAPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVP--TGVSMEARHTFLSSTYEYLL--GDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEMER 944 F + H++ + G+ GAA V GY+ + + + + E L R + + +E + R ++EC ++ F+P LR + + D +LK +R R+ S SP E+ +LW+E+KV L RL+ ++Y + LN +LR+QLHILGR+SFEE FR +V+ + P T ++ + R FL + ++L+ GDG++ L + + T W M + D ++++ +R +E+ Sbjct: 11 FLKWHKKKFIALGVVGAASVGGYYYAKRMVLDGMRQVEELGRGFQEKFMETQHRKSELLRIRSECSRMILTFIPPLRSMVKQLTDPKPVTEKLKNVRLRIKNSVAS--------------------SPVEEEEVQQLWDELKVVSLTRLLASIYTLALLNNLLRVQLHILGRYSFEESSE-FRREVSQ-------------------------LSLDAQKRGIEDAITEEISPEHTKITRKVRERFLFAGSDHLMNTGDGMKVLVKHIHDCISFGTKDWLMGTDATVTRQDILKMVVSIREAIEK 269
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A225WFR2_9STRA (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A225WFR2_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.180e-8 Identity = 55/187 (29.41%), Postives = 87/187 (46.52%), Query Frame = 3 Query: 18 MLQAIGGAAQAVGRFARRHRRALVIGGLAGAAVAG--YWRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEE 572 M A+ A QA FARRH++ L++ G+ GAA AG Y+ R +L EAE ++ + E R + E V FLP L+ RL++ +D+ V+ELK L + ++ + ELWE+ K+ R +TAL F +L++ Q+ I+G+ FE+ Sbjct: 1 MWSALQHAKQAACGFARRHKKLLIVTGV-GAACAGGAYYAYRRVLGEAERFSLQIQEQMAEHQRLQLALGSTADESRATVRRFLPRLKTRLYQLLDLESVVQELKTLDKTQKN-----------------------------KRNELWEDAKLLAFTRYLTALVAFGLWHLLVFAQVSIIGKRVFEK 157
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: A0A3F2RIV6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RIV6_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.210e-8 Identity = 53/187 (28.34%), Postives = 89/187 (47.59%), Query Frame = 3 Query: 18 MLQAIGGAAQAVGRFARRHRRALVIGGLAGAAVAG--YWRVRSLLHEAEALQRALRLRALEEDRYRRYQARAKTECLTAVVNFLPTLRKRLFETVDVNGPVRELKQLRRVSRSPGGNSGCGXXXXXXXXXXGDGHESPEEDPREAELWEEVKVTGLVRLMTALYVFSALNLMLRLQLHILGRHSFEE 572 M A+ A +A FARRH++ L++ G+ GAA AG Y+ R +L EAE + ++++ E R + E V FLP L+ RL++ +D+ V+ELK L + ++ R LWE+ K+ + R +TAL F +L++ Q+ ++G+ FE+ Sbjct: 1 MWSALQHAKEAACGFARRHKKLLIVTGV-GAACAGGAYYAYRRMLSEAERFTQQIQVQMAEHQRLQLALGSTADESRATVRRFLPRLKTRLYQLLDLESVVQELKTLDKTQKT-----------------------------RRNALWEDAKLLTVTRYLTALVAFGLWHLLVFAQVSVIGKRVFEK 157
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Match: D7FTT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT5_ECTSI) HSP 1 Score: 67.0 bits (162), Expect = 1.290e-8 Identity = 44/113 (38.94%), Postives = 55/113 (48.67%), Query Frame = 3 Query: 753 MEARHTFLSSTYEYLLGDGLRALAADVRRAVKLRTAHWRMDKVGAICYTDFVEVLREVRLEMERP--------------------AEPAGATAAAGDAASTPPLLQYFINPRD 1031 MEARH+ LSSTYE++LG GLRAL DV RAV T W+ + + D V V+R VR E+E P E G ++ A LL+Y INP D Sbjct: 1 MEARHSLLSSTYEHVLGGGLRALVRDVERAVSRCTCSWKAHTRQQVEFQDLVAVIRRVRREVEGPIGGSAYYGGXXXXXXXXXAVGEGLGRSSGVRHAL----LLRYIINPSD 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11370.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11370.3.1 >prot_P-wetherbeei_contig11370.3.1 ID=prot_P-wetherbeei_contig11370.3.1|Name=mRNA_P-wetherbeei_contig11370.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=342bp MLQAIGGAAQAVGRFARRHRRALVIGGLAGAAVAGYWRVRSLLHEAEALQback to top mRNA from alignment at P-wetherbeei_contig11370:1021..2063+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11370.3.1 ID=mRNA_P-wetherbeei_contig11370.3.1|Name=mRNA_P-wetherbeei_contig11370.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1043bp|location=Sequence derived from alignment at P-wetherbeei_contig11370:1021..2063+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11370:1021..2063+ >mRNA_P-wetherbeei_contig11370.3.1 ID=mRNA_P-wetherbeei_contig11370.3.1|Name=mRNA_P-wetherbeei_contig11370.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1026bp|location=Sequence derived from alignment at P-wetherbeei_contig11370:1021..2063+ (Phaeothamnion wetherbeei SAG_119_79)back to top |