mRNA_P-wetherbeei_contig1137.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: D7FX25_ECTSI (Sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX25_ECTSI) HSP 1 Score: 144 bits (362), Expect = 2.100e-33 Identity = 80/202 (39.60%), Postives = 123/202 (60.89%), Query Frame = 1 Query: 325 SVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDK-VSIRDNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 S +K Q+SNI FI+THKT STTL +LYRYG H +A+F + G ++L ASK +Q R DI+ +H + +G F G +D + Y +IM + ++ +VT+LRE AHY+S+Y F P + ++EYLL + + N L AEFGI D ++ FI + +P F ++L ++ DEGL +L R+L+W+ +D+ Y Sbjct: 154 SASKRTEQLSNIAFIKTHKTASTTLASILYRYGMRHDSNIAKF--DQGGTYVDLD-VASKQVAKQGKRVDIMHYHHAWNG-FYSGTWDQATAKYAKIMSNQADVNYVTVLREPVAHYLSYYYYFLNPINKMPIDEYLLKNPHKKLLYNPLAAEFGIEDMAQMNHFIKKQMPKFKMVLLTERFDEGLALLQRMLQWDPIDMTY 351
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: A0A6H5L8E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E6_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.000e-32 Identity = 80/214 (37.38%), Postives = 125/214 (58.41%), Query Frame = 1 Query: 304 LHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIRDNL------LCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 L+ + E S NQV+N+VF++THKT STTL V YRY HK +A FG + G + NL KAA++ K D++ +H+S G + G + +Y+ IM+ + +VT+LRE R+H +S Y + P + S+E+YL+D + +N L AEFG+ ++ ++ FI HLP F L++ ++ +DE LV+L LL W ++DV Y Sbjct: 39 LNDLVEASARDADNQVANVVFVKTHKTGSTTLAAVFYRYAVRHKLKLAHFG-KGKGTIANLKKAATQTRKSG-ELVDVMHYHISHSGEYT-GTWPQAENYFRRIMRHPDSINYVTVLREPRSHLLSCYYFYIFPECELSIEDYLMDPAHAGDENRHRLRNPLSAEFGVKTAKEMNTFIVNHLPDFKLVMLTERMDESLVLLRSLLGWHMIDVTY 249
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: A0A6H5JIK1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIK1_9PHAE) HSP 1 Score: 134 bits (337), Expect = 6.240e-31 Identity = 81/213 (38.03%), Postives = 128/213 (60.09%), Query Frame = 1 Query: 304 LHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLD---DKVSIR--DNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 L+ + E + NQV+N+ F++THKT STT+ ++YRY H ++ FGG +V +L AA++ K R D++ +H+S G ++ G ++ ++Y IM+ ++ FVT+LRE R+H +S+Y F QP Q S+EE+LL + + R N L AEFG+ +E +D FI+ LP F L+L LDEGL+ L R+L W ++D+ Y Sbjct: 34 LNQLVEATTLDHGNQVTNVAFVKTHKTASTTVASIMYRYAARHHLKLSYFGGS---SVTDLRSAANET-KENGQRVDLMHYHISPRGQYM-GTWNEAVTHYRVIMRNPDDINFVTVLREPRSHLLSYYYYFLQPLHQQSIEEFLLSGHRNNIEHRMLSNPLSAEFGVRTAEEMDSFISSALPDFKLVLMR--LDEGLLTLGRMLHWHMIDLTY 239
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: D7FI84_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI84_ECTSI) HSP 1 Score: 129 bits (323), Expect = 4.220e-29 Identity = 76/216 (35.19%), Postives = 126/216 (58.33%), Query Frame = 1 Query: 310 LMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIR--------DNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLYHR 933 L+EE + A T Q N+ F +THKT STT+ +L RY H +A FGG A I L +A + + R D++ +H + G+F DG + ++ YE+IM++ + ++T++R R+H++S+Y + QP Q S++ + ++ + N LCAEFGI++ E L +FI LP F L+L ++ DEGL+++ R+L WE++D+ Y R Sbjct: 23 LVEETAEA-TGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSA-IPLTEAVQQIEESG-ERVDVMHYHYTAYGSF-DGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNRQDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSR 234
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: D8LRU8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRU8_ECTSI) HSP 1 Score: 130 bits (326), Expect = 5.470e-29 Identity = 85/224 (37.95%), Postives = 125/224 (55.80%), Query Frame = 1 Query: 280 GEIVPFASLHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQ-VSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIRD-------NLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 GE + L+ + S A+T Q+SNI FI+THKT STT +LYRY H +A F +D + I L +A + RQ R DI+ +HVS G F +G + Y I++ + FVT++RE R+H +S+Y F QP TQ ++ E+L K RD N L AEFG+ + L + + LP ++L ++ DEGL++L RLL+WE+VD+ Y Sbjct: 76 GEPTNRSYLNNLVANSAAQTEGQLSNIAFIKTHKTASTTFAFLLYRYARRHNVKLAHF--DDHNSAIPLREAVQQTEGRQGKGRCDIMHYHVSAFGQF-EGSWRQAEQAYRRILRNTKAVNFVTVVREPRSHLLSYYYYFLQPQTQKTIGEFLTQAKHP-RDPIHRRLFNPLSAEFGVKKRQDLRYVLEKALPNAKMVLLTEEFDEGLMVLRRLLRWEMVDMTY 295
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: A0A6H5JL02_9PHAE (ST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL02_9PHAE) HSP 1 Score: 130 bits (328), Expect = 1.510e-28 Identity = 76/220 (34.55%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 298 ASLHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIR--------DNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLYHR 933 A L+ + E + A T Q N+ F +THKT STT+ +L RY H +A FGG A I L +A + + R D++ +H + G+F DG + ++ YE+IM++ + ++T++R R+H++S+Y + QP Q S++ + ++ + N LCAEFGI++ E L +FI LP F L+L ++ DEGL+++ R+L WE++D+ Y R Sbjct: 207 AYLNGLVEETAAATGQQACNLAFAKTHKTASTTMAMILVRYARRHDMKLASFGGNHVSA-IPLTEAVQQIEESG-ERVDVMHYHYTTYGSF-DGRWAEAKAMYEKIMREGERINYITVVRSQRSHFLSYYYYYVQPEVQLSVQHFFGSNREDPQFQYQRRRLTNPLCAEFGIHNGEQLAQFIETELPDFRLVLLTEAFDEGLMMMRRILGWEMIDMTYSR 423
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: A0A6H5KIJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIJ9_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.290e-25 Identity = 79/234 (33.76%), Postives = 125/234 (53.42%), Query Frame = 1 Query: 298 ASLHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVE----------------------MRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIR--DNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 A L+ + +V + Q N+VF++THKT STT+ VLYRYG H + VARF E G + L AA + K +R DI +H +G F + + R +++IM + V +FVT+LR+ H++S++ + +P + +EEY + R +N L AEFGIY+ LD F+ HLP+F L + ++ +DEGLV+L R++ W+ +D+ Y Sbjct: 208 ARLNGLVAAAVERQRGQECNLVFVKTHKTASTTITAVLYRYGLRHGRRVARFKVE--GTAVTLEHAAEET-KESGNRVDIFHYHHVWNGYF-ESTWARARELFKDIMAEPVAPAAXXXXXXXXXXEPRESSGGGTKFVTVLRDPIDHWLSYFYFYYEPEMKIDVEEYFSSGRHKKRPLNNPLAAEFGIYNERDLDEFVLNHLPSFALTMLTEEVDEGLVLLGRVMGWDPIDITY 437
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: D8LI80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI80_ECTSI) HSP 1 Score: 110 bits (275), Expect = 6.260e-22 Identity = 77/231 (33.33%), Postives = 120/231 (51.95%), Query Frame = 1 Query: 298 ASLHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVE-------------------MRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIR--DNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 A L+ + +V + Q N+ F++THKT STT+ VLYRYG H + VARF E G + L AA + K +R DI +H +G F + ++ R +++IM + V +FVT+LR+ H++S++ + +P + +EEY + R +N L AEFGIY+ LD F+ HL L D+ DEGLV+L R++ W+ +D+ Y Sbjct: 153 ARLNGLVAAAVERQRGQECNVAFVKTHKTASTTITAVLYRYGLRHGRRVARFKVE--GTAVTLEHAAEET-KESGNRVDIFHYHYVWNGYF-ESTWEKARGLFKDIMAEPVAPPVAAAAAAVEPRESSSSGTKFVTVLRDPVDHWLSYFYFYYEPEMKMDVEEYFSSGRHKNRPLNNPLAAEFGIYNERDLDEFVLNHLTE----LRPDV-DEGLVLLGRVMGWDPIDITY 374
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: F2UNN1_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UNN1_SALR5) HSP 1 Score: 85.1 bits (209), Expect = 8.460e-14 Identity = 64/206 (31.07%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 337 TPNQVSN----IVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDG--DFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQT-SLEEYLLDDKVSIRDNLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLYHR 933 TP SN I +I+THKT S+TL + +RYG H + + G + +A+ +DI+V+H + + ++ +Y E++ +FVTILRE +HY+S+Y + +P + LEE++ + N+L +FG+ E +D+F+ E+ P F +L SD + E LVILA L W L D+ Y + Sbjct: 134 TPRNASNPEQRISYIKTHKTGSSTLGSIFFRYGARHD--LTLYKSPTHGLRVRYKNSATIP-------ADIVVYHYAGIPTALRSIAAWEAAYKWYTEVVPNG---KFVTILREPISHYLSYYYFYDEPKANSLPLEEFV---ERGNHANILMRDFGVRTPEEMDKFMREYAPVFRTLLLSDRMHESLVILANDLGWSLWDMTYTK 324
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Match: D8LRU7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU7_ECTSI) HSP 1 Score: 82.4 bits (202), Expect = 2.370e-13 Identity = 69/260 (26.54%), Postives = 113/260 (43.46%), Query Frame = 1 Query: 166 HITPDTIRRRHHEGSGSRALRSSKQLFEGANVELDRNHGEIVPFAS-LHLMEEMSVAKTPNQVSNIVFIRTHKTVSTTLKDVLYRYGWIHKKIVARFGGEDPGAVINLPKAASKAHKRQVSRSDIIVHHVSRDGAFVDGDFDMMRSYYEEIMQKEVEMRFVTILREARAHYISHYASFTQPYTQTSLEEYLLDDKVSIRD-----NLLCAEFGIYDSEGLDRFIAEHLPTFTLILDSDMLDEGLVILARLLKWELVDVLY 927 H+ + ++R G A +++ L G + G + P S L+ + E ++ T +QV+N+ F++THKT STTL ++YRY H+ ++ FGG G+ ++L AA+K S+EE+L+ S +D N L AEFG+ +E LD I++ LP F LIL ++ L+EGL++LAR+L W ++D+ Y Sbjct: 62 HVRSLSAQQRSLAAEGDEATETTQGLG-GVAQDHPSLEGRMKPRRSYLNELVEATMLDTDSQVANVAFVKTHKTASTTLAAIMYRYAARHELKLSHFGG---GSAVSLKSAAAKI----------------------------------------------------------------------SIEEFLMHTAGSSKDHKLLYNPLSAEFGVRTAEQLDSLISDTLPDFKLILLTERLEEGLLVLARMLHWHMIDLTY 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1137.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1137.3.2 >prot_P-wetherbeei_contig1137.3.2 ID=prot_P-wetherbeei_contig1137.3.2|Name=mRNA_P-wetherbeei_contig1137.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=416bp MEGTQPTGCNAVKWPCFRAFCIASGVALCLVVRQHHITPDTIRRRHHEGSback to top mRNA from alignment at P-wetherbeei_contig1137:3137..7073+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1137.3.2 ID=mRNA_P-wetherbeei_contig1137.3.2|Name=mRNA_P-wetherbeei_contig1137.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3937bp|location=Sequence derived from alignment at P-wetherbeei_contig1137:3137..7073+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1137:3137..7073+ >mRNA_P-wetherbeei_contig1137.3.2 ID=mRNA_P-wetherbeei_contig1137.3.2|Name=mRNA_P-wetherbeei_contig1137.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1248bp|location=Sequence derived from alignment at P-wetherbeei_contig1137:3137..7073+ (Phaeothamnion wetherbeei SAG_119_79)back to top |