mRNA_P-wetherbeei_contig1135.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A2V3IDA5_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDA5_9FLOR) HSP 1 Score: 92.4 bits (228), Expect = 1.820e-19 Identity = 52/121 (42.98%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 1 DALDDAAARVAAEIEAYKKVKRTVQQVPPCGGAELIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRL 363 ++L A V AEI +Y +R + L +W++ +++P LS VAR V HP S+A I+RDF AG+ +S+RR R SA+VDM+LFLH N DLIP +P +S E +IP RL Sbjct: 212 ESLSTAEESVRAEINSYLDHERALPGDVTSRNL-LNWWRTKGSKYPSLSVVARAVLGHPVSSARIDRDFGTAGSFLSSRRTRHDSAFVDMLLFLHCNLDLIPSDVPEMSNPEWKSQIPARL 331
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A2V3IUX2_9FLOR (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX2_9FLOR) HSP 1 Score: 83.6 bits (205), Expect = 9.310e-18 Identity = 39/88 (44.32%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 103 LIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRLT 366 L++W+S +P LSQV + V P S+A ERDF AG+L+S++R ++ SA+VD+ LFL+ N ++I ++IP I+AK +IP R+T Sbjct: 24 LMWWRSRECRYPYLSQVVKAVLGSPASSAQTERDFGVAGSLLSSKRNKIDSAFVDISLFLNCNSEIIQMSIPEITAKNWQEKIPARMT 111
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5L5L6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L6_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.790e-17 Identity = 42/103 (40.78%), Postives = 63/103 (61.17%), Query Frame = 1 Query: 43 EAYKKVKRTVQQVPPCGGAELIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRI 351 ++Y KRT+ ++ C L +WK + +P+L++ ARVV+ P SAA +E DF DAG ++++ R + YV+MILFLH N DLIP IPA + R+ Sbjct: 20 QSYALQKRTIDELS-CDSV-LKWWKRWMSSYPLLARAARVVFGAPASAAVLEGDFGDAGRIMTSSRSTTDAKYVEMILFLHGNLDLIPEDIPACQPTAPSARL 120
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5JZ82_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ82_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 2.390e-16 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = 1 Query: 103 LIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRL 363 L +WK A +P+L++VARVV+ P SAA +ERDFS+AG ++++ R + S YV+MI+FLH N DLIP I ++ +IP RL Sbjct: 608 LKWWKMWAHAYPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRSTMDSKYVEMIMFLHGNLDLIPEDITKLTEAAARTKIPGRL 694
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: D8LBK4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK4_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 5.990e-16 Identity = 47/126 (37.30%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 34 AEIEAYKKVKR-TVQQVPPCGGAELIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRLTGRRTRVRGAEDSSG 408 AE+E + V+ T+ C G L +WK +P+L++ ARVV+ P SAA +ERDF+DA ++++ R + YV+M+LFLH N DLIP IP + +++ +IP RL+ + G + + G Sbjct: 525 AELETLRGVEAGTLTDDLSCEGV-LEWWKKWGRLYPLLARAARVVFGAPASAAVLERDFTDAWCMMASSRSAGDAKYVEMVLFLHGNLDLIPEQIPELRDEDVQAKIPGRLSNPIPELHGLDGTLG 649
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5KCJ3_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ3_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 7.980e-15 Identity = 39/78 (50.00%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 133 FPILSQVARVVYAHPTSAAAIERDFSDAGNLI-SNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRL 363 +P+L++VARVV+ P SAA +ERDFS+AG ++ S+RR + YV+MILFLH N DLIP I ++ +IP RL Sbjct: 6 YPLLARVARVVFGAPASAAVLERDFSNAGRMMTSSRRTMDSTTYVEMILFLHGNLDLIPEDITKLTEAVARSKIPGRL 83
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE) HSP 1 Score: 74.3 bits (181), Expect = 4.030e-14 Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 28 VAAEIEAYKKVKRTVQQVPPCGGAELI-FWKSLATE-FPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIP--VTIPAISAKELAGRIPLRLTGRRTRVRGAE 396 V+ EIE Y + T +++ E++ +W+ + FP L+ VA+ V+ + AA +ERDFS NL++ R R+ + +V+M++FLHANF+ IP IP I+AK++ +P R G + AE Sbjct: 8 VSQEIERYHSLYITAEELDT---REILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPRFNGGDADLAAAE 131
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5JNY1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNY1_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 5.810e-14 Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 103 LIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRL 363 L +WK A +P+L++VARVV SAA +E DFS+AG ++++ R + S YV+MILFLH N DLIP I ++ +IP RL Sbjct: 381 LKWWKMWAHAYPLLARVARVVIGALASAAVLEHDFSNAGRMMTSSRSTMDSKYVEMILFLHGNLDLIPEDITKLTEAVARTKIPGRL 467
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: A0A6H5JML0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML0_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 5.610e-13 Identity = 37/87 (42.53%), Postives = 55/87 (63.22%), Query Frame = 1 Query: 103 LIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAGRIPLRL 363 L +WK A +P+L++VARVV+ P SAA +E FS+AG + ++ R + S YV+MI+FLH N +LIP I ++ + P RL Sbjct: 144 LKWWKMWAHAYPLLARVARVVFGAPASAAVLECYFSNAGRMTTSSRSTMDSTYVEMIMFLHGNLNLIPEDITKLTEVVARTKFPGRL 230
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Match: D8LFP4_ECTSI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP4_ECTSI) HSP 1 Score: 73.6 bits (179), Expect = 1.910e-12 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1 Query: 88 CGGAELIFWKSLATEFPILSQVARVVYAHPTSAAAIERDFSDAGNLISNRRGRLGSAYVDMILFLHANFDLIPVTIPAISAKELAG---RIPLRLT 366 C G L +WK +P+L++VARVV+A P S ERD AG ++++ R + YV+M+LFLH N DL+P IP + A + G +IP RL+ Sbjct: 646 CEGV-LNWWKRKEHSYPLLARVARVVFAAPASVMVQERDLGSAGRMMTSSRSTGDAKYVEMVLFLHGNVDLLPEIIPELPADGVNGVQTKIPGRLS 740 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1135.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1135.4.1 >prot_P-wetherbeei_contig1135.4.1 ID=prot_P-wetherbeei_contig1135.4.1|Name=mRNA_P-wetherbeei_contig1135.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp DALDDAAARVAAEIEAYKKVKRTVQQVPPCGGAELIFWKSLATEFPILSQback to top mRNA from alignment at P-wetherbeei_contig1135:5703..6134- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1135.4.1 ID=mRNA_P-wetherbeei_contig1135.4.1|Name=mRNA_P-wetherbeei_contig1135.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig1135:5703..6134- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1135:5703..6134- >mRNA_P-wetherbeei_contig1135.4.1 ID=mRNA_P-wetherbeei_contig1135.4.1|Name=mRNA_P-wetherbeei_contig1135.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig1135:5703..6134- (Phaeothamnion wetherbeei SAG_119_79)back to top |