mRNA_P-wetherbeei_contig1135.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1135.1.1
Unique NamemRNA_P-wetherbeei_contig1135.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: A0A1Y1HYQ8_KLENI (RNA-binding protein Nova-1 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYQ8_KLENI)

HSP 1 Score: 144 bits (363), Expect = 8.780e-34
Identity = 108/337 (32.05%), Postives = 159/337 (47.18%), Query Frame = 3
Query:  732 SAFKLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSKELVV--ANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMT---PLYSAADVPGGTIPT-------AQG--------LPTDVLAQALS----GPPTTTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            S+ + +++++ AG++IGKGG +I E Q  + A +++S N   FPGT DR+ L+SG+I ++L A   IL  I T++  G                                                      +++VP    G IIG+GGA I+     S A + +  ++  V    +R +TITG L     AV L++ K+ E P  +LY+NM     +Y+   +P G +P         QG        LP   +AQ       GPPT  + V +PD  VGA+VGRGG  I E++  +G  I IS R DF+ GT NR +TI+G    TQ A YLL Q
Sbjct:   98 SSVRFLISNASAGSIIGKGGSTISEFQLQSGARIQLSRNREFFPGTTDRIILLSGTINAILTALHLILSKIMTEEAGGGDISQKTSQV--------------------------------------------KLIVPNAVCGGIIGKGGATIRAYVEDSAANIKLSGQDQAVPGVTDRIVTITGKLEQQMRAVALILAKMTEDPNYMLYSNMPLSYSVYTPVGMPHGPMPLHGFPMGPGQGMPFQQHPILPPQHMAQLAGMIPGGPPTHAITVAVPDEHVGAIVGRGGRTITEIQQMAGVRIKISDRGDFVMGTTNRKITITGPLEGTQIAQYLLSQ 390          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: L8IMA2_9CETA (RNA-binding protein Nova-2 (Fragment) n=3 Tax=Laurasiatheria TaxID=314145 RepID=L8IMA2_9CETA)

HSP 1 Score: 140 bits (353), Expect = 1.960e-33
Identity = 103/312 (33.01%), Postives = 158/312 (50.64%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSAADVPGGTIPTAQGLPTDVLAQALSGPPTTTM-QVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P      N+    S A+V G   P A   PT + A+ L+      + ++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:    8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI----SYANVAG---PVANSNPTGLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 281          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: A0A836CIW2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIW2_9STRA)

HSP 1 Score: 142 bits (358), Expect = 2.330e-33
Identity = 109/357 (30.53%), Postives = 165/357 (46.22%), Query Frame = 3
Query:  726 PTSAFKLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSKELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYS--------------------AADVPGGTI-----------------------PTAQGLPTDVLAQALSGPPT-TTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLL 1664
            P  A KL+++++ AG++IGK GQ+I+ +Q  + A V+VS++G   PGT DRV LV+G +  V  AC  +LH++H   R                                                  + EV QR+L+PA A G +IGRGG+ IK ++ SSGARVS+  K+   ++ER +TI G L   +  + +L+  L   P   +YTN++  Y+                    +A+  G ++                       P     PT  +A A++G    TT+ V IPDN+                + SGA IN+S R DF+PGT NR +TI+G+P A QAA +L+
Sbjct:   46 PPCALKLLVSNNMAGSLIGKAGQTIQNVQLQSGAVVKVSTSGMYLPGTQDRVVLVTGDLPRVKAACALVLHTVHEQGR---------------------------------DRDCGVPAPLDIGTERDALEVTQRLLIPASAGGLVIGRGGSNIKGLSESSGARVSLSQKQTSPSSERVVTIGGSLGACRLCIDMLLDTLKREPAAAVYTNLSVNYAHPPAGAAAAXXXXXXXXXTGSAEATGISVDRHARQPLPPLPTYPPEMLDLIQPLNMPAPTHPVAAAVAGAAAVTTITVSIPDNM----------------STSGARINVSQRGDFIPGTSNRTVTITGSPAAAQAAQFLI 353          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: UPI0006D8E78A (RNA-binding protein Nova-2 n=1 Tax=Bos mutus TaxID=72004 RepID=UPI0006D8E78A)

HSP 1 Score: 138 bits (347), Expect = 3.150e-32
Identity = 101/311 (32.48%), Postives = 155/311 (49.84%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSAADVPGGTIPTAQGLPTDVLAQALSGPPTTTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P      N+    S A+V G   P A   PT    +  +      +++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:   49 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNI----SYANVAG---PVANSNPTVTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 321          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: UPI002021856E (RNA-binding protein Nova-2 n=1 Tax=Myodes glareolus TaxID=447135 RepID=UPI002021856E)

HSP 1 Score: 135 bits (339), Expect = 3.570e-31
Identity = 103/324 (31.79%), Postives = 156/324 (48.15%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSAADVPGGTIPTAQ--GLPTDVLAQALSGPPTTT-----------MQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P      N++    A  V     PT      P DVL  A +    T            +++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:   28 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSN-PTGSPYASPADVLPAAAAASAATAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 319          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: D2I064_AILME (Uncharacterized protein (Fragment) n=4 Tax=Eutheria TaxID=9347 RepID=D2I064_AILME)

HSP 1 Score: 135 bits (339), Expect = 4.400e-31
Identity = 107/329 (32.52%), Postives = 161/329 (48.94%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPT--------------PVLYTNMT--PLYSAADVPGGTIPTAQGLPTDVL-AQALSGPPTTTM-QVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P               PV  +N T  P  S ADV    +P A G     L A+ L+      + ++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:   36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADV----LPAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 329          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: A0A1S3GH48_DIPOR (RNA-binding protein Nova-1-like n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A1S3GH48_DIPOR)

HSP 1 Score: 135 bits (339), Expect = 4.400e-31
Identity = 106/327 (32.42%), Postives = 157/327 (48.01%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPT--------------PVLYTNMT--PLYSAADVPGGTIPTAQGLPTDVLAQALSGPPTTTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P               PV  +N T  P  S ADV       A G  T     A S      +++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:   36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAAAGGFLTAEKLAAESA--KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 329          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: A0A454Y0A2_OSTTA (Uncharacterized protein n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A454Y0A2_OSTTA)

HSP 1 Score: 134 bits (338), Expect = 4.650e-31
Identity = 102/320 (31.87%), Postives = 154/320 (48.12%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSKELVV--ANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSA-----ADVPGGTIPTAQGLPTDVLAQALSGPPTTTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQLLA 1679
            K +++ S AG+VIGKGG +I E QA T A V++S +   FPGT DRV +VSG + ++L     IL  +  D                                                  +G+P++   ++VP    G +IG+GG+ I+     S A + + +++ ++   N+RT+TITG +  V  AV L+   L E P+     +    YS      A + GG      G      ++   G   T++ V IPD+L+GAV+GRGG  I E++  SG  I +S RDDF  GTRNR + I+G+    Q A+YLL Q L+
Sbjct:   43 KFLISPSAAGSVIGKGGATINEFQALTGARVQLSRSREVFPGTNDRVVIVSGDLNAILQVLYLILTKLVADGEG--------------------------------------------IDRSGTPQLA--LVVPNGCCGCVIGKGGSKIRNFVEDSQADIKLSNQDRMLPGCNDRTLTITGAMDSVLRAVALVATTLCEDPSYATLVHRQSTYSVQAPLGARIGGGRRSGDHGRSVSGSSRR-GGDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSARDDFFEGTRNRKVVITGSQEGVQMANYLLTQKLS 315          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: A4RQR8_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RQR8_OSTLU)

HSP 1 Score: 134 bits (338), Expect = 5.280e-31
Identity = 105/329 (31.91%), Postives = 151/329 (45.90%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSKELVV--ANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSAAD---VPGG-----------TIPTAQGLPTDVLAQALSGPPTTTMQVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQLLA 1679
            K +++ S AG+VIGKGG +I E QA T A +++S N   FPGT DRV +VSG + ++L     I+  +  D                                                   G P+V   ++VP  + G IIG+GG+ I+     S A + + +++ ++   N+RT+TITG + CV  AV L+   L E P      +    YS      + GG             P   G       Q       T++ V IPD+L+GAV+GRGG  I E++  SG  I +S RDDF  GTRNR + ISG+    Q A+YLL Q L+
Sbjct:   48 KFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAILQVLHLIITKLVADGEG--------------------------------------------IDRMGQPQVA--LVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTIDCVLRAVALVATTLCEDPAYATLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATPRRYGA-----GQGGGRDDETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVVISGSAEGVQMANYLLTQKLS 325          
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Match: L5KQ31_PTEAL (RNA-binding protein Nova-2 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=L5KQ31_PTEAL)

HSP 1 Score: 134 bits (336), Expect = 8.610e-31
Identity = 100/313 (31.95%), Postives = 154/313 (49.20%), Query Frame = 3
Query:  741 KLMLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSGSIESVLDACGRILHSIHTDDRAGXXXXXXXXXXXXXXXDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEMNLSSGARVSMGSK-ELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPVLYTNMTPLYSAADVPGGTIPTAQGLPTDVL-AQALSGPPTTTM-QVGIPDNLVGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQAAHYLLGQ 1670
            K+++ S  AG++IGKGGQ+I +LQ  T AT+++S +   +PGT +RVCLV G+ E++      I   +    +A                                               N       +++VP   AG IIG+GGA +K +   SGA V +  K E +   ER +T++G    V  AV  +V+K+ E P      N++    A  V       A G     L A+ L+      + ++ +P+NLVGA++G+GG  + E +  +GA I IS + +F+PGTRNR +TI+G+P ATQAA YL+ Q
Sbjct:   36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQA-------------------------------MTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 317          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1135.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1HYQ8_KLENI8.780e-3432.05RNA-binding protein Nova-1 n=1 Tax=Klebsormidium n... [more]
L8IMA2_9CETA1.960e-3333.01RNA-binding protein Nova-2 (Fragment) n=3 Tax=Laur... [more]
A0A836CIW2_9STRA2.330e-3330.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI0006D8E78A3.150e-3232.48RNA-binding protein Nova-2 n=1 Tax=Bos mutus TaxID... [more]
UPI002021856E3.570e-3131.79RNA-binding protein Nova-2 n=1 Tax=Myodes glareolu... [more]
D2I064_AILME4.400e-3132.52Uncharacterized protein (Fragment) n=4 Tax=Eutheri... [more]
A0A1S3GH48_DIPOR4.400e-3132.42RNA-binding protein Nova-1-like n=3 Tax=Boreoeuthe... [more]
A0A454Y0A2_OSTTA4.650e-3131.88Uncharacterized protein n=2 Tax=Ostreococcus tauri... [more]
A4RQR8_OSTLU5.280e-3131.91Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]
L5KQ31_PTEAL8.610e-3131.95RNA-binding protein Nova-2 n=2 Tax=Boreoeutheria T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1135contigP-wetherbeei_contig1135:775..3209 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog27679.XP_010349459.1
Preferred nameNOVA2
PFAMsKH_1
Model size2129
Max annot lvl33208|Metazoa
KEGG koko:K14944
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000381,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0019219,GO:0019222,GO:0031323,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043484,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0048024,GO:0050684,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1903311
Exons2
Evalue9.67e-34
EggNOG OGsKOG2191@1|root,KOG2191@2759|Eukaryota,38BV5@33154|Opisthokonta,3BBMF@33208|Metazoa,3D00T@33213|Bilateria,485X2@7711|Chordata,48WMT@7742|Vertebrata,3JEWK@40674|Mammalia,35NSF@314146|Euarchontoglires,4MKPP@9443|Primates
Ec32 ortholog descriptionK Homology domain
Ec32 orthologEc-14_001470.1
DescriptionK homology RNA-binding domain
Cds size987
COG categoryA
BRITEko00000,ko03041
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.8942015-UTR-P-wetherbeei_contig1135:774..11701683185907.8942015-UTR-P-wetherbeei_contig1135:774..1170Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1135 775..1170 -
1683185907.9334605-UTR-P-wetherbeei_contig1135:2463..32091683185907.9334605-UTR-P-wetherbeei_contig1135:2463..3209Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1135 2464..3209 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.9023805-CDS-P-wetherbeei_contig1135:1170..15551683185907.9023805-CDS-P-wetherbeei_contig1135:1170..1555Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1135 1171..1555 -
1683185907.917362-CDS-P-wetherbeei_contig1135:1861..24631683185907.917362-CDS-P-wetherbeei_contig1135:1861..2463Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1135 1862..2463 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1135.1.1prot_P-wetherbeei_contig1135.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1135 1171..2463 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1135.1.1

>prot_P-wetherbeei_contig1135.1.1 ID=prot_P-wetherbeei_contig1135.1.1|Name=mRNA_P-wetherbeei_contig1135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=329bp
MLNSSQAGNVIGKGGQSIKELQASTHATVRVSSNGATFPGTGDRVCLVSG
SIESVLDACGRILHSIHTDDRAGGGGGGGGGSGGDGGGDVGGGGGGSGSR
YGGGDYGGGGGDGAAAGGGNGSPEVVQRVLVPAPAAGSIIGRGGAVIKEM
NLSSGARVSMGSKELVVANERTMTITGPLICVQSAVILLVRKLAEGPTPV
LYTNMTPLYSAADVPGGTIPTAQGLPTDVLAQALSGPPTTTMQVGIPDNL
VGAVVGRGGAKIGELRTRSGAAINISGRDDFMPGTRNRILTISGTPLATQ
AAHYLLGQLLAAAANQNQQGGGSGGGGR*
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mRNA from alignment at P-wetherbeei_contig1135:775..3209-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1135.1.1 ID=mRNA_P-wetherbeei_contig1135.1.1|Name=mRNA_P-wetherbeei_contig1135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2435bp|location=Sequence derived from alignment at P-wetherbeei_contig1135:775..3209- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGACGCTGAGGGAAAGCGACCGGCAGACTCGGGAGGCGAAGATTC TTCAGCGAAGAGAGCTCGAACCGGGCCGGAGGAGCATGGTGCGTTGAAGA AATGAACGCGGCGAAATCTTGTGCTCGGGGCATCGTAACCAACCTCAATT GCGCCTGTGCCTGCCTGTCGTACTCTTCTCCTACTAGTGCCTATGCCGGC AGCCGCTGCTGCGTCGCCCAAGTCTGACACGGACTCCACCGCACTTGTCC CGAGCCGTCCCGCTTATGGTAAGCGACTATCCGAAACCTATGCTTTTGGC AATGTACGAAGAGAATCTGCTGTGGTTCTGTTGTCCAAATGGAGGCCATT TCGTGCCGTGTCCTCCGAGCAACCCCCAGTCTTTCTCTGACGTGACATCG ACCGCCGTTTCTGCCGCTGCACGCTCCGTTCCTTTCTGCCGCTGTTGCGA ACCTCGCCACAAAACAACACACCCCTCCTATCACCATCCCATCTTCCTTC GTTCCATCGCTACCAAACCAACCACACCGCCCATACCTTGCAGCACAACC CCGGAAAGCCCCCGTGAGACCACCGCCCCTCTCCCCTACCGCCATCACAC GCCCACCATGAGGACACCACCAGCCCCAGCCCAAACCCGAGCCCCGCCAC CCCTGTTCCATCCCACACAACCTGCCCTCATTTTCCAACCATTCGGCCTT TCCAGAGCACACGCGCCCTGCGCCGCCGACATCGGCCTTTAAGCTGATGC TGAACTCGTCCCAGGCCGGCAACGTCATCGGCAAGGGCGGCCAGAGCATC AAAGAGCTGCAGGCGTCGACCCACGCCACCGTCCGCGTCTCATCAAACGG CGCCACTTTCCCCGGCACCGGCGACCGCGTCTGCCTCGTCTCGGGCAGCA TCGAGAGCGTCCTCGACGCGTGCGGCCGGATTCTGCATTCCATCCACACC GACGACCGGGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCGGCGA CGGCGGTGGCGATGTCGGCGGCGGTGGTGGCGGCAGTGGCAGCAGATACG GCGGCGGCGACTACGGCGGTGGCGGCGGCGACGGCGCGGCCGCCGGCGGC GGCAACGGCAGCCCGGAGGTCGTGCAGCGGGTGCTGGTGCCGGCGCCGGC GGCAGGCTCCATCATCGGGCGCGGCGGTGCAGTCATCAAGGAGATGAACC TGTCGTCGGGCGCCCGCGTGAGCATGGGTTCGAAGGAGCTGGTGGTGGCC AACGAGCGAACCATGACCATCACCGGGCCGCTGATTTGCGTGCAGAGCGC CGTCATCCTGCTGGTTCGGAAACTCGCTGAGGGCCCGACGCCCGTCCTGT GAGAAAATTTGAACTTGCCTCGGAAATTAATTTGGTAGCTGACGGGCGGA TGAAGCTTTTCATGCTGTCCTGCACTTTCTGTCCTGTACTGGTTGCTTTT TGGGATGATACGGCTTTTGCATGTGACCGGTACACCTGTGCCATTGTAAG TTCGCTGTGGCGATGAGCTTTCTGCTTCGGTATACTGTTTGAAATTAATT TGAGCAGTCACGACTAAGAGCTCGAAAGTTCGCTGCCTTGTGAAAACCGC CTCACCAGCCGCCTAACAAATCGATCAACCGCCCACATCGATGGATCGCT GCAGGTACACCAACATGACGCCGCTGTACTCGGCGGCGGACGTGCCTGGC GGCACCATTCCAACGGCGCAAGGCCTCCCAACAGATGTCCTTGCCCAGGC GCTGTCCGGCCCGCCTACCACAACCATGCAGGTCGGCATCCCGGACAACC TGGTGGGCGCCGTCGTTGGCCGCGGCGGCGCTAAGATCGGCGAGCTGCGG ACACGGTCGGGCGCGGCGATCAACATCAGCGGCCGCGATGACTTTATGCC CGGCACGCGGAACCGCATCCTGACCATTTCGGGGACGCCACTGGCGACGC AAGCAGCGCACTACCTGCTCGGCCAGCTGCTGGCGGCCGCCGCCAACCAG AACCAGCAGGGCGGCGGCAGCGGTGGCGGCGGCCGTTGAGTTGGGTGGTG GGGCAGCCCGCCGGAGCGGCAGTGGCGGGAGGGGTGACTGATGATGGCGG CGGCGATGGCGGCGGCGGCGGTGGCGGCGGCGCTGGCGCGATTGGGGCAA AATAAGCGATGGCAATCAGTCTGTGGCAATGTCTGCTGTAGTCGAAGCGG CAGCGTTGCTGAGGAACAGCCCTCACAGCAGTGTGCTGTCGAGGCTGACG TGGCCCCGCATCAGCTGAAGCACGTTAACTCTGTCACAGCACCGCGGCGT TTGCGGCTGCTTGCCGGTGTCCGTAGCGACACTAGTGAAAAGTTGCCGTG GGGTGTGACAAAGTGACAAATGGATATTGATGGAGAGGGAAAGAAGAACA TATACAGCGAGGGGGTTAACAAGAGCTTGTTACTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1135:775..3209-

>mRNA_P-wetherbeei_contig1135.1.1 ID=mRNA_P-wetherbeei_contig1135.1.1|Name=mRNA_P-wetherbeei_contig1135.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=987bp|location=Sequence derived from alignment at P-wetherbeei_contig1135:775..3209- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGAACTCGTCCCAGGCCGGCAACGTCATCGGCAAGGGCGGCCAGAG
CATCAAAGAGCTGCAGGCGTCGACCCACGCCACCGTCCGCGTCTCATCAA
ACGGCGCCACTTTCCCCGGCACCGGCGACCGCGTCTGCCTCGTCTCGGGC
AGCATCGAGAGCGTCCTCGACGCGTGCGGCCGGATTCTGCATTCCATCCA
CACCGACGACCGGGCCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCGGCG
GCGACGGCGGTGGCGATGTCGGCGGCGGTGGTGGCGGCAGTGGCAGCAGA
TACGGCGGCGGCGACTACGGCGGTGGCGGCGGCGACGGCGCGGCCGCCGG
CGGCGGCAACGGCAGCCCGGAGGTCGTGCAGCGGGTGCTGGTGCCGGCGC
CGGCGGCAGGCTCCATCATCGGGCGCGGCGGTGCAGTCATCAAGGAGATG
AACCTGTCGTCGGGCGCCCGCGTGAGCATGGGTTCGAAGGAGCTGGTGGT
GGCCAACGAGCGAACCATGACCATCACCGGGCCGCTGATTTGCGTGCAGA
GCGCCGTCATCCTGCTGGTTCGGAAACTCGCTGAGGGCCCGACGCCCGTC
CTGTACACCAACATGACGCCGCTGTACTCGGCGGCGGACGTGCCTGGCGG
CACCATTCCAACGGCGCAAGGCCTCCCAACAGATGTCCTTGCCCAGGCGC
TGTCCGGCCCGCCTACCACAACCATGCAGGTCGGCATCCCGGACAACCTG
GTGGGCGCCGTCGTTGGCCGCGGCGGCGCTAAGATCGGCGAGCTGCGGAC
ACGGTCGGGCGCGGCGATCAACATCAGCGGCCGCGATGACTTTATGCCCG
GCACGCGGAACCGCATCCTGACCATTTCGGGGACGCCACTGGCGACGCAA
GCAGCGCACTACCTGCTCGGCCAGCTGCTGGCGGCCGCCGCCAACCAGAA
CCAGCAGGGCGGCGGCAGCGGTGGCGGCGGCCGTTGA
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