mRNA_P-wetherbeei_contig11348.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11348.1.2
Unique NamemRNA_P-wetherbeei_contig11348.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A836CB41_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB41_9STRA)

HSP 1 Score: 173 bits (439), Expect = 6.220e-49
Identity = 102/197 (51.78%), Postives = 134/197 (68.02%), Query Frame = 3
Query:  180 MLSISQAKPKDFGDVANFFIQSFFGD---VKQGQAQQLEREQITDMTELYGGDL-PR--PSALFVARE-GGRILGCVGVEAAVCQGDRVGLRARGAAAFAAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLAP 749
            M++I QA      +VA+FF+ SF+G    +K+GQ +QL  EQ  D+ E YG  + PR  PSAL VAR  GG ++GCVGVE  VC+G+RVG++ +G  A    ELRPLLSNLAV+P  RR+G+G++LV  CEA  + WGY ELLLLV+  N+ A RLY K+GY+ LF +     VEVT  QIRN+ CT +C+R  LAP
Sbjct:   78 MITIEQASNDQIEEVASFFVDSFWGAGTLLKEGQRRQLLTEQRRDLRERYGELIVPRKLPSALLVARSAGGDMVGCVGVEVVVCEGERVGVKYKGQGANDP-ELRPLLSNLAVSPTVRRKGIGQKLVRACEAKVKSWGYAELLLLVNETNSPARRLYSKLGYKDLFTNTSGTTVEVTSFQIRNSPCTTVCMRAGLAP 273          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A4D9D480_9STRA (N-acetyltransferase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D480_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.270e-27
Identity = 87/254 (34.25%), Postives = 122/254 (48.03%), Query Frame = 3
Query:  138 PRVATSQRCHHSVSMLSISQA-KPKDFGDVANFFIQSFFGD--VKQGQAQQLEREQITDMTELY-------GGDLPR---------PSALFVAREGGRILGCVGVEAAVCQ------------GDRVGLRARGAAAFAAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLAPGSGGKVSGGGSPVFAEGLM 806
            PRV T          + +S+   P +   +++FF+ SF+     K  Q +QL+ E   D+T  Y       G   P           SAL VA+EGG+++GC G+E  V +            GD  G             L P+L+NLAV    RR+GVG++++  CE   +GWG+ E+ L+VD  N  A  LYEK GYEL+  D   M+V  T  Q++    TNLC+RK L  G GG   G G   F  GL+
Sbjct:   46 PRVTTDLTALRPQYAIRVSRVTNPAEAEGISDFFVSSFWDTPITKPRQREQLKSEVYRDLTARYISGAGKSGASSPAGSRMGAARGKSALLVAKEGGKVVGCGGLETRVIREGLVTKYEVVKRGDPPGT-----------SLGPVLANLAVDRTLRRKGVGKKILMECERVVKGWGFQEVWLVVDEKNKPARALYEKNGYELMARDPRGMKVVPTEWQLKEMPVTNLCMRKDLRKGKGG--GGAGLGEFFAGLL 286          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A7S0JEC8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JEC8_9EUKA)

HSP 1 Score: 97.1 bits (240), Expect = 7.270e-20
Identity = 71/180 (39.44%), Postives = 91/180 (50.56%), Query Frame = 3
Query:  213 FGDVANFFIQSFFGDVKQGQAQQLEREQITDMTELYGGDLPRPSALFVARE--GGRILGCVGVEAAVCQGDRVGLRARGAAAFAAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLA 746
            F  V+       F    + +   L RE   ++   +       +ALFVA +   G I+   G+E  V Q D  G  AR A    +   RPLLSNL V P  RR+G+ RRLV  CEATAR WGY ELL+ V+  N+ A RLY   GY LL  D  A + +    ++R    TNL LRK LA
Sbjct:   60 FDQVSTLCANHLFSPASRREEVLLTREMRRNLVTRFSAASLHRNALFVAEDVLSGEIVASCGLE--VSQLDADGRAARFADELLSCSERPLLSNLVVVPQFRRQGIARRLVRTCEATARRWGYDELLIKVERGNSGAERLYAACGYALLAVDTRAEKPQAGRWRVRWVPTTNLVLRKRLA 237          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A836C8B6_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B6_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.530e-19
Identity = 53/130 (40.77%), Postives = 75/130 (57.69%), Query Frame = 3
Query:  462 AELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLAPGSGGKVSGGGSPVFAEGLMARLFGR*WRSLRRPS 851
            A++RP++SNLAV+P  RR G+G  L+  C+     WGY EL+L V+  NA A   Y++MG++ LF DR A R + +   ++N RC+ L LRK L   SG +V    +     GL A       R LRRP+
Sbjct:    8 ADVRPVISNLAVSPRMRRFGIGSSLLKACQEEVLSWGYQELVLQVEEDNAGARAFYQRMGFDTLFVDRAARRYDTSGFLLQNVRCSKLTLRKLLPQSSGARVPQSSAQQSGMGLSAFFD----RFLRRPA 133          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A7S3CH37_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CH37_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 1.060e-18
Identity = 74/215 (34.42%), Postives = 109/215 (50.70%), Query Frame = 3
Query:  183 LSISQAKPKDFGDVANFFIQSFFGDVKQG-------QAQQLEREQITDMTELYG-----GDLPRPSALFVARE-----GGRILGCVGVEAAVCQGDRVGLRARGAAAFAA---------AELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLAP 749
            L + +A+  DF  V+N  +++F+ D K         Q + LER+Q  D+   YG     G     SA+ VA E       R LGCV +      GD+  L  R   ++            ELRP+++NLAV P ARRRG+ ++L++RCE     WGY E+ LLV+  N  A RLY K+GY+   E+      ++   ++R    TN+ +RKSL P
Sbjct:   55 LDVYEAELGDFQMVSNLLVEAFYTDTKDEENNLSAMQRRGLERDQNLDLRARYGRATKEGKGLIRSAILVAGEVDGEGSERDLGCVALGTTPFNGDQAQLSIRDLYSYTNRAGSNQQDDVELRPVVANLAVRPEARRRGIAKKLMSRCERVCAEWGYQEIWLLVEKDNPKARRLYRKLGYKERREEEDDS-YKLVEGKLRQVDVTNVYMRKSLRP 268          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A7S2BEF0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BEF0_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.800e-17
Identity = 67/191 (35.08%), Postives = 98/191 (51.31%), Query Frame = 3
Query:  279 QLEREQITDMTELYG---GDLPRPSALFVAREGGRILGCVGVEAA----VCQGDRVG-----------------------LRARGAAAF------AAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSL 743
            QLER+Q+ D    YG   G     +AL VA+EG RI+GCV V       +  G R+G                         A+G+           +E  PL++NLAVA  AR++G+G RL    E  A G+GY E++LLV+ +NA A++LY K+GY+ L+    A +++VT   +R  R TN+ + K L
Sbjct:    1 QLERDQLRDWNRRYGSEGGGSGSEAALLVAKEGRRIVGCVSVSVGSYSRILDG-RIGGGXXXXXXXXDPRSXXXXXXXXSSSAKGSKGALPDLNRVRSEDVPLVANLAVAKRARKKGIGARLAREAERLAEGYGYPEIVLLVEESNAPAVKLYRKLGYKELWRVGNAPKIDVTTGSVRTVRTTNVAMAKPL 190          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A7S0L025_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L025_9EUKA)

HSP 1 Score: 87.4 bits (215), Expect = 2.630e-16
Identity = 64/186 (34.41%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  213 FGDVANFFIQSFFGDVKQGQAQQLEREQITDMTELYGGDLPRPSALFVARE---GGRILGCVGVEA------AVCQGDRVGLRARGAAAFAAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSL 743
            F   A+   +S F    Q +   L      D++  +       +AL +A +   GG + GCVG+EA      A   GD +             E+RPLLS+LAV  A RR+G+ RRL A+ EATAR WGY E+LL V+  N  A+ LY K+GY  +  +    + + T  ++R    TN+ +RK L
Sbjct:   73 FNWAASVSAESIFEPESQQELAVLAGALSADLSTRFSSRARNKNALILAIDEDGGGDVAGCVGIEACLLTPTAQANGDTL-------------EMRPLLSSLAVDSAYRRKGLARRLCAQAEATARSWGYYEVLLKVEKGNKRALNLYRKIGYRQVGIEANGEKPDATSGRLRFVPTTNIVMRKDL 245          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: C1E2G6_MICCC (N-acetyltransferase domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E2G6_MICCC)

HSP 1 Score: 85.5 bits (210), Expect = 1.390e-15
Identity = 73/246 (29.67%), Postives = 123/246 (50.00%), Query Frame = 3
Query:  126 AAPLPRVATSQRCHHSVSMLSISQAKPKDFGDVANFFIQSFFGDVKQGQAQQLEREQITDMTELYGGDLPRP------SALFVAREG--GRILGCVGVEAAVCQGDRVGLRARGAAAFAAAELRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLF--EDRMAMRVEVTPVQIRNARCTNLCLRKSLAPGSGG--------KVSGGGSPVFAEGLMA 809
            A  LPR  T        +   I +A+ +D+   A  F+++FF   K G A  + + ++  +      D+          A++V R+   G+++GCVG +    +G     RA  A     A+ RP+++NLA APAARRRG+ ++L+AR E   + WG+ E +L+V++ N+ A  LY K+GY+ +    D   + ++    ++ N     + +RKSL  G+GG        K+ G G+ V A    A
Sbjct:   41 AVSLPRRRTPASNVARAAFGEIERARGQDYASAAEVFVEAFFLR-KGGAADVITKSELAYLNGAQKRDMVGRYNKRGLCAMYVIRDDDTGKVVGCVGADVQTFKGTVPVKRATDATKGEVAD-RPVIANLATAPAARRRGLAKKLMARIEEECKEWGFEEAVLVVEANNSKARSLYSKLGYKAIGGEPDTPNIVIDRETGKVVNGAVKTVFMRKSLKEGAGGVLENIDVTKLVGVGAAVAAAAKFA 284          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: A0A7S1H1Q1_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H1Q1_HEMAN)

HSP 1 Score: 77.8 bits (190), Expect = 8.590e-13
Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  258 VKQGQAQQLEREQITDMTELYG---GDLPRPSALFVAR-EGGRILGCVGVEAAVCQGD--RVGLRARGA-------AAFAAAE----------------------LRPLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYE 647
            + + Q   LE+ Q  DM+E YG   G     S LFV+R + G +  C GVE AV      +V  R +G        AA +A E                      L P+LSNLAV   AR +G+G+++V +CE  A+ WG+GE+LLLV+++N AA+ LY+K+GY+
Sbjct:   99 LSEAQRAALEQVQEGDMSERYGKLVGKRKLMSELFVSRGDDGMVEACAGVEVAVADRTTGQVLKRNKGEELLTGSLAAMSARERNTLRRVSLTELADAVLPSNLGLVPVLSNLAVGSEARGQGLGQQMVQQCEDAAKSWGFGEMLLLVEASNVAAVSLYKKLGYQ 263          
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Match: R1FC24_EMIHU (N-acetyltransferase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FC24_EMIHU)

HSP 1 Score: 76.6 bits (187), Expect = 1.630e-12
Identity = 72/194 (37.11%), Postives = 91/194 (46.91%), Query Frame = 3
Query:  279 QLEREQITDMTELYG---GDLPRPSALFVARE--GGRILGCVGVEAAVCQGDR-------------------VGLRARGA-AAFAAAELRP----------LLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIRLYEKMGYELLFEDRMAMRVEVTP----VQIRNARCTNLCLRKSL 743
            QL   Q  DM   YG   G     S+LFVA +   G I GCVGVE A+    R                   +G R RG     +AAEL            LL+NLAVAPAAR  G+GRRL ARC+  A  W    ++L V+ ANA A +LYE  GY  +F D  A  + V P    +Q+ +   T L + K +
Sbjct:   80 QLAALQRDDMIARYGETVGARRLRSSLFVAEDPSSGAIAGCVGVEMALVDPSRGRVLSRAQSEKLFSDELNSMGARERGTYRKMSAAELTEALFPEYKCLALLANLAVAPAARGSGLGRRLCARCDEAADDWELPAIMLQVELANAPARKLYEAAGYRAVFADEGASALRVKPGGAELQLESVPSTLLLMGKGV 273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11348.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB41_9STRA6.220e-4951.78Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus... [more]
A0A4D9D480_9STRA9.270e-2734.25N-acetyltransferase domain-containing protein n=2 ... [more]
A0A7S0JEC8_9EUKA7.270e-2039.44Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A836C8B6_9STRA2.530e-1940.77N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S3CH37_9CHLO1.060e-1834.42Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A7S2BEF0_9STRA1.800e-1735.08Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0L025_9EUKA2.630e-1634.41Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
C1E2G6_MICCC1.390e-1529.67N-acetyltransferase domain-containing protein n=1 ... [more]
A0A7S1H1Q1_HEMAN8.590e-1336.97Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
R1FC24_EMIHU1.630e-1237.11N-acetyltransferase domain-containing protein n=2 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11348contigP-wetherbeei_contig11348:214..2111 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FR70
PFAMsAcetyltransf_1
Model size922
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue7.41e-42
EggNOG OGs2CZ1H@1|root,2S7TP@2759|Eukaryota
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-08_005180.1
DescriptionAcetyltransferase (GNAT) family
Cds size804
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11348.1.2prot_P-wetherbeei_contig11348.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11348 309..2088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.7627604-UTR-P-wetherbeei_contig11348:213..3081683185907.7627604-UTR-P-wetherbeei_contig11348:213..308Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11348 214..308 -
1683185907.8131824-UTR-P-wetherbeei_contig11348:2088..21111683185907.8131824-UTR-P-wetherbeei_contig11348:2088..2111Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig11348 2089..2111 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.7719383-CDS-P-wetherbeei_contig11348:308..4881683185907.7719383-CDS-P-wetherbeei_contig11348:308..488Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11348 309..488 -
1683185907.7802534-CDS-P-wetherbeei_contig11348:929..12411683185907.7802534-CDS-P-wetherbeei_contig11348:929..1241Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11348 930..1241 -
1683185907.7887018-CDS-P-wetherbeei_contig11348:1550..16131683185907.7887018-CDS-P-wetherbeei_contig11348:1550..1613Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11348 1551..1613 -
1683185907.7989523-CDS-P-wetherbeei_contig11348:1735..18191683185907.7989523-CDS-P-wetherbeei_contig11348:1735..1819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11348 1736..1819 -
1683185907.805997-CDS-P-wetherbeei_contig11348:1923..20881683185907.805997-CDS-P-wetherbeei_contig11348:1923..2088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11348 1924..2088 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11348.1.2

>prot_P-wetherbeei_contig11348.1.2 ID=prot_P-wetherbeei_contig11348.1.2|Name=mRNA_P-wetherbeei_contig11348.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=268bp
MGTKRPDKSGLSFVFLMLFFLVLAAALQLCAALVAAPLPRVATSQRCHHS
VSMLSISQAKPKDFGDVANFFIQSFFGDVKQGQAQQLEREQITDMTELYG
GDLPRPSALFVAREGGRILGCVGVEAAVCQGDRVGLRARGAAAFAAAELR
PLLSNLAVAPAARRRGVGRRLVARCEATARGWGYGELLLLVDSANAAAIR
LYEKMGYELLFEDRMAMRVEVTPVQIRNARCTNLCLRKSLAPGSGGKVSG
GGSPVFAEGLMARLFGR*
back to top

mRNA from alignment at P-wetherbeei_contig11348:214..2111-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11348.1.2 ID=mRNA_P-wetherbeei_contig11348.1.2|Name=mRNA_P-wetherbeei_contig11348.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1898bp|location=Sequence derived from alignment at P-wetherbeei_contig11348:214..2111- (Phaeothamnion wetherbeei SAG_119_79)
TCTTCCTCCATTGTTCTTTGCGCATGGGAACGAAACGGCCGGACAAGTCA GGTCTTTCCTTTGTGTTTCTCATGCTCTTCTTCCTTGTTCTCGCGGCCGC ATTGCAACTATGCGCGGCGCTGGTAGCGGCTCCTTTGCCCCGGGTGGCGA CGTCTCAGAGATGCCACCACTCCGTCAGCATGCTCTCGGTGAGCATGTTT CACTGAGAGTCAGCTGACCTACAATCTCTTTTCCGAATATGCGATGCACT GCCGCTAAGAACAATGCCGTCTTTTCCTCTTTCGGATCGCAGATTAGCCA GGCAAAGCCCAAAGACTTCGGAGACGTCGCAAATTTCTTCATTCAGTCAT TCTTCGGGGACGTCAAGCAAGGACAGGTTTGACAAAAGATTTTGAGTATA AACTTTGTTGCGTTGTAGAAAGCCACACGTTTCCCTTTGATAATTCAGTC TGCTAGTCAAAACCAACGACCACGACTTTTATCTTTTCTTCGGCCCAGGC CCAGCAGCTTGAGCGTGAGCAGATTACAGACATGACGGAACTATACGGCG GCGATCTCCCGGTCAGGACAGCTTTTGACGAATCATTTTTACAGTGTAGT GTTCTCTCTCATGGTTTCATTGCACTCCCCTCCCTCCCCCCCCCCCCCCC TCTCTGCCAACCCCTTCTCTTTTGTTTTCTTTTTTTTTTTTNNNNNNNNN NTACCTGTTGGTTTGCCTCCTCGTAGTTTCACTTCCCTCCCCCCCCCCCC CCCCCCCCCGACTGTTAAACCTGGAGTTAATTTTCTGTTTTCTTTCGAAT CTTTTTCTAGAGGCTCTTCAACCGGGTCCGCATCGCCGCCCGCCTTTTCC CTGGCTGTGCGCGCCCGCAGCGGCCGAGCGCGCTGTTCGTAGCGCGGGAG GGCGGCAGAATACTCGGCTGCGTCGGCGTCGAGGCGGCCGTATGCCAGGG CGACCGCGTTGGGCTCCGGGCGCGCGGCGCCGCCGCCTTCGCCGCGGCGG AGCTCCGGCCGCTGCTTTCCAACCTGGCAGTGGCGCCGGCGGCGCGGCGG CGGGGCGTCGGCCGCCGGCTGGTGGCGCGCTGCGAGGCGACGGCGCGGGG GTGGGGCTACGGCGAGCTGCTATTGCTCGTGGACTCCGCCAATGCCGCGG CCATCCGGCTCTACGAGAAGATGGGATACGAGGTGAGTGAGTTGCTTGCG AGCTGAGCGGGCAGGCTGGAGCGGGCCGAGAAAGCTGCGTGCGTGCGTCG ACGGTGGCGCCGCCGGCTGACCGGCCGGCCCGCATTGTGGTGCGAAGCAC CCATTGGTCGATTTCGTGGGTAACTGTGTGCGGCTTGGCAGGACAGTGTG CTCAATACGTAGAGGAGGTGGAGAGGAGTGTGGATGAAAGAGACGGGCAG GATGATCCTGTGAACGTAACATGGTTTCCGATCTCATTTCCCACCGGCCT ATGTTGGGCTTGGCTAGTAAGCTTCTGTATTTCCCATCCTGGCGGGACCT TAACCTTTTCGCCGAAAATTACCACGGCTTGATAAGAAGGAATCGGGCCA ACAATTTGCCTGCCCACTATGCCAACACTTTGTTTGCTCAACTGTGTCCG CGCTGCCGCCTGGCTGTCCGCAGCTGTTGTTCGAGGACCGCATGGCGATG CGGGTGGAGGTGACGCCGGTTCAGATACGGAACGCCCGCTGCACCAACCT CTGCCTGCGCAAGTCGCTGGCGCCGGGATCCGGCGGCAAGGTGAGCGGCG GCGGGTCGCCGGTGTTCGCCGAAGGTCTGATGGCACGTCTCTTCGGCCGG TGATGGCGCAGTTTGCGCCGCCCGTCGCAGATAGGTGCTGCGCTGACGCT GGATCCTCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGGTGGTGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig11348:214..2111-

>mRNA_P-wetherbeei_contig11348.1.2 ID=mRNA_P-wetherbeei_contig11348.1.2|Name=mRNA_P-wetherbeei_contig11348.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=804bp|location=Sequence derived from alignment at P-wetherbeei_contig11348:214..2111- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGAACGAAACGGCCGGACAAGTCAGGTCTTTCCTTTGTGTTTCTCAT
GCTCTTCTTCCTTGTTCTCGCGGCCGCATTGCAACTATGCGCGGCGCTGG
TAGCGGCTCCTTTGCCCCGGGTGGCGACGTCTCAGAGATGCCACCACTCC
GTCAGCATGCTCTCGATTAGCCAGGCAAAGCCCAAAGACTTCGGAGACGT
CGCAAATTTCTTCATTCAGTCATTCTTCGGGGACGTCAAGCAAGGACAGG
CCCAGCAGCTTGAGCGTGAGCAGATTACAGACATGACGGAACTATACGGC
GGCGATCTCCCGCGGCCGAGCGCGCTGTTCGTAGCGCGGGAGGGCGGCAG
AATACTCGGCTGCGTCGGCGTCGAGGCGGCCGTATGCCAGGGCGACCGCG
TTGGGCTCCGGGCGCGCGGCGCCGCCGCCTTCGCCGCGGCGGAGCTCCGG
CCGCTGCTTTCCAACCTGGCAGTGGCGCCGGCGGCGCGGCGGCGGGGCGT
CGGCCGCCGGCTGGTGGCGCGCTGCGAGGCGACGGCGCGGGGGTGGGGCT
ACGGCGAGCTGCTATTGCTCGTGGACTCCGCCAATGCCGCGGCCATCCGG
CTCTACGAGAAGATGGGATACGAGCTGTTGTTCGAGGACCGCATGGCGAT
GCGGGTGGAGGTGACGCCGGTTCAGATACGGAACGCCCGCTGCACCAACC
TCTGCCTGCGCAAGTCGCTGGCGCCGGGATCCGGCGGCAAGGTGAGCGGC
GGCGGGTCGCCGGTGTTCGCCGAAGGTCTGATGGCACGTCTCTTCGGCCG
GTGA
back to top