mRNA_P-wetherbeei_contig11345.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835Z303_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z303_9STRA) HSP 1 Score: 146 bits (368), Expect = 3.130e-35 Identity = 81/171 (47.37%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 733 HSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDVVSSLRLAGFTAPVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEICN-EQVPSQELTVEYMFYDTADGSPTVLQDADYAE 1242 H+ EG KRQ KQ+ R+ NLLKE GY VDEE I +YGGC+PD +RH ARLD I+ TS ILI+E DEE H YL++CE +RM+ V ++ G+T PV F+RY+PNG D V + R++RE L L + + +QV + L + Y+ Y T G PTV +D D+ E Sbjct: 342 HTKEGAKRQLKQQMRVANLLKEAGYTVDEECTI--QYGGCVPDPDRHRARLDIYIVTITSCILIVEVDEEAHASYLVSCELTRMLQVHEAILSRGYTVPVVFVRYNPNGCITKDGVCIKMTREEREVVLLEFLGRVRDGQQVFQEPLNLVYLCYPTTYGLPTVCEDTDFDE 510
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835YQ85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ85_9STRA) HSP 1 Score: 143 bits (360), Expect = 9.160e-35 Identity = 80/171 (46.78%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 733 HSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDVVSSLRLAGFTAPVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEI-CNEQVPSQELTVEYMFYDTADGSPTVLQDADYAE 1242 HS EG KRQ KQ+ R+ +LKE GY VDEE I +Y GC+PD +RH ARLD ++ TS ILI+E DEE H YL++CE +RM+ + ++ G+T PV F+RYSPNG D V + RK+RE AL L + +QV + L + Y+ Y TA+G PTV +D + E Sbjct: 242 HSKEGAKRQLKQQMRVVKVLKEAGYTVDEECTI--QYTGCVPDPDRHHARLDVYVVTITSCILIVEVDEEAHASYLVSCEITRMLQMHEAILTRGYTVPVVFVRYSPNGAITRDGVYFEMTRKEREVALLEFLGRVRAGQQVFEEPLNLVYLCYPTANGLPTVCEDPHFDE 410
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835Z5S0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S0_9STRA) HSP 1 Score: 102 bits (255), Expect = 5.170e-22 Identity = 68/183 (37.16%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 763 KQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDVVSSLR---------LAGFTA-------PVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEIC-NEQVPSQELTVEYMFYDTADGSPTVLQDADYAEMLAKCV 1260 K+++RLR +L E Y VD E I + GGC+P+A++H AR+DF ++ I+I+ECDE H YL+ CE +RM V + +AG T PV F+R++P+ VD RKDRE AL L+E+ ++V ++ L + Y+ YD G P+V +D DY+E + CV Sbjct: 6 KKQDRLRQVL-EAVYTVDRECHIRYE-GGCVPNADKHHARVDFHVVGIVHLIVIIECDEGGHVDYLVRCELTRMEQVHEGVLKAHAQIAADMAGETEALQIPCPPVLFVRFNPDNC-TVDGAKVQNRRKDREAALMRFLNEVALGQRVFTETLNIVYIGYDMEGGEPSVCKDPDYSEQMKACV 185
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835YYJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYJ7_9STRA) HSP 1 Score: 102 bits (253), Expect = 3.580e-20 Identity = 66/184 (35.87%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 718 HILKHHSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDVVSSLRLA--GFTAPVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEICNEQVPSQE-LTVEYMFYDTADGSPTVLQDADYAEMLAKCV 1260 HI H+ EG ++ +++R+R +L+E Y VD E I + GC+PD ++H AR+DF I+ T I+I+ECDE H Y++ CE SRM + ++ A PV F+RY+P+ +D Q R+++E L T LS++ V E L + Y+ YD P V D D+ E + CV Sbjct: 209 HIQCWHTKEGKAKKITKQDRVRQILEEV-YAVDSECHIKYR-NGCVPDPDKHYARIDFHIVGITHTIVIVECDEGGHADYMLTCELSRMEQIHEAILKACPDGAPPVLFVRYNPD-MRTIDGTPQATKRREKESELMTFLSDVAEGNVVFTETLNIAYLGYDMEGCVPCVCNDPDFPEQMKGCV 389
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835YKM9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM9_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.100e-19 Identity = 66/202 (32.67%), Postives = 107/202 (52.97%), Query Frame = 1 Query: 709 LTTHILKHHSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRM--------------MDVVSSLRLAGFTA--PVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEICNEQVP-SQELTVEYMFYDTADGSPTVLQDADYAEMLAKCVI 1263 + H + H+ EG++ + ++++RLR +L E Y VD E I K GGC+PD ++ C+RLDF ++ T+ I+I+ECDE +H Y++ CE SRM M V A T PV F+RY+P+ +VD V + R +E + + LS+I + + L + Y+ Y T P V D D++ + C++ Sbjct: 1 MQKHYQRWHTKEGMESKIRKQDRLRKVL-EGTYAVDSECHIRYK-GGCVPDPDKFCSRLDFHVVGITNAIVIVECDENEHNDYVLRCELSRMEQAHEGVIKGQFAEMKAVKGEATAMATPLRPVVFVRYNPD-CRMVDGVGEKRSRASKEADMMSVLSDIESGVLALPHPLNLVYVNYSTYHHKPVVSYDPDFSPQMRACIV 199
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835Z3M2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3M2_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.770e-18 Identity = 62/194 (31.96%), Postives = 104/194 (53.61%), Query Frame = 1 Query: 733 HSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDVVSSLRLAGFTA----------------PVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEICNEQVP-SQELTVEYMFYDTADGSPTVLQDADYAEMLAKCVI 1263 H+ EG +++ ++++R+R +L E Y VD E + + GGC+PD ++ CAR+D+ ++ T+ I+I+ECDE+ H Y + CE SRM + ++ A F+ PV F+R++P+ + VD + R DRE L L +I + + L + Y+ Y DG P V D D+A + CV+ Sbjct: 226 HTVEGQQKKIRKQDRVRQVL-ESAYTVDSECHVRYQ-GGCVPDPDKFCARIDYHVLGITNAIVIVECDEQGHKDYTLTCELSRMEQIHEAIIKANFSMVVAKAGEAYALTASMKPVVFVRFNPD-PWKVDGEKELSRRCDREAVLLEVLQDISDGTLELPHPLNLVYIGYSMLDGEPVVCGDPDFAPQMRGCVV 416
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Match: A0A835ZGJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.310e-18 Identity = 65/195 (33.33%), Postives = 104/195 (53.33%), Query Frame = 1 Query: 733 HSAEGIKRQKKQENRLRNLLKEWGYNVDEELVINAKYGGCMPDAERHCARLDFVIIECTSRILILECDEEQHFWYLINCECSRMMDV------------------VSSLRLAGFTAPVHFLRYSPNGTYLVDEVSQNVPRKDREEALKTRLSEI-CNEQVPSQELTVEYMFYDTADGSPTVLQDADYAEMLAKCV 1260 H+ EG+ ++ ++++RLR +L E Y V+ E + GGC+PD ++H AR+DF I+ T ++I+ECDE H YL+ CE +RM V V +LR+A PV F+R++P+ VD V +K++E L L+E+ C + + L + Y+ Y + G P V D DY+ + CV Sbjct: 263 HTKEGMAKKIRKQDRLRQVL-EAVYAVNTECHVRY-IGGCVPDPDKHYARIDFHILGITQVVVIVECDEGGHKDYLLRCELTRMEQVHEAILKAHTQATRKALGEVQALRIAA--PPVLFVRFNPDNC-AVDGVRVKATQKEKEGVLMRFLAEVACGTRAFDETLNIVYIGYSSEGGVPVVCNDPDYSAQMRACV 452 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11345.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11345.1.1 >prot_P-wetherbeei_contig11345.1.1 ID=prot_P-wetherbeei_contig11345.1.1|Name=mRNA_P-wetherbeei_contig11345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=422bp LAVHERLHSSKHRSCSFAGCDYICSQYTQMKIHEITHTAVYNCTVTECTFback to top mRNA from alignment at P-wetherbeei_contig11345:213..1478+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11345.1.1 ID=mRNA_P-wetherbeei_contig11345.1.1|Name=mRNA_P-wetherbeei_contig11345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1266bp|location=Sequence derived from alignment at P-wetherbeei_contig11345:213..1478+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11345:213..1478+ >mRNA_P-wetherbeei_contig11345.1.1 ID=mRNA_P-wetherbeei_contig11345.1.1|Name=mRNA_P-wetherbeei_contig11345.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1266bp|location=Sequence derived from alignment at P-wetherbeei_contig11345:213..1478+ (Phaeothamnion wetherbeei SAG_119_79)back to top |