mRNA_P-wetherbeei_contig11334.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig11334.2.1
Unique NamemRNA_P-wetherbeei_contig11334.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A831T7L6_9BACT (DUF1559 domain-containing protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A831T7L6_9BACT)

HSP 1 Score: 165 bits (417), Expect = 1.710e-45
Identity = 123/320 (38.44%), Postives = 171/320 (53.44%), Query Frame = 1
Query:   13 KRNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHL-FVVRLLDPPPPVGR-----GIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGV----RRPSFADPGWGDVTPVTVN--GVTRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEV 936
            +R G+S++E+LVV+ I+  ++  +LPAVQK RE+A++++S+NNLRQ+  A+HQ   D +G +     PA     E D       V +P+L      LD     GR      +Q ++P+ ISPADP                T+ +    G TSYA N  AF      P   RDGTS+T++  ERY    F  +P + F     SW    +    LP+ +      +RGV    RR +FAD   GDV PV     GVT  S+ G+TFQ+RP  +D D    QTP S+G+LV + DG VRT++  V+PEVFW AVT  GGEV
Sbjct:    2 RRRGVSMVELLVVIGILGTVLVLVLPAVQKLRESALKIESSNNLRQINLAIHQFAGDRSGKL-----PALNFGNE-DARESVFFVILPYLEHGSYYLDVK--AGRLSHTSSVQ-IKPF-ISPADP----------------TMADRFSYGTTSYALNALAFQQRMNLPRSFRDGTSNTLSLGERYA---FIRKPTEIFQN---SWFDQEE----LPTVV-----KSRGVTVTARRATFADRPLGDVYPVDSGTPGVTTGSIPGLTFQIRPRIEDCDPRLTQTPHSSGMLVGLMDGGVRTISRHVSPEVFWGAVTPSGGEV 280          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A354GU25_9BACT (Prepilin-type cleavage/methylation domain-containing protein n=1 Tax=Planctomycetales bacterium TaxID=2053591 RepID=A0A354GU25_9BACT)

HSP 1 Score: 158 bits (400), Expect = 8.870e-43
Identity = 125/325 (38.46%), Postives = 160/325 (49.23%), Query Frame = 1
Query:    1 TAVNKRNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQ--ERDETTDYLRVTI---------PHLFVVRLLDPPPPVGRGIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVT--VNGVTRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEV 936
            T V+ R G++L+EVLVV+AI+A L+  LL AVQ+ RE+A  +++ NNLRQ++ AVHQ   +  G I      + + +     D    Y  V           P+L +  +LD   P       ++ Y  + ADPS    P                     SYA NM AF G       + DG S TIA A++Y+ R  SP          LS     D          P+     G RR +FAD GW DV PVT      TRPSVAG TFQVRP P++ D    QTP  AGL VAMFDGSVRT++P V   VFW+ VT  GGEV
Sbjct:    3 TLVHVRRGVTLVEVLVVIAILALLMGLLLAAVQQVRESAALLQNKNNLRQIVLAVHQVAGENEGKIQDLMRSSMQGANGVSCDAALFYRLVPYVQGQPLNYHPNLSLGEILDLAQP-----NNVKVY-HNLADPSWDYDPAYA------------NARCKCSYALNMFAFDGSVSLVASLPDGASQTIALADKYFAR-CSPN-------VTLSKPTSND----FTQIFDPYNGEIYGRRRATFADRGWHDVLPVTDPATNTTRPSVAGKTFQVRPRPEEVDPSIPQTPHRAGLTVAMFDGSVRTISPSVAESVFWAQVTPAGGEV 297          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: UPI001B31ABF3 (DUF1559 domain-containing protein n=1 Tax=Gemmata palustris TaxID=2822762 RepID=UPI001B31ABF3)

HSP 1 Score: 157 bits (398), Expect = 1.190e-42
Identity = 109/317 (34.38%), Postives = 156/317 (49.21%), Query Frame = 1
Query:   10 NKRNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPPPPVGRGIQGLRPYLI---SPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADP-NPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGVTRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNADF 948
             +  G +LIE+LVV+AI+  LI  L+PAVQK R  A+RM+S N ++QV+ A H   +     + G+ +P P    +         + +P+L     L       +      P+++   SPADPS ++ P          T    +  G  SYA N        R P    DG+S+TIA+ ERY             G+ A  W   A P  P L S     P  +  +RR +FADP   D+ P+     T PS+AG+TFQ  P     D   LQTP ++G+++ M DGS RTV+P + P +FW AVT +GGEV  D+
Sbjct:    4 RQNCGFTLIEILVVIAIIGILIGLLIPAVQKVRAAAIRMQSLNKMKQVVLATHNYTSANAEALPGYGSPVPLVVSKSP-----FELLLPYLEAQNTLT------KSGSSPIPFVVAYRSPADPSLLTAP----------TEQTDEIYGNISYAANYQVLRAGTRLPAGCPDGSSNTIAYGERYA----------QCGSVASEW---ATPWFPCLDSQGNVIPCASPPLRRAAFADPLVADIKPIIGPNGTNPSIAGLTFQTAPPLDQCDYRALQTPHASGMIIGMLDGSARTVSPTILPSIFWGAVTPNGGEVLGDW 286          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A6M5YP41_9BACT (Uncharacterized protein n=1 Tax=Frigoriglobus tundricola TaxID=2774151 RepID=A0A6M5YP41_9BACT)

HSP 1 Score: 157 bits (398), Expect = 1.800e-42
Identity = 127/336 (37.80%), Postives = 162/336 (48.21%), Query Frame = 1
Query:   10 NKRNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPP---PPVGRGIQGLRPYLISPADPSDMSGPMTTV--SLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGW-------GDVTPVTVNG--VTRPSVAGVTFQVRP---------LPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNADF 948
            + R+G +L+E+LVVVAI+AALI FLLPAVQK RE A+RM+S NNLRQ+  AVH       G +      A         +T +  V  PH+   + LD        G     LR  L+SPADPS ++  +T V   + +   LL+  Q   TSY  N  AF   P       DG S TI FAERY     SP    +F  Y                             RP+FAD G        G V P+T     ++RPS +G TFQVRP          P D D    QTP  +G+LV M DG+VRT+AP V P++FW+ VT   GEV  D+
Sbjct:    6 SPRSGFTLLELLVVVAIIAALIGFLLPAVQKVREAAIRMQSQNNLRQIGLAVHTYAEASAGQLPLIDGNA--------SSTPWRFVPSPHMAAAKYLDGAISHESFGYPTSFLR-TLVSPADPS-LAARLTPVWIDVDEERVLLDRSQEAATSYCANAFAFVNRPSLDASFPDGLSQTIWFAERYAECRGSPMVYTSF-LYG----------------------------RPTFADGGPILNGDNNGHVYPITEGSPPISRPSRSGATFQVRPRVGDPDAPRAPDDCDYTLPQTPHLSGMLVGMGDGAVRTIAPAVRPDIFWALVTPARGEVGGDW 302          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A6P2D7F3_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2D7F3_9BACT)

HSP 1 Score: 154 bits (388), Expect = 3.590e-41
Identity = 115/313 (36.74%), Postives = 158/313 (50.48%), Query Frame = 1
Query:   13 KRN-GISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPPPPVGRGIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGVTRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNADF 948
            +RN G +LIE LVV+A++  LI  L+PAVQK R  AVRM+S N ++QV+ A H         + G+ +P P    +         + +P+L     L   P      Q +  Y  SPADPS +      V+ PD   + ++   G  S+A N        R P    DG+S+TIA+ ERY      P        +A+ W       P L S    FP +   +RR +FADP   DV PV     T PSV G TFQ  PL    D   LQTP ++G++  + DGSVRTV+P V+P V+W AVT +GGE+  D+
Sbjct:    4 RRNCGFTLIETLVVIAVIGILIGLLIPAVQKVRAAAVRMQSVNRMKQVVLATHNFVTVSDEVLPGYGSPMPLVPSKSP-----FELLLPYLETQNTLVRNP--NNPFQFVVAYQ-SPADPSLL------VTHPD--PVEDFY--GNISFAANYQVLRVGTRLPAGCPDGSSNTIAYGERYAQCGSVPSE------WAMPWF------PCLDSQGYVFPCSKPPLRRAAFADPLVADVKPVMGPNGTGPSVPGFTFQAAPLLNQCDYRVLQTPHASGMITGVLDGSVRTVSPSVSPSVYWGAVTPNGGEILGDW 286          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A8E6B2P7_9BACT (DUF1559 domain-containing protein n=1 Tax=Telmatocola sphagniphila TaxID=1123043 RepID=A0A8E6B2P7_9BACT)

HSP 1 Score: 144 bits (362), Expect = 2.400e-37
Identity = 113/329 (34.35%), Postives = 146/329 (44.38%), Query Frame = 1
Query:   16 RNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPPPPVGRGIQGLRPYLISPA-------DPSDMSGPMTTVSLPDGSTL---LEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEP----IDAFG-TYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGV---TRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNADF 948
              G SLIE +VV+AI+ ++I  LL A+Q  R  A RM+SANNLRQ+I A H   +D  G +  +    PK    + +                        G  +Q L+PY   P        D  +   P   +S  D S     +  +  G  SYAFN  AF           DGTS+TIAFA+RY     S        D  G  Y + W                        R PSFAD  WGDV PVT N V   T+PSV G+TFQ  P P + +   L +   +GL  A FDGSVRT+ P + P VFWS VT + G+   +F
Sbjct:    5 NRGFSLIETIVVIAIIGSMIGLLLSAIQMVRLQANRMESANNLRQIIIATHNFASDRQGVLPSYVPYHPKYKGIKKK------------------------GSLLQKLQPYFQCPMVTFHTKDDDLEFLTPKIFLSPTDSSLAAFPVSQESWGNISYAFNAYAFLLDKNLNSSFSDGTSNTIAFADRYARADISVRGGNLRYDVTGFQYDIFW------------------------RVPSFADELWGDVVPVTTNSVPITTQPSVPGLTFQPAPDPHNFNPSLLSSHVKSGLETAFFDGSVRTITPTIAPSVFWSLVTPNAGDATQNF 285          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A8E6ETJ7_9BACT (DUF1559 domain-containing protein n=1 Tax=Telmatocola sphagniphila TaxID=1123043 RepID=A0A8E6ETJ7_9BACT)

HSP 1 Score: 137 bits (345), Expect = 9.160e-35
Identity = 112/335 (33.43%), Postives = 156/335 (46.57%), Query Frame = 1
Query:    1 TAVNKRN-GISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETT------DYLRVTIPHLFVVRLLDPPPPVGRGIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYY----------VRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGV---TRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNAD 945
            T+++ R+   +LIEVLVV AIV  +I  LL A+Q  R  A R++S+NNLRQ+  A      D  G +  +    P+  Q++ +T        YL+  +       L         G   L+ YL SP DPS    P++  S             G  SYAFN  AF     +     DGTS+TIAFA+RY           +RY  P        +   W+                       R PSF+D  WGDV PVT N +   T PS +GVTFQ  P P++ +   L +  ++G+  A FDGSVRTVAP +TP +FWS +T   G++  +
Sbjct:    4 TSLHSRSFAFTLIEVLVVFAIVGLMIGLLLAAIQAVRTQARRLESSNNLRQIALATVTHATDHQGKVPSYIPFHPRYEQQQPKTLLFKTLESYLQCPMVTYHTGSLAASQKV---GDLTLKVYL-SPTDPSLSVFPVSDDSW------------GNISYAFNAVAFLMERNYDSGFPDGTSNTIAFADRYARAGSRVVGGSIRYDIP-------VFQYDWIW----------------------RTPSFSDELWGDVIPVTPNKLPILTHPSTSGVTFQPAPDPRNFNPHVLSSHLASGIQTAFFDGSVRTVAPSITPSIFWSLITPAAGDLTLE 293          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: UPI0011CCEA8F (DUF1559 domain-containing protein n=2 Tax=Gemmata obscuriglobus TaxID=114 RepID=UPI0011CCEA8F)

HSP 1 Score: 134 bits (338), Expect = 8.420e-34
Identity = 112/315 (35.56%), Postives = 147/315 (46.67%), Query Frame = 1
Query:   16 RNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPPPPVGRGIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYV--RYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVT--VNGVTRPSVAGVTFQVRPLP-KDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEVNAD 945
            R G +L+E+LVVVAI A LI  LLPAVQK R  A RMK +N LRQ   A        T +   F  PA      RD    + ++              P V +G +G   +L  P  P  +  P      P          GG  S++ N   F        ++ DG SST+A AERY    ++++   +  +  Y      Y D    L  +       + G RRP+FAD  + DVTPVT  V   T PSVA +TFQ RPL   D D+   Q  F AG+L A  DGSVR + P  +P V+W  VT  GGE+ +D
Sbjct:   10 RTGFTLLELLVVVAIAAILIGLLLPAVQKVRTAAARMKISNQLRQFSIATANYA---TAHNDKF--PAADGEGSRDNAAAFYQLL-------------PYVEQGAEG---WLHQPDGPPILRNPYD----PTWQGFPPNSMGGNVSFSLNALLFRSGLTC-NNLTDGASSTMAIAERYATCGKFYADWQMPKYSCYR-----YEDGKMILLQSC------SSGRRRPTFADAFFNDVTPVTDLVTNTTSPSVASLTFQTRPLSIADCDSRIPQATFDAGILTAFADGSVRLLRPATSPNVYWGMVTPQGGEIVSD 287          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A517XLI4_9BACT (Uncharacterized protein n=2 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XLI4_9BACT)

HSP 1 Score: 130 bits (327), Expect = 1.340e-33
Identity = 80/169 (47.34%), Postives = 91/169 (53.85%), Query Frame = 1
Query:  442 GPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYY-----VRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGVTRPSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGE 933
            G TSYA N+ AF    R PE   DGTS+TIAF E Y      +RY     +            Y D             LN    RR SFAD  +GDV PVT NGVT+PS AG TFQV P  +D D    QTP   G+LV +FDGSVRTV  G+ P  FW+AVTRDGGE
Sbjct:    5 GNTSYAANLVAFYAAYRLPEGYPDGTSATIAFGEHYARCGPGIRYNFSHSLIGSSVMGAPPDQYYDQ------------LNRH--RRGSFADAYYGDVVPVTANGVTQPSRAGATFQVAPQVEDCDPNLPQTPHPGGMLVLLFDGSVRTVRGGIDPSAFWAAVTRDGGE 159          
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Match: A0A2Z3H3H8_9BACT (Prepilin-type cleavage/methylation domain-containing protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3H3H8_9BACT)

HSP 1 Score: 132 bits (332), Expect = 9.360e-33
Identity = 122/335 (36.42%), Postives = 148/335 (44.18%), Query Frame = 1
Query:   16 RNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQVITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLLDPPPPVGRGIQGLR--PYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPTSYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYALSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGW-------GDVTPVTVN--GVTRPSVAGVTFQVRPL-----------------PKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEVFWSAVTRDGGEV 936
            R G +LIE++VV+AI+A LIA LLPAVQK R  A+R +SANN+RQ+  A+H    D         NP P   +       + R + P +F+  L        R  Q     P   SPADPS    P      PDG   L +     TSYA N   F G         DG S T+ FAE Y                A S   Y+  +P           +   +RR +FAD G        GDV PVT     VTRPS  GVTFQVRP                    D D    QTP   G+LV + DGSVRTV    + E FW+AVT  GGEV
Sbjct:    2 RRGFTLIEIVVVIAILAVLIALLLPAVQKVRAAAIRTRSANNIRQINLALHNYAGDRRVLPTIDGNPRPVYIESLGV---WGRQSDPLVFMALLPHIESSGYRQDQAYPSVPMYRSPADPSAALYP------PDGPAALFHH----TSYAANAQVFVGRTSLDRVAPDGLSQTMFFAEHYLA-------------CAKSSFTYSSADP-----------DRHLIRRATFADGGPVLAGVNPGDVYPVTSGTPAVTRPSRDGVTFQVRPRLWASEKPLSASPPPPPGAGDCDPSLPQTPHEGGMLVGLGDGSVRTVGRSASVETFWAAVTPAGGEV 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11334.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A831T7L6_9BACT1.710e-4538.44DUF1559 domain-containing protein n=1 Tax=Gemmatac... [more]
A0A354GU25_9BACT8.870e-4338.46Prepilin-type cleavage/methylation domain-containi... [more]
UPI001B31ABF31.190e-4234.38DUF1559 domain-containing protein n=1 Tax=Gemmata ... [more]
A0A6M5YP41_9BACT1.800e-4237.80Uncharacterized protein n=1 Tax=Frigoriglobus tund... [more]
A0A6P2D7F3_9BACT3.590e-4136.74Uncharacterized protein n=1 Tax=Gemmata massiliana... [more]
A0A8E6B2P7_9BACT2.400e-3734.35DUF1559 domain-containing protein n=1 Tax=Telmatoc... [more]
A0A8E6ETJ7_9BACT9.160e-3533.43DUF1559 domain-containing protein n=1 Tax=Telmatoc... [more]
UPI0011CCEA8F8.420e-3435.56DUF1559 domain-containing protein n=2 Tax=Gemmata ... [more]
A0A517XLI4_9BACT1.340e-3347.34Uncharacterized protein n=2 Tax=Urbifossiella limn... [more]
A0A2Z3H3H8_9BACT9.360e-3336.42Prepilin-type cleavage/methylation domain-containi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11334contigP-wetherbeei_contig11334:129..1079 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1210884.HG799465_gene11473
PFAMsN_methyl,SBP_bac_10
Model size951
Max annot lvl2|Bacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3e-154
EggNOG OGsCOG2165@1|root,COG2165@2|Bacteria
Descriptiongeneral secretion pathway protein
Cds size951
COG categoryNU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.3909984-CDS-P-wetherbeei_contig11334:128..10791683185907.3909984-CDS-P-wetherbeei_contig11334:128..1079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig11334 129..1079 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11334.2.1prot_P-wetherbeei_contig11334.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig11334 129..1079 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig11334.2.1

>prot_P-wetherbeei_contig11334.2.1 ID=prot_P-wetherbeei_contig11334.2.1|Name=mRNA_P-wetherbeei_contig11334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=317bp
TAVNKRNGISLIEVLVVVAIVAALIAFLLPAVQKARETAVRMKSANNLRQ
VITAVHQQGADETGYIGGFRNPAPKTSQERDETTDYLRVTIPHLFVVRLL
DPPPPVGRGIQGLRPYLISPADPSDMSGPMTTVSLPDGSTLLEYQQGGPT
SYAFNMAAFAGPPRFPEDIRDGTSSTIAFAERYYVRYFSPEPIDAFGTYA
LSWLGYADPNPALPSTIPPFPLNNRGVRRPSFADPGWGDVTPVTVNGVTR
PSVAGVTFQVRPLPKDADALQLQTPFSAGLLVAMFDGSVRTVAPGVTPEV
FWSAVTRDGGEVNADF*
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mRNA from alignment at P-wetherbeei_contig11334:129..1079-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig11334.2.1 ID=mRNA_P-wetherbeei_contig11334.2.1|Name=mRNA_P-wetherbeei_contig11334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=951bp|location=Sequence derived from alignment at P-wetherbeei_contig11334:129..1079- (Phaeothamnion wetherbeei SAG_119_79)
ACTGCCGTGAACAAGCGGAACGGAATCAGCCTCATCGAAGTGCTGGTCGT CGTGGCCATCGTCGCCGCGCTGATCGCGTTTCTGCTGCCGGCCGTCCAGA AAGCGCGAGAGACGGCCGTGCGCATGAAGTCGGCGAACAACCTCAGACAG GTCATTACGGCGGTCCACCAGCAGGGCGCCGACGAAACCGGCTACATCGG CGGGTTCCGCAACCCCGCCCCGAAGACCAGTCAGGAGCGCGACGAGACCA CGGACTACCTGCGGGTGACAATCCCGCACCTGTTCGTCGTCCGCCTACTC GACCCCCCGCCGCCCGTCGGGCGCGGGATCCAGGGGCTCCGGCCGTATCT GATCTCGCCCGCCGACCCCTCGGACATGTCCGGGCCGATGACCACGGTCT CCCTCCCCGACGGGAGCACGTTACTCGAGTACCAGCAGGGCGGGCCGACC AGCTACGCGTTCAACATGGCGGCGTTCGCCGGCCCGCCCCGGTTCCCGGA GGACATCCGGGACGGCACGTCGAGCACCATCGCCTTCGCCGAGCGGTACT ACGTGCGGTACTTCTCCCCCGAGCCGATCGACGCGTTCGGCACCTACGCC CTGTCGTGGCTGGGGTACGCGGACCCGAACCCGGCCCTGCCCTCCACGAT CCCGCCGTTCCCGCTGAACAACCGGGGCGTCCGGCGGCCGTCGTTCGCGG ACCCGGGCTGGGGGGACGTGACACCGGTCACCGTAAATGGGGTGACCCGG CCGTCGGTAGCCGGCGTGACGTTTCAGGTGCGCCCGCTGCCGAAAGACGC CGACGCGCTCCAACTGCAAACGCCGTTCAGCGCGGGCCTGCTCGTGGCGA TGTTCGACGGCAGCGTGCGGACGGTCGCGCCGGGGGTGACGCCCGAAGTG TTCTGGAGCGCCGTGACGCGCGACGGCGGAGAGGTGAACGCGGATTTCTG A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig11334:129..1079-

>mRNA_P-wetherbeei_contig11334.2.1 ID=mRNA_P-wetherbeei_contig11334.2.1|Name=mRNA_P-wetherbeei_contig11334.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=951bp|location=Sequence derived from alignment at P-wetherbeei_contig11334:129..1079- (Phaeothamnion wetherbeei SAG_119_79)
ACTGCCGTGAACAAGCGGAACGGAATCAGCCTCATCGAAGTGCTGGTCGT
CGTGGCCATCGTCGCCGCGCTGATCGCGTTTCTGCTGCCGGCCGTCCAGA
AAGCGCGAGAGACGGCCGTGCGCATGAAGTCGGCGAACAACCTCAGACAG
GTCATTACGGCGGTCCACCAGCAGGGCGCCGACGAAACCGGCTACATCGG
CGGGTTCCGCAACCCCGCCCCGAAGACCAGTCAGGAGCGCGACGAGACCA
CGGACTACCTGCGGGTGACAATCCCGCACCTGTTCGTCGTCCGCCTACTC
GACCCCCCGCCGCCCGTCGGGCGCGGGATCCAGGGGCTCCGGCCGTATCT
GATCTCGCCCGCCGACCCCTCGGACATGTCCGGGCCGATGACCACGGTCT
CCCTCCCCGACGGGAGCACGTTACTCGAGTACCAGCAGGGCGGGCCGACC
AGCTACGCGTTCAACATGGCGGCGTTCGCCGGCCCGCCCCGGTTCCCGGA
GGACATCCGGGACGGCACGTCGAGCACCATCGCCTTCGCCGAGCGGTACT
ACGTGCGGTACTTCTCCCCCGAGCCGATCGACGCGTTCGGCACCTACGCC
CTGTCGTGGCTGGGGTACGCGGACCCGAACCCGGCCCTGCCCTCCACGAT
CCCGCCGTTCCCGCTGAACAACCGGGGCGTCCGGCGGCCGTCGTTCGCGG
ACCCGGGCTGGGGGGACGTGACACCGGTCACCGTAAATGGGGTGACCCGG
CCGTCGGTAGCCGGCGTGACGTTTCAGGTGCGCCCGCTGCCGAAAGACGC
CGACGCGCTCCAACTGCAAACGCCGTTCAGCGCGGGCCTGCTCGTGGCGA
TGTTCGACGGCAGCGTGCGGACGGTCGCGCCGGGGGTGACGCCCGAAGTG
TTCTGGAGCGCCGTGACGCGCGACGGCGGAGAGGTGAACGCGGATTTCTG
A
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