mRNA_P-wetherbeei_contig11332.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: D7G2Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z2_ECTSI) HSP 1 Score: 187 bits (474), Expect = 5.390e-55 Identity = 98/175 (56.00%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 1 KSDGGGESSGINPVTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQP 525 ++D G SSG VTLVSM+GD F VEAS +S L+K M++G + ++EIPL NM SNV+AKV+EFC H +PM +IPKPV +GK V D+VQ WY+ F+++L MLFE++LAANYLD+ PLL++ +TVGL MNKTPEEI+ I KE S EVER LR++NKWST+P Sbjct: 28 RTDTGASSSGA--VTLVSMDGDGFVVEASAIEVSKLLKAMVDGPT-ENAAKEIPLTNMRSNVVAKVVEFCQHHQTDPMTDIPKPVQFGKTVGDHVQEWYSTFVKALKDEMLFEMLLAANYLDLSPLLELCAATVGLRAMNKTPEEIQREFNI-KEPFSPEVERTLRQENKWSTEP 198
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A836CJ49_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ49_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.010e-54 Identity = 96/180 (53.33%), Postives = 130/180 (72.22%), Query Frame = 1 Query: 4 SDGGGESSGINPVTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGE--SQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQPAATS 537 SD + G VTLV+M GD+F V+ +V SLS +I+VM+E DGE + EIPLP + VLAKV+++C H+ EPM EIP+P+ YG+ V D+VQPWYA F+++LD LFELIL+ NYLDVKPLL +T + GL++MNKTP+EI+ LGIE + + EVERQLR++ +WST+P S Sbjct: 3 SDDAKRADGAGTVTLVAMGGDTFTVDRNVISLSQVIRVMLED---DGECVATEIPLPTVRGPVLAKVVDYCVHYQTEPMTEIPRPIKYGRTVADHVQPWYAEFVDALDKETLFELILSCNYLDVKPLLDLTSAVAGLMLMNKTPDEIRATLGIE-QPFAPEVERQLRDEIRWSTEPPVRS 178
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A7S3XK24_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK24_HETAK) HSP 1 Score: 167 bits (422), Expect = 5.440e-47 Identity = 86/167 (51.50%), Postives = 118/167 (70.66%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGES-QEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESL----DTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQP 525 V L++ +GDSF V +S LI+ M + + + + QEIPLPN+ S VL KVIEFC H+ E M IP+P+ YG +V D VQ WY +F++ L + MLF+LILAANYLD+KPLL +TC+TVGLL+MNKTP++I+E GI++E S E+ QL ++NKWST+P Sbjct: 38 VNLITQDGDSFTVAREKVQISELIRTMFDDSLDESDDPQEIPLPNLKSPVLVKVIEFCKHYHKEKMARIPEPIKYGLQVADVVQDWYGQFVDDLVSKKEFEMLFDLILAANYLDIKPLLDLTCATVGLLMMNKTPDQIREAFGIDEE-FSPELYDQLLKENKWSTEP 203
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A7S3UW02_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW02_HETAK) HSP 1 Score: 165 bits (418), Expect = 2.290e-46 Identity = 84/168 (50.00%), Postives = 118/168 (70.24%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMI-EGTAVDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESL----DTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQPA 528 V L++ +GDSF V + +S LIK MI E D + QEIPLPN+ SNVL KVIEFC ++ + M IP+P+ YG +V D VQ WY ++++L + MLF+L+LAANYLD+K LL + +T+GLLIMNKTP++I+E LG+++E S E+ QL ++ KWST+PA Sbjct: 40 VNLITQDGDSFTVSRDIVMISELIKTMIDESLGEDDDPQEIPLPNLKSNVLVKVIEFCKYYHKDKMATIPRPIKYGLQVADVVQDWYGEYVDALVNNKEFEMLFDLVLAANYLDIKSLLDLASATIGLLIMNKTPDQIRETLGLDEE-FSPEMHEQLMQEMKWSTEPA 206
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A6V3BV71_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BV71_HETAK) HSP 1 Score: 161 bits (407), Expect = 4.620e-45 Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGESQE-IPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESL----DTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQPAATS 537 +TLV+ +G+SF++ +VA +S L+K M+E ++QE I LPN+ VLAKVIEFCN EPM EIPKP+ +GK+V+D VQP + +++ + D +L +L+LAA YLDV+PL +TC+ +GLLIMNKTP+EI+E+ G+E S E+E+ LRE+NKWS +P T+ Sbjct: 20 ITLVTSDGESFRISKAVARVSELVKNMMEDADETMQTQEEIRLPNLKGKVLAKVIEFCNLQVEEPMAEIPKPIKFGKQVRDVVQPAFGAYVDGMVAARDWLLLLQLVLAAQYLDVRPLADLTCAALGLLIMNKTPDEIRELFGVESP-FSPEIEQLLRENNKWSVEPPPTA 189
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: D7G1U6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U6_ECTSI) HSP 1 Score: 159 bits (403), Expect = 1.310e-44 Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 1 Query: 19 ESSGINPVTLVSMEGDSFQVEASVASLSNLIKVMIEGTAV-DGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKW 513 E+ V LVS EG+SF ++ SVA +SNL+K MI+ A DG++QEIPLPN+ ++VL+KVIEFC H+ +PMNEI KP+ + D VQ WYA+F+E T LFELILAANY+D+KPLL +TC+TV +I KT EEI++ I + + E E Q+RE+NKW Sbjct: 17 ETEDTRSVHLVSQEGESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLK-SANMHDVVQEWYAKFVEVQQET-LFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVND-FTPEEEAQVREENKW 179
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A7S2V4T9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T9_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.000e-43 Identity = 77/166 (46.39%), Postives = 112/166 (67.47%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKWSTQPAATS 537 V L+S + + +V V S+S + ++E E EIP+ N + VL KV+ FC+ + +PM IP PVP+G +K+Y+Q WYA F+E + T+ LF+L AAN+LD+ PLL++TCS +GLL+MNKTP EI+E+LG+E+E S E+E +L N+WSTQPA S Sbjct: 5 VALLSQDNEKVKVPRDVISISKFVSSVLEDLNGSEEEIEIPILNTKAAVLQKVVRFCSQYCQDPMKSIPAPVPFGHPLKEYIQEWYADFLEEIATSDLFDLAAAANFLDIPPLLELTCSAIGLLVMNKTPAEIREMLGVEEE-FSPELEEELLMKNRWSTQPACQS 169
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A4D9D5I6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5I6_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.140e-43 Identity = 82/158 (51.90%), Postives = 109/158 (68.99%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKW 513 V LVS EGD ++VE SV +S L+K M+ E+QEIPLPN+ +NVLAKVIEFC H +PMN+I KP+ + + VQ WYA F+ ++D +LFELILAANY+D+KPLL +TC+TV +I KTPEEI+ I + + E E Q+RE+NKW Sbjct: 14 VHLVSQEGDQYEVEVSVCKMSELVKTMLPDDDDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLK-SANMHEVVQDWYANFV-NVDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITND-FTPEEEAQVREENKW 168
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A835Z9K0_9STRA (Skp1 family, dimerization domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K0_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.640e-43 Identity = 83/159 (52.20%), Postives = 113/159 (71.07%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTA-VDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKW 513 V LVS EGDSF V VA +S L+K MI+ A D E+QEIPLPN+ S+VL K+IEFC H+ +PMNEI KP+ +++ VQ W+A F++ ++ +LFELILAANY+D+KPLL +TC+TV +I KTPEEI++ I + + E E Q+RE+NKW Sbjct: 28 VNLVSQEGDSFDVSIKVAKMSELVKTMIDDDADEDAEAQEIPLPNVKSSVLTKIIEFCRHYIEDPMNEIEKPLK-SANMQEVVQDWFANFVQ-VEQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVND-FTPEEEAQVREENKW 183
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Match: A0A7S2SQM9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQM9_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.990e-43 Identity = 83/158 (52.53%), Postives = 110/158 (69.62%), Query Frame = 1 Query: 40 VTLVSMEGDSFQVEASVASLSNLIKVMIEGTAVDGESQEIPLPNMHSNVLAKVIEFCNHFPVEPMNEIPKPVPYGKKVKDYVQPWYARFMESLDTTMLFELILAANYLDVKPLLQITCSTVGLLIMNKTPEEIKEVLGIEKEGLSSEVERQLREDNKW 513 V LVS EGD+FQVEA VA +S L+K M+ E QEIPLPN+ S+VL KVIEFC H+ +PM EI KP+ + + VQ WYA F++ ++ +LFELILAANY+D+KPLL +TC+TV +I KTPEEI++ I + + E E Q+RE+NKW Sbjct: 24 VQLVSQEGDNFQVEAKVAKMSELVKTMLPDEDEGDEVQEIPLPNVKSSVLGKVIEFCRHYKEDPMTEIEKPLK-SSTMSEVVQEWYATFVD-VEQEVLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVND-FTPEEEAQVREENKW 178 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11332.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11332.1.3 >prot_P-wetherbeei_contig11332.1.3 ID=prot_P-wetherbeei_contig11332.1.3|Name=mRNA_P-wetherbeei_contig11332.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=162bp MEGDSFQVEASVASLSNLIKVMIEGTAVDGESQEIPLPNMHSNVLAKVIEback to top mRNA from alignment at P-wetherbeei_contig11332:103..1695- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11332.1.3 ID=mRNA_P-wetherbeei_contig11332.1.3|Name=mRNA_P-wetherbeei_contig11332.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1593bp|location=Sequence derived from alignment at P-wetherbeei_contig11332:103..1695- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11332:103..1695- >mRNA_P-wetherbeei_contig11332.1.3 ID=mRNA_P-wetherbeei_contig11332.1.3|Name=mRNA_P-wetherbeei_contig11332.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=486bp|location=Sequence derived from alignment at P-wetherbeei_contig11332:103..1695- (Phaeothamnion wetherbeei SAG_119_79)back to top |