mRNA_P-wetherbeei_contig11331.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: D7FYG1_ECTSI (GBP3, guanylate-binding proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG1_ECTSI) HSP 1 Score: 131 bits (329), Expect = 1.810e-31 Identity = 80/218 (36.70%), Postives = 120/218 (55.05%), Query Frame = 1 Query: 49 RPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVD--DSERSNAFGCLVILCRDVDPSEEENCGRKVMGIEDETAAEEDDGFGESEEA-QAATKRRNNIRRQLQDAFATVIVKCLPDP 693 +PLN+V + G AR GKS L+N G F S + +PCT G D+SS + L DF G+ + A+ + P I FVD EG GD+ ++++L TP ++VS+VV+YNW LPN+ ML L V+ AA V +++ FG L+IL RDV +E E+ + + E G G ++ A + A RN IR L++ FA++ + +P P Sbjct: 41 QPLNIVTIVGNARKGKSFLMNQLTGHDGMFRASANTEPCTAGADLSSIVMSLTDFRRGSGSSSKASGPSPSE--PAIVFVDMEGQGDKSTDHDVRLATPFLLVSKVVIYNWMSLPNKHRMLEELEVMVQAADKVSTQNNKGERDFGHLIILMRDVGRAESES--DRAEEVRRLVLDSEQAGAGRTKLADRRAMDERNTIRDGLREGFASITIHAMPRP 254
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: F0XZ34_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ34_AURAN) HSP 1 Score: 125 bits (314), Expect = 2.800e-29 Identity = 85/233 (36.48%), Postives = 117/233 (50.21%), Query Frame = 1 Query: 49 RPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQH----DQTGP------------LIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSERSNAFGCLVILCRDVDPSEEENCGRK--VMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 +PL+LV VFG AR GKS L+N G F VS + +PCTQG+DVS++ L+ F GG PA G GP L+GF DAEG GDR Y+ +LV P ++ SR V++NWK + +L+ L V+ AA V DS FG L ++ RD +++ K + G+E G+ A +R+ IRR L+ AFA+V V P P Sbjct: 29 QPLHLVSVFGAARQGKSFLMNALSGMDGVFKVSNALEPCTQGIDVSTSTLSLEKFRAVGGGGAPAAGGGLLSWLPGWGPAAPPEAASGGDDLVGFCDAEGQGDRDVRYDARLVCPALLASRCVIFNWKDSLQKDRILNQLGVMVRAAEGVADSGSGPVFGHLHVVFRDWTFEDDDAAKVKASIFGLE---------AGGKRGAASPDAVQRDEIRRALEKAFASVDVHLFPPP 252
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A5D6XRZ9_9STRA (GBP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ9_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.150e-29 Identity = 89/222 (40.09%), Postives = 121/222 (54.50%), Query Frame = 1 Query: 55 LNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDF--LHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVD--DSERSNAFGCLVILCRD---VDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDPFA 699 +NLV VFG AR GKS L+NL F +S +PCTQGVD+++ L +F LH G + PA GQ L+GFVDAEG GDR +Y+ +LV+PV++ S+ V++NWK ML+ LAVLA AA ++ D + + FG L I+ RD VD + E+ +D A E+ G EEA RN R L DAF ++ + P P A Sbjct: 60 VNLVSVFGAARQGKSFLMNLLAGQQDLFRISNLREPCTQGVDLAARFLPLAEFSALHGGASVRPAGGGQM-----LVGFVDAEGQGDRDITYDSRLVSPVLLASKTVIFNWKDSLQADRMLNLLAVLARAAQGIELADGDNAKVFGHLHIIFRDWSFVDSTPEQV-------FKDLFAKEK----GRGEEAAV----RNLARANLVDAFESITIWLFPAPVA 261
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: D7FYG2_ECTSI (GBP4, guanylate-binding proteins n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYG2_ECTSI) HSP 1 Score: 122 bits (305), Expect = 2.880e-28 Identity = 80/230 (34.78%), Postives = 126/230 (54.78%), Query Frame = 1 Query: 46 ARPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLH--------AGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSE------RSNAFGCLVILCRDVDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 A P+NLV + GPAR GKS+L+N + TF +S S CT+G D+S ++ L DF + A TP N G + + F D EG GD E ++++L TP +++S+V+++NW G PN+ TML L V+ +A + + FG L+IL RD+ E+ R+++ + DE A G S++ + AT R N IR L+++F +++V+ LP P Sbjct: 35 AAPVNLVSILGPARNGKSSLMNTLVGTGDTFAMSDSVKACTKGGDLSRSVVRLADFENTDRYQSDWATFRSTP-NRGPDEDI--YVAFADVEGQGDECEEHDVRLATPFLLLSKVIIFNWLGRPNKTTMLEKLEVMVLATDKIKQQDGDGGCFHEKVFGHLIILARDLSGPEKAEEIRELL-LNDEDA-------GPSKDRKGATNR-NTIRAGLRNSFESIVVRTLPVP 252
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A067BQ42_SAPPC (GBP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQ42_SAPPC) HSP 1 Score: 120 bits (301), Expect = 1.510e-27 Identity = 86/234 (36.75%), Postives = 124/234 (52.99%), Query Frame = 1 Query: 7 AMLSAQLARDGQEARPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVD--DSERSNAFGCLVILCRD---VDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 A + Q+ + EA+P+NL+ +FG AR GKS L+NL + F +S +PCTQGVD+SS L +F G + +S + +GFVDAEG GDR +Y+ +LV+PV++ S+VV++NWK ML+ LAVLA AA V+ D + FG L I+ RD V+ + E+ + D +E G E RN R +L DAF ++ V P P Sbjct: 22 APAAEQVLKPLPEAQPINLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFMPLAEFSRQNGNTSIPSSMK-------VGFVDAEGQGDRDITYDSRLVSPVLLTSKVVIFNWKDSLQADRMLNLLAVLAKAAQNVELADGDNRKVFGHLHIVFRDWNFVNTTPEQ--------VYDTLFKKEKGGDKE-------VGNRNLARHELVDAFESIQVWLFPSP 233
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A6H5JVK0_9PHAE (GBP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK0_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.910e-27 Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 1 Query: 136 FTVSGSADPCTQGVDVSSTIFGLQDF--------------------LHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSERSNAFGCLVILCRDVDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 F V G + PCT G +S+T L+ + Q P IGFVD EG GD+ +SY+ KLV P++++S+VV+YNW+GLPNRAT L L+ + AA+ + ER ++FG L+IL RDV +E++ ++ EDET + +A A K RN R+ LQ +F ++ V CLP P Sbjct: 49 FAVEGGSWPCTVGASMSTTTRSLEQISXXXXXXXXXXXXXXXXXXXXXRSSTEQALTGASQPQQLPDIGFVDVEGQGDKGDSYDTKLVAPLLLLSKVVIYNWQGLPNRATTLDKLSAMTYAASLLSPEEREDSFGHLIILLRDVTSMQEQSAYDRIFEQEDETVR--------NTKAGDALKERNEKRKLLQQSFQSIRVCCLPRP 246
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A2D4CCJ3_PYTIN (GBP domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CCJ3_PYTIN) HSP 1 Score: 119 bits (298), Expect = 3.800e-27 Identity = 84/221 (38.01%), Postives = 116/221 (52.49%), Query Frame = 1 Query: 52 PLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVD--DSERSNAFGCLVILCRD---VDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDPFA 699 P+NL+ +FG AR GKS L+NL D F +S +PCTQGVD+S L F G +N+ IGFVDAEG GDR +Y+ +LV+PV++ S+VV++NWK +L+ LAVLA AA ++ D +++ FG L I+ RD VD S ++ R + E G S+E RN R L DAF ++ V P P A Sbjct: 61 PINLISIFGAARQGKSFLMNLLADQQDLFKISNLREPCTQGVDLSGHFIPLPTFSGLNGCPAISNNAVQ------IGFVDAEGQGDRDITYDSRLVSPVLLASKVVLFNWKDSLQADRILNLLAVLARAAQGIELADGDKTKVFGHLHIVFRDWSFVDSSPDD-VYRDLFAKEK----------GRSDEVNV----RNLARSNLVDAFESITVWLFPPPVA 260
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A7S3URQ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URQ4_HETAK) HSP 1 Score: 110 bits (276), Expect = 8.370e-27 Identity = 59/141 (41.84%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 55 LNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQHDQT-GPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSERSNA 474 LNL+ +FG AR GKS L+NL F +S + DPCTQG+D+S L+DF D+PA+ D + G +GFVDAEG GDR Y+ +LV+P ++ SR V++NWK R +L+ L V++ AA V+ ++ A Sbjct: 29 LNLISIFGAARQGKSFLMNLLSGQENIFQISNNQDPCTQGIDISGNFVSLKDFASV---DSPADGAAIDTSKGMQVGFVDAEGQGDRDAEYDARLVSPALLASRCVLFNWKDSLQRDRILNLLGVMSRAAMNVEKGRKAAA 166
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: D8LML7_ECTSI (GBP2, guanylate-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML7_ECTSI) HSP 1 Score: 117 bits (294), Expect = 9.920e-27 Identity = 82/220 (37.27%), Postives = 120/220 (54.55%), Query Frame = 1 Query: 55 LNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADT---PANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSERSNA----FGCLVILCRDVDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 L++V + G AR GKS L+N S F VS PCT+GVD+ + L +F + P++S Q P IGFVD EG GDR + +++L TP ++VS+VV++NW GLPN++T+L L V+ AA V S R N FG L+++ RDV +K IE +ED G E+A+ T+R N IR++L+ F + +V + P Sbjct: 34 LSVVTILGAARQGKSFLMNALTRSDNVFRVSPEVYPCTEGVDLFPILMPLSEFKRGSARNITHLPSSSPQ-----PTIGFVDMEGQGDRSDERDVRLATPFLLVSKVVIFNWLGLPNKSTILERLVVMIKAAEKV--SRRKNKGEPMFGHLILVMRDVK--------QKAAEIEALIMDDEDGGLTH-EDAEGVTER-NLIRKRLRAVFKSTVVHTMHRP 236
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Match: A0A1W0A876_9STRA (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A876_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.300e-26 Identity = 84/236 (35.59%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 1 VDAMLSAQLARDGQEARPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADPCTQGVDVSSTIFGLQDFLHAGGADTPANSGQHDQTGPLIGFVDAEGSGDRHESYELKLVTPVIIVSRVVVYNWKGLPNRATMLSSLAVLAMAAAAVDDSERSN--AFGCLVILCRD---VDPSEEENCGRKVMGIEDETAAEEDDGFGESEEAQAATKRRNNIRRQLQDAFATVIVKCLPDP 693 VD S ++ + +P+NL+ +FG AR GKS L+NL + F +S +PCTQGVD+SS L +F G Q+ ++GFVDAEG GDR +Y+ +LV+PV++ S+VV++NWK ML+ LAVLA AA V+ +E N FG L I+ RD ++ + E KV D F + + + RN R +L DAF ++ + P P Sbjct: 15 VDPAASKRVLKSLPPDQPINLISIFGAARQGKSFLMNLLANQQDLFRISNEKEPCTQGVDLSSHFVPLTEFSRQNGCPPV-------QSKMMVGFVDAEGQGDRDITYDSRLVSPVLLSSKVVIFNWKDSLQVDRMLNLLAVLAKAAQNVELAEGENRKVFGHLHIVFRDWNFINTTPE-----KVF----------DSLFKKEKGVSSEVSTRNLARHELIDAFESIQIWLFPVP 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11331.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig11331.1.1 >prot_P-wetherbeei_contig11331.1.1 ID=prot_P-wetherbeei_contig11331.1.1|Name=mRNA_P-wetherbeei_contig11331.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp MLSAQLARDGQEARPLNLVCVFGPARAGKSTLLNLFQDSTGTFTVSGSADback to top mRNA from alignment at P-wetherbeei_contig11331:26..724- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig11331.1.1 ID=mRNA_P-wetherbeei_contig11331.1.1|Name=mRNA_P-wetherbeei_contig11331.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=699bp|location=Sequence derived from alignment at P-wetherbeei_contig11331:26..724- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig11331:26..724- >mRNA_P-wetherbeei_contig11331.1.1 ID=mRNA_P-wetherbeei_contig11331.1.1|Name=mRNA_P-wetherbeei_contig11331.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig11331:26..724- (Phaeothamnion wetherbeei SAG_119_79)back to top |