mRNA_P-wetherbeei_contig1133.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A523YD71_9ARCH (RING-type domain-containing protein n=1 Tax=Methanomassiliicoccales archaeon TaxID=1906667 RepID=A0A523YD71_9ARCH) HSP 1 Score: 77.8 bits (190), Expect = 1.820e-12 Identity = 62/192 (32.29%), Postives = 87/192 (45.31%), Query Frame = 1 Query: 1 LGGNAPSPGRCGHAAVSQGQQNMLIM-GGRAGNLVLEDQHSLNVERERWHTVALSTAATPFPRVYFRACALQGIEWATFLFGGTDGSAVLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAA-ADSRLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGG 570 + G P R GH V N+ +M GGR G+ + D + W V + +P PR Y A LFGG DG+ VLAD + + +S + W + P G AP R H MA ADS I G D L+D WT++ + W ++ S+ P PR SH +A+ G ++FGG Sbjct: 74 MSGTFSPPPREGHRMVYDNTSNVFVMFGGRNGSQIFGDTWLYFDANDTW--VQVYPPGSPTPR-YGHAMVYDFFNDVVILFGGHDGTDVLADTYTYSVSGN---VWMNMNP-GNAPPKRQKHDMAYDADSHNVILFGGNDEINPLNDTWTYEVSLNDWIEMSPSN---SPSPRYSHSMAYDVAEGSTVLFGG 255
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: L8GKZ8_ACACA (Rab9 effector protein, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GKZ8_ACACA) HSP 1 Score: 70.1 bits (170), Expect = 6.360e-10 Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 7 GNAPSPGRCGHAAVSQGQQNMLIMGGRAGNLVLEDQHSLNVERERWHTVALSTAATPFPRVYFRACALQGIEWATFLFGGTDGSA-VLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNE--TLLDDLWTFDPTATTWQQIE 480 G+AP+P R GH G + + G + + D W + + P R A A+ G + ++FGG D +L D+ ++L T W ++ RG AP GRM+HA++A +RLF+HGG N+ T DL FD TW++++ Sbjct: 88 GSAPAP-RWGHTLSPVGNRLYMFGGALSPTICTNDLFLFETGTTLWRELRVK-GDCPARRTG-HAAAVVGTK--VYIFGGKDQQGRLLNDL--YILHTSGPARWEQVTGRGVAPAGRMDHALSAVGTRLFVHGGVVINDPATRASDLHVFDIVTQTWREVD 241
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A535Q4J3_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535Q4J3_9CHLR) HSP 1 Score: 69.3 bits (168), Expect = 9.580e-10 Identity = 47/140 (33.57%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 166 AATPFPRVYFRACALQGIEWATFLFGGTDGSA--VLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADS---RLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGG 570 A +P R Y+ A A LFGG + + AD W + TD W ++RP+ + P +++ A DS R+ + GG ET DDLW +D TW +++ + GPRP R H +A+ E G+L++FGG Sbjct: 339 ALSPSARSYY-AMAYDAKADRLVLFGGENANHGDYFADTWAYSFGTDR---WTQMRPKESPP--PRYYSVMAYDSVRDRMLLFGGANLAETPFDDLWAYDLGRDTWSELKPT--GPRPTARAWHAMAFDNEAGVLVLFGG 470
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: C3XRQ0_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3XRQ0_BRAFL) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-9 Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 1 Query: 232 FLFGGTDGSAVLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGG 570 ++FGG + VL D+ R+ W + P GR +H + + L + GG+ N +L+ DLW++D T+ TWQ++ +DP RPP H + ++ L VFGG Sbjct: 194 WIFGGYTLNDVLDDLMRYNFEDSR---WENMTTTTPRPAGRHSHTLTTVNDSLVLFGGELANSSLIGDLWSYDTTSNTWQELAVNDPN-RPPAVAGHATSLVDN-RYLYVFGG 301
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A6P4ZN34_BRABE (LOW QUALITY PROTEIN: multiple epidermal growth factor-like domains protein 8 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZN34_BRABE) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-9 Identity = 44/149 (29.53%), Postives = 66/149 (44.30%), Query Frame = 1 Query: 124 NVERERWHTVALSTAATPFPRVYFRACALQGIEWATFLFGGTDGSAVLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGG 570 N R W+ LS + T A A + ++FGG + VL D+ R+ W + P GR +H + + L + GG+ N L DLW++D T TWQ++ +DP RPP H + ++ L VFGG Sbjct: 223 NAGRSTWYQ--LSHSGTGLTARASHAGAYHAGSDSLWIFGGYTLNNVLDDLMRYNFEESR---WENMTTTTPRPAGRHSHTLTTVNDSLVLFGGELGNSRLAGDLWSYDTTTDTWQELAVNDPN-RPPAVAGHATSLVDN-RYLYVFGG 364
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A8H4VV27_9AGAR (Uncharacterized protein n=1 Tax=Agrocybe pediades TaxID=84607 RepID=A0A8H4VV27_9AGAR) HSP 1 Score: 63.9 bits (154), Expect = 5.070e-8 Identity = 46/173 (26.59%), Postives = 71/173 (41.04%), Query Frame = 1 Query: 304 TGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNETLLDDLWTFD----PTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGGLMAAETAYSAVDSGXXXXXXADSWAPTNDLWTLSMDAESGSSDSAWRHIVFDSIGPSPRSLSAVAVRPGSGIMFLFGGHG 810 T W L+ P GR H + S+L++ GG N+ +D+W FD T TW RPPPR +H E+ ++ V ++ + + S D ND W+ +++ W ++ P+PR A AV GIM++FGG G Sbjct: 148 TREWTLLKVSSPTPRGRYGHTLTLIGSKLYVFGGQV-NQEFFNDIWLFDLNSLKTMPTWDNSHEPATSVRPPPRTTHSSVAFEDQIIMQVPPQIIHKYSHLFLISS----FGGTDGKYHYNDTWSFNVNTR------VWTELICAGYIPAPRESHAAAVV--DGIMYVFGGRG 307
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A838RC22_9CHLR (Uncharacterized protein n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RC22_9CHLR) HSP 1 Score: 63.9 bits (154), Expect = 7.170e-8 Identity = 60/193 (31.09%), Postives = 78/193 (40.41%), Query Frame = 1 Query: 235 LFGGTDGSAVLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADS---RLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGGLMAAETAYSAVDSGXXXXXXADSWAPTNDLWTLSMDAESGSSDSAWRHIVFDSIGPSPRSLSAVAVRPGSGIMFLFGG 804 LFGG GS D W F L T + W+ L A +A DS RL I G A + ++ DD+W+FD T TWQQIEAS G P PR + L + G A+T Y ND W ++ S W ++ + P R L A+ G G + LFGG Sbjct: 441 LFGGRSGSTAFNDTWAFDLKTQS---WQLLGSSEAPRPPARFSMVAGVDSMRERLIITTGQAADGSVFDDVWSFDLTNDTWQQIEAS--GEAPAPRYGAAGGIFDYSDALYLTHGF--ADTRY-------------------NDTWAFDLERNS------WSNVTPEGDLPLNRCLHGAAMT-GPGSLALFGG 600
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A2P6V2H3_9CHLO (Nitrile-specifier 5-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V2H3_9CHLO) HSP 1 Score: 63.2 bits (152), Expect = 8.520e-8 Identity = 46/127 (36.22%), Postives = 62/127 (48.82%), Query Frame = 1 Query: 205 ALQGIEWATFLFGGTDGSAVL--ADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDAD---NETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHCLAWLEEPGLLIVFGG 570 +L I +L+GG V D++ + L+ TWR++ +G P R HA AA S L+I GG + E L+DLW FD TA TWQQ+ + P P R H L G L +FGG Sbjct: 20 SLTAIGDTLYLWGGEHAPRVPLGGDLYAYSLAQQ---TWRKVAVQGEPPSLRNAHAAAALGSDLYIFGGRSGIDIGEGSLNDLWRFDTTAATWQQVHPAAGSPLPLRRSYHRLE--AAGGKLYMFGG 141
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A455BN80_PHYMC (rab9 effector protein with kelch motifs isoform X2 n=10 Tax=Laurasiatheria TaxID=314145 RepID=A0A455BN80_PHYMC) HSP 1 Score: 62.0 bits (149), Expect = 1.800e-7 Identity = 40/124 (32.26%), Postives = 61/124 (49.19%), Query Frame = 1 Query: 67 MLIMGGRAGNLVLEDQHSLNVERERWHTVALSTAATPFPRVYFRACALQGIEWATFLFGGTDGSAVLADIWRFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNETLLDDL 438 + I+GG N D H++++E W T+ T+ P PR + + A G + ++FGG + A + + NT TW + G P R H M AA ++LFIHGG A+ + DDL Sbjct: 50 VFIVGGADPNRSFSDVHTIDLETRTW-TMPKVTSPPPSPRTFHTSSATIGNQ--LYVFGGGERGAQPVQDVKLHVFDANTLTWSQPETLGKPPSPRHGHVMVAAGTKLFIHGGLAE-DNFYDDL 169
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Match: A0A6P8YDI9_THRPL (rab9 effector protein with kelch motifs-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8YDI9_THRPL) HSP 1 Score: 60.5 bits (145), Expect = 7.860e-7 Identity = 56/189 (29.63%), Postives = 84/189 (44.44%), Query Frame = 1 Query: 7 GNAPSPGRCGHAAVSQGQQNMLIMGG--RAGNLVLEDQ-HSLNVERERWHTVALSTAATPFPRVYFRACALQGIEWATFLFGGTDGSAVLADIW-----RFMLSTDNTGTWRRLRPRGAAPCGRMNHAMAAADSRLFIHGGDADNETLLDDLWTFDPTATTWQQIEASDPGPRPPPRCSHC--LAWLEE 543 G+ P+P R H + + +++ GG +A + V + + L+ W TV + P PR + L G+ F GG G+ +D+ ++ L TG G+AP R H A + L+I GG + TL DD+W FD T+ TWQ+I PRP PR L WL + Sbjct: 180 GSVPAP-RTMHTTTADVEGELVLFGGGNQAASPVADPSVYKLDPVTCVWTTVD-TKGDPPAPR---QGHILVGVGAKLFCHGGMAGNKFFSDMHVLEDGKWTLVDAGTG-------EGSAPSARAGHGAVARGNLLYIFGGLGPHGTL-DDMWKFDCTSRTWQEIVFESDCPRPKPRLDFAMTLVWLPQ 355 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1133.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1133.4.1 >prot_P-wetherbeei_contig1133.4.1 ID=prot_P-wetherbeei_contig1133.4.1|Name=mRNA_P-wetherbeei_contig1133.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp LGGNAPSPGRCGHAAVSQGQQNMLIMGGRAGNLVLEDQHSLNVERERWHTback to top mRNA from alignment at P-wetherbeei_contig1133:6994..7803+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1133.4.1 ID=mRNA_P-wetherbeei_contig1133.4.1|Name=mRNA_P-wetherbeei_contig1133.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:6994..7803+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1133:6994..7803+ >mRNA_P-wetherbeei_contig1133.4.1 ID=mRNA_P-wetherbeei_contig1133.4.1|Name=mRNA_P-wetherbeei_contig1133.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:6994..7803+ (Phaeothamnion wetherbeei SAG_119_79)back to top |