mRNA_P-wetherbeei_contig1133.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A836CM39_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM39_9STRA) HSP 1 Score: 350 bits (898), Expect = 1.600e-116 Identity = 219/362 (60.50%), Postives = 249/362 (68.78%), Query Frame = 1 Query: 1 MFGMGGFGDIAGAAGYPGANGGQG-----FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEP-SKPAFEPFAGGGVRLDGKPVTAKAAAADRAXXXXXXXXXXXXXXXXXXXRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVRRPSAGKYARRASQTSAFQGSGNSLT 1068 MFG G G++ GY GA G + F EQYHCYPVSF+DKEHLEDGDKILLPSSALD+LARL +EYPMLF I+N AE K THCGVLEFSAPEGSCYIP+WMM NLLLE G L+T+KN SLPKA FVK QPQSVDFLDISNPRAVLERQLR +SCVT+GD +CIPYNA+KYYLE++EV+PA+AACIIETDCNVDFDAPVGY+E S S + +P P + KA EG+ + PAF PFAG G RLDGK +AAD A XXXXXXXXXXXXXXXXXX XXXX A R +AG++A+R QT AFQG GN L+ Sbjct: 1 MFGFG--GEMGYGGGYNGAGGARAAFPNHFEEQYHCYPVSFQDKEHLEDGDKILLPSSALDTLARLSVEYPMLFSITNEAEGKTTHCGVLEFSAPEGSCYIPFWMMSNLLLEPGGLITIKNVSLPKANFVKLQPQSVDFLDISNPRAVLERQLRHFSCVTKGDQLCIPYNARKYYLEIREVRPADAACIIETDCNVDFDAPVGYEEHLRKQQQQQRSASPASSLGG------DGALPIPAPMSGKAAPEGDADAAPAFVPFAGSGARLDGK-AAPPLSAADLAAXXXXXXXXXXXXXXXXXXX----------XXXXGDAAAQAVRPGKAPPAPARRFAAAGQFAKRKLQTGAFQGEGNKLS 343
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: D8LTQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ5_ECTSI) HSP 1 Score: 323 bits (827), Expect = 1.170e-105 Identity = 169/252 (67.06%), Postives = 195/252 (77.38%), Query Frame = 1 Query: 67 QGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEG-APSGAAMGTSGSAIGXXXXXXXXXXSSG-MRLPPPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAKAA 816 +GF EQYHCYPVSF+DKEHLE GDKILLPSSALD+LAR Q+EYPMLFE+SN ++ RTHCGVLEFSAPEGSCYIP+WMMQNLLLEAGSLLTVKN SLPK TFVKFQPQSVDFL+ISNPRAVLE +R +SC+T+GD+IC+PYN + Y L VKE+KP+ A I+ETD NVDFDAPVGY E A S A XXXXX ++G + +P P + KA K + + P F PF GGG RLDGK AK A Sbjct: 26 RGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRNYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESLAASNAXXXXXXXXXXXXXXXGSSSGATGAINIPAPASGKAPKPVDEA-PKFVPFGGGGARLDGKKTPAKGA 276
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S2V4N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N8_9STRA) HSP 1 Score: 315 bits (808), Expect = 5.330e-103 Identity = 172/276 (62.32%), Postives = 196/276 (71.01%), Query Frame = 1 Query: 19 FGDIAGAAGYPG----ANGGQGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEG------APSGAAMGTSGSAIGXXXXXXXXXXSSGMRLP--PPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAK 810 FG G G PG + Q F E YHC V F+DK HLEDGDKILLP SALD+LARL IEYPMLFE+S+ KRTHCGVLEFSAPEGS YIP+WMMQNL+LE G ++ +KN SLPKA++VKF+PQS+DFLDI+NPRAVLER LR +SCVT+GD ICIPYN+KKYYLEV EVKPA+AACIIETDCNVDF+APVGY+E A S XXXX SS LP P Q A+ K E P F F+GGGVRLDGKP+ K Sbjct: 2 FGGFGGGFGGPGMGMQGSFPQSFEEHYHCNSVVFQDKGHLEDGDKILLPPSALDTLARLHIEYPMLFEVSSVEAGKRTHCGVLEFSAPEGSAYIPFWMMQNLMLEEGGMVLIKNVSLPKASYVKFKPQSMDFLDITNPRAVLERALRSFSCVTKGDTICIPYNSKKYYLEVCEVKPADAACIIETDCNVDFEAPVGYEEHIQRQSQAASEKLSSXXXXXXXXXXXGSVGAASSNGVLPNVPVQQARRKKADEEGGPKFSAFSGGGVRLDGKPLNQK 277
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S3K3U4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U4_9STRA) HSP 1 Score: 308 bits (789), Expect = 2.510e-100 Identity = 160/260 (61.54%), Postives = 194/260 (74.62%), Query Frame = 1 Query: 46 YPGANGGQGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGA--PSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAKAAA 819 Y G G + F EQYHC+ +F DK LE+GDKILLPSSA + LARLQ+EYPMLFEI +++ RTHCGV+EF+APEG C +P+W+MQNLL E G+L++VKN SLPKA+FVKF+PQSVDFLDISNPRAVLERQLR +SCVT GD IC+PYN K+YYLEV+EVKPA+AACIIETDCNVDFDAPVGY+E PS T+GSA SSG + P+ KA + + + P+F+PF G G RLDGK + AA Sbjct: 9 YRGGYGMETFDEQYHCFSGAFSDKPQLEEGDKILLPSSAFEQLARLQVEYPMLFEI-RSSKGGRTHCGVMEFTAPEGQCIMPFWIMQNLLCEEGALISVKNVSLPKASFVKFKPQSVDFLDISNPRAVLERQLRTFSCVTVGDQICLPYNDKRYYLEVQEVKPADAACIIETDCNVDFDAPVGYQEPTRRPS-----TAGSA------------SSGGGIEAPEPIKARQSDDENAPSFKPFTGSGQRLDGKALKQNQAA 250
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S4A370_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A370_9STRA) HSP 1 Score: 292 bits (748), Expect = 2.340e-94 Identity = 155/252 (61.51%), Postives = 183/252 (72.62%), Query Frame = 1 Query: 73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKA-VKEGEPSKP--AFEPFAGGGVRLDGKPVTAKAAA 819 F EQYHCY +F DK LE GDKILLP+SA + LARLQI YPMLFE+ T KRTHCGVLEF+A EG+ Y+P+WMM NLLLE GS+L+V+N SLPKA FVKF+PQ VDFLDISNPRAVLE+QLR +SCVT GD IC+PYN ++YYLEV+EVKP +AACIIE DCNVDFDAPVGYKE P A + A +P PQ AK+ +E E +KP +F+ FAGGG RLDGK + A A+ Sbjct: 8 FDEQYHCYSGAFADKPQLEGGDKILLPASAFEQLARLQISYPMLFEL-RTQSGKRTHCGVLEFTAAEGNVYLPHWMMNNLLLEEGSVLSVRNVSLPKAKFVKFKPQHVDFLDISNPRAVLEKQLRMFSCVTVGDQICLPYNNRRYYLEVQEVKPRDAACIIECDCNVDFDAPVGYKE--PDYKAQAQAPKA----------------NVPAPQKAKSQAREEEENKPTESFKAFAGGGQRLDGKELKATQAS 240
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A6V1UUZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UUZ4_HETAK) HSP 1 Score: 291 bits (746), Expect = 1.610e-93 Identity = 150/268 (55.97%), Postives = 183/268 (68.28%), Query Frame = 1 Query: 67 QGFAEQYHCYPVSFE--DKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKE------------GAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSKPA----FEPFAGGGVRLDGKPVTAKAA 816 Q F E YHCY ++ DK HLE GDKI+LP+SALD+LARL IEYPMLF+I + K+THCGVLEFSAPEGSCY+P+WMMQNLLLE G ++ +KN SLPKATF K +PQSVDFLDISNPRAVLE LR YSCVT+GD++CIPYN K YYLE++EV+PA+AACIIETDCNVDF+ PVGY+E +G+A G+S + R P A + G P A F+ F G G RLDGKP+ +++ Sbjct: 12 QSFDEHYHCYSMACSGMDKAHLEAGDKIILPASALDTLARLHIEYPMLFQIEGSESGKKTHCGVLEFSAPEGSCYMPFWMMQNLLLEEGGMIKIKNVSLPKATFCKLKPQSVDFLDISNPRAVLEHTLRGYSCVTKGDVVCIPYNEKNYYLEIREVQPADAACIIETDCNVDFEEPVGYQEHLEKLKRTESKNSLDNGSASGSSRAGS------VYQRPKMRARRGPDPAAATGEGGAPGAAAAAARFQAFGGSGARLDGKPLRKQSS 273
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: F0Y6V8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6V8_AURAN) HSP 1 Score: 290 bits (742), Expect = 3.080e-93 Identity = 153/253 (60.47%), Postives = 182/253 (71.94%), Query Frame = 1 Query: 73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTA-KAVKEGEPSKPA---FEPFAGGGVRLDGKPVTAKAAA 819 F EQYHC+ +F DK +LE+GDK+LLPSSA + LARLQIEYPMLFE+ + RTHCGVLEF+APEG+CY+P+WMMQNL+LE G +L+VKN SLPKATFVKF+PQS DFLDISNPRAVLE+Q R +SC+T GD IC+PYN K++YLEV+EVKP EAACIIE DC VDFDAPVGY E + + TS + SS LP P A A KE E A F+ FAG G RLDGK + + AA Sbjct: 11 FDEQYHCFSGAFADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFELRSA--KGRTHCGVLEFTAPEGNCYVPFWMMQNLMLEEGGVLSVKNVSLPKATFVKFKPQSTDFLDISNPRAVLEKQFRTFSCLTVGDQICLPYNDKRFYLEVQEVKPREAACIIECDCEVDFDAPVGYTEPDYASRSRATSEA-------------SSMPDLPAPLKALSAAKEAEAKAKAEGNFKSFAGAGSRLDGKDLKSAQAA 248
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S2HLE7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLE7_9STRA) HSP 1 Score: 291 bits (746), Expect = 2.150e-92 Identity = 150/265 (56.60%), Postives = 185/265 (69.81%), Query Frame = 1 Query: 34 GAAGYPGANGG--QGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSK-PAFEPFAGGGVRLDGKPVTAKAAA 819 G GY G GG Q F EQYHCY V++ D+ HLE GDKILLP SA D+LARLQ++YPMLF++ + + THCGVLEF+A EGSCY+P+WMMQNLL+E GS+LTV N SLPKA+FVK QPQ VDFL+I+NPRAVLE LR +SC+T+GD+IC+PYN KKY E+KEVKP +AACIIETDCNVDFDAP+GYKE +G A ++G +S + P Q+A A E S P+ P + G+ G T AAA Sbjct: 4 GWGGYAGGRGGLPQRFEEQYHCYSVAYADRGHLEKGDKILLPPSAFDTLARLQVDYPMLFQLQSPTKGTMTHCGVLEFTAEEGSCYVPFWMMQNLLIEEGSVLTVTNVSLPKASFVKLQPQHVDFLEITNPRAVLEHALRNFSCITKGDVICVPYNEKKYQFEIKEVKPQDAACIIETDCNVDFDAPLGYKEPNVNGVAADDGTGSMGGNSSA-----ASSLANLPKQSAYAPAEQRSSDCPSPTPSSASGLSGAGSQQTGAAAA 263
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S4AUU4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUU4_9STRA) HSP 1 Score: 290 bits (742), Expect = 5.490e-92 Identity = 142/206 (68.93%), Postives = 166/206 (80.58%), Query Frame = 1 Query: 19 FGDIAGAAGYPGANGGQG----FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAA 624 FG G G G GG G F EQYHCY V++ DK HLE GDKILLP SA D+LARLQ++YPMLF++S+T +NK TH GVLEF+A EG+CYIP+WMMQNLL+E G+++TV N SLPKATFVK QPQSVDFL+ISNPRAVLE LR +SCVT+GDII +PYN K Y+ E+KEV+P +AACIIETDCNVDFDAPVGYKE SGAA Sbjct: 4 FGGGYGGYGVGGXXGGYGANRRFEEQYHCYSVAYADKPHLEKGDKILLPPSAFDTLARLQVDYPMLFKLSSTVDNKTTHSGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVTNASLPKATFVKLQPQSVDFLEISNPRAVLEHALRNFSCVTKGDIIQLPYNNKNYHFELKEVEPQDAACIIETDCNVDFDAPVGYKEPDYSGAA 209
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S3PZP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZP6_9STRA) HSP 1 Score: 285 bits (730), Expect = 5.320e-90 Identity = 135/193 (69.95%), Postives = 156/193 (80.83%), Query Frame = 1 Query: 73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIG 651 F EQYHCY V++ DK H E GDKILLP SA DSLARL IEYPMLF + ++ THCGVLEF+A EGSCYIP+WMMQNLL+E GS++TV N SLPKATFVK QPQ VDFL+I+NPRAVLE LR YSCVT+GD+IC+PYN+K Y+ E+KEVKP +AACIIETDCNVDFDAPVGYKE A+ G+SG G Sbjct: 15 FEEQYHCYSVAYADKSHHEGGDKILLPPSAFDSLARLDIEYPMLFRLESSDRGTSTHCGVLEFTAQEGSCYIPFWMMQNLLIEEGSVITVTNVSLPKATFVKLQPQHVDFLEITNPRAVLEHALRNYSCVTKGDVICLPYNSKNYHFELKEVKPKDAACIIETDCNVDFDAPVGYKE-PQRNASGGSSGDVNG 206 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1133.3.1 >prot_P-wetherbeei_contig1133.3.1 ID=prot_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=357bp MFGMGGFGDIAGAAGYPGANGGQGFAEQYHCYPVSFEDKEHLEDGDKILLback to top mRNA from alignment at P-wetherbeei_contig1133:4101..6624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1133.3.1 ID=mRNA_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2524bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:4101..6624- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1133:4101..6624- >mRNA_P-wetherbeei_contig1133.3.1 ID=mRNA_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:4101..6624- (Phaeothamnion wetherbeei SAG_119_79)back to top |