mRNA_P-wetherbeei_contig1133.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1133.3.1
Unique NamemRNA_P-wetherbeei_contig1133.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A836CM39_9STRA (Ubiquitin fusion degradation protein UFD1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM39_9STRA)

HSP 1 Score: 350 bits (898), Expect = 1.600e-116
Identity = 219/362 (60.50%), Postives = 249/362 (68.78%), Query Frame = 1
Query:    1 MFGMGGFGDIAGAAGYPGANGGQG-----FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEP-SKPAFEPFAGGGVRLDGKPVTAKAAAADRAXXXXXXXXXXXXXXXXXXXRPVXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAVRRPSAGKYARRASQTSAFQGSGNSLT 1068
            MFG G  G++    GY GA G +      F EQYHCYPVSF+DKEHLEDGDKILLPSSALD+LARL +EYPMLF I+N AE K THCGVLEFSAPEGSCYIP+WMM NLLLE G L+T+KN SLPKA FVK QPQSVDFLDISNPRAVLERQLR +SCVT+GD +CIPYNA+KYYLE++EV+PA+AACIIETDCNVDFDAPVGY+E          S S                + +P P + KA  EG+  + PAF PFAG G RLDGK      +AAD A XXXXXXXXXXXXXXXXXX           XXXX                 A R  +AG++A+R  QT AFQG GN L+
Sbjct:    1 MFGFG--GEMGYGGGYNGAGGARAAFPNHFEEQYHCYPVSFQDKEHLEDGDKILLPSSALDTLARLSVEYPMLFSITNEAEGKTTHCGVLEFSAPEGSCYIPFWMMSNLLLEPGGLITIKNVSLPKANFVKLQPQSVDFLDISNPRAVLERQLRHFSCVTKGDQLCIPYNARKYYLEIREVRPADAACIIETDCNVDFDAPVGYEEHLRKQQQQQRSASPASSLGG------DGALPIPAPMSGKAAPEGDADAAPAFVPFAGSGARLDGK-AAPPLSAADLAAXXXXXXXXXXXXXXXXXXX----------XXXXGDAAAQAVRPGKAPPAPARRFAAAGQFAKRKLQTGAFQGEGNKLS 343          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: D8LTQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ5_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.170e-105
Identity = 169/252 (67.06%), Postives = 195/252 (77.38%), Query Frame = 1
Query:   67 QGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEG-APSGAAMGTSGSAIGXXXXXXXXXXSSG-MRLPPPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAKAA 816
            +GF EQYHCYPVSF+DKEHLE GDKILLPSSALD+LAR Q+EYPMLFE+SN ++  RTHCGVLEFSAPEGSCYIP+WMMQNLLLEAGSLLTVKN SLPK TFVKFQPQSVDFL+ISNPRAVLE  +R +SC+T+GD+IC+PYN + Y L VKE+KP+ A  I+ETD NVDFDAPVGY E  A S A          XXXXX     ++G + +P P + KA K  + + P F PF GGG RLDGK   AK A
Sbjct:   26 RGFEEQYHCYPVSFQDKEHLEAGDKILLPSSALDALARQQVEYPMLFELSNPSQGNRTHCGVLEFSAPEGSCYIPHWMMQNLLLEAGSLLTVKNVSLPKGTFVKFQPQSVDFLEISNPRAVLETTMRHFSCLTEGDVICLPYNDRNYELAVKELKPSNAVGIVETDLNVDFDAPVGYDESLAASNAXXXXXXXXXXXXXXXGSSSGATGAINIPAPASGKAPKPVDEA-PKFVPFGGGGARLDGKKTPAKGA 276          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S2V4N8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4N8_9STRA)

HSP 1 Score: 315 bits (808), Expect = 5.330e-103
Identity = 172/276 (62.32%), Postives = 196/276 (71.01%), Query Frame = 1
Query:   19 FGDIAGAAGYPG----ANGGQGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEG------APSGAAMGTSGSAIGXXXXXXXXXXSSGMRLP--PPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAK 810
            FG   G  G PG     +  Q F E YHC  V F+DK HLEDGDKILLP SALD+LARL IEYPMLFE+S+    KRTHCGVLEFSAPEGS YIP+WMMQNL+LE G ++ +KN SLPKA++VKF+PQS+DFLDI+NPRAVLER LR +SCVT+GD ICIPYN+KKYYLEV EVKPA+AACIIETDCNVDF+APVGY+E       A S            XXXX      SS   LP  P Q A+  K  E   P F  F+GGGVRLDGKP+  K
Sbjct:    2 FGGFGGGFGGPGMGMQGSFPQSFEEHYHCNSVVFQDKGHLEDGDKILLPPSALDTLARLHIEYPMLFEVSSVEAGKRTHCGVLEFSAPEGSAYIPFWMMQNLMLEEGGMVLIKNVSLPKASYVKFKPQSMDFLDITNPRAVLERALRSFSCVTKGDTICIPYNSKKYYLEVCEVKPADAACIIETDCNVDFEAPVGYEEHIQRQSQAASEKLSSXXXXXXXXXXXGSVGAASSNGVLPNVPVQQARRKKADEEGGPKFSAFSGGGVRLDGKPLNQK 277          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S3K3U4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3U4_9STRA)

HSP 1 Score: 308 bits (789), Expect = 2.510e-100
Identity = 160/260 (61.54%), Postives = 194/260 (74.62%), Query Frame = 1
Query:   46 YPGANGGQGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGA--PSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSKPAFEPFAGGGVRLDGKPVTAKAAA 819
            Y G  G + F EQYHC+  +F DK  LE+GDKILLPSSA + LARLQ+EYPMLFEI  +++  RTHCGV+EF+APEG C +P+W+MQNLL E G+L++VKN SLPKA+FVKF+PQSVDFLDISNPRAVLERQLR +SCVT GD IC+PYN K+YYLEV+EVKPA+AACIIETDCNVDFDAPVGY+E    PS     T+GSA            SSG  +  P+  KA +  + + P+F+PF G G RLDGK +    AA
Sbjct:    9 YRGGYGMETFDEQYHCFSGAFSDKPQLEEGDKILLPSSAFEQLARLQVEYPMLFEI-RSSKGGRTHCGVMEFTAPEGQCIMPFWIMQNLLCEEGALISVKNVSLPKASFVKFKPQSVDFLDISNPRAVLERQLRTFSCVTVGDQICLPYNDKRYYLEVQEVKPADAACIIETDCNVDFDAPVGYQEPTRRPS-----TAGSA------------SSGGGIEAPEPIKARQSDDENAPSFKPFTGSGQRLDGKALKQNQAA 250          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S4A370_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A370_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.340e-94
Identity = 155/252 (61.51%), Postives = 183/252 (72.62%), Query Frame = 1
Query:   73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKA-VKEGEPSKP--AFEPFAGGGVRLDGKPVTAKAAA 819
            F EQYHCY  +F DK  LE GDKILLP+SA + LARLQI YPMLFE+  T   KRTHCGVLEF+A EG+ Y+P+WMM NLLLE GS+L+V+N SLPKA FVKF+PQ VDFLDISNPRAVLE+QLR +SCVT GD IC+PYN ++YYLEV+EVKP +AACIIE DCNVDFDAPVGYKE  P   A   +  A                 +P PQ AK+  +E E +KP  +F+ FAGGG RLDGK + A  A+
Sbjct:    8 FDEQYHCYSGAFADKPQLEGGDKILLPASAFEQLARLQISYPMLFEL-RTQSGKRTHCGVLEFTAAEGNVYLPHWMMNNLLLEEGSVLSVRNVSLPKAKFVKFKPQHVDFLDISNPRAVLEKQLRMFSCVTVGDQICLPYNNRRYYLEVQEVKPRDAACIIECDCNVDFDAPVGYKE--PDYKAQAQAPKA----------------NVPAPQKAKSQAREEEENKPTESFKAFAGGGQRLDGKELKATQAS 240          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A6V1UUZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UUZ4_HETAK)

HSP 1 Score: 291 bits (746), Expect = 1.610e-93
Identity = 150/268 (55.97%), Postives = 183/268 (68.28%), Query Frame = 1
Query:   67 QGFAEQYHCYPVSFE--DKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKE------------GAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSKPA----FEPFAGGGVRLDGKPVTAKAA 816
            Q F E YHCY ++    DK HLE GDKI+LP+SALD+LARL IEYPMLF+I  +   K+THCGVLEFSAPEGSCY+P+WMMQNLLLE G ++ +KN SLPKATF K +PQSVDFLDISNPRAVLE  LR YSCVT+GD++CIPYN K YYLE++EV+PA+AACIIETDCNVDF+ PVGY+E               +G+A G+S +                 R  P   A   + G P   A    F+ F G G RLDGKP+  +++
Sbjct:   12 QSFDEHYHCYSMACSGMDKAHLEAGDKIILPASALDTLARLHIEYPMLFQIEGSESGKKTHCGVLEFSAPEGSCYMPFWMMQNLLLEEGGMIKIKNVSLPKATFCKLKPQSVDFLDISNPRAVLEHTLRGYSCVTKGDVVCIPYNEKNYYLEIREVQPADAACIIETDCNVDFEEPVGYQEHLEKLKRTESKNSLDNGSASGSSRAGS------VYQRPKMRARRGPDPAAATGEGGAPGAAAAAARFQAFGGSGARLDGKPLRKQSS 273          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: F0Y6V8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6V8_AURAN)

HSP 1 Score: 290 bits (742), Expect = 3.080e-93
Identity = 153/253 (60.47%), Postives = 182/253 (71.94%), Query Frame = 1
Query:   73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTA-KAVKEGEPSKPA---FEPFAGGGVRLDGKPVTAKAAA 819
            F EQYHC+  +F DK +LE+GDK+LLPSSA + LARLQIEYPMLFE+ +     RTHCGVLEF+APEG+CY+P+WMMQNL+LE G +L+VKN SLPKATFVKF+PQS DFLDISNPRAVLE+Q R +SC+T GD IC+PYN K++YLEV+EVKP EAACIIE DC VDFDAPVGY E   +  +  TS +             SS   LP P  A  A KE E    A   F+ FAG G RLDGK + +  AA
Sbjct:   11 FDEQYHCFSGAFADKPNLEEGDKVLLPSSAFEQLARLQIEYPMLFELRSA--KGRTHCGVLEFTAPEGNCYVPFWMMQNLMLEEGGVLSVKNVSLPKATFVKFKPQSTDFLDISNPRAVLEKQFRTFSCLTVGDQICLPYNDKRFYLEVQEVKPREAACIIECDCEVDFDAPVGYTEPDYASRSRATSEA-------------SSMPDLPAPLKALSAAKEAEAKAKAEGNFKSFAGAGSRLDGKDLKSAQAA 248          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S2HLE7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HLE7_9STRA)

HSP 1 Score: 291 bits (746), Expect = 2.150e-92
Identity = 150/265 (56.60%), Postives = 185/265 (69.81%), Query Frame = 1
Query:   34 GAAGYPGANGG--QGFAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIGXXXXXXXXXXSSGMRLPPPQTAKAVKEGEPSK-PAFEPFAGGGVRLDGKPVTAKAAA 819
            G  GY G  GG  Q F EQYHCY V++ D+ HLE GDKILLP SA D+LARLQ++YPMLF++ +  +   THCGVLEF+A EGSCY+P+WMMQNLL+E GS+LTV N SLPKA+FVK QPQ VDFL+I+NPRAVLE  LR +SC+T+GD+IC+PYN KKY  E+KEVKP +AACIIETDCNVDFDAP+GYKE   +G A      ++G          +S +   P Q+A A  E   S  P+  P +  G+   G   T  AAA
Sbjct:    4 GWGGYAGGRGGLPQRFEEQYHCYSVAYADRGHLEKGDKILLPPSAFDTLARLQVDYPMLFQLQSPTKGTMTHCGVLEFTAEEGSCYVPFWMMQNLLIEEGSVLTVTNVSLPKASFVKLQPQHVDFLEITNPRAVLEHALRNFSCITKGDVICVPYNEKKYQFEIKEVKPQDAACIIETDCNVDFDAPLGYKEPNVNGVAADDGTGSMGGNSSA-----ASSLANLPKQSAYAPAEQRSSDCPSPTPSSASGLSGAGSQQTGAAAA 263          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S4AUU4_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUU4_9STRA)

HSP 1 Score: 290 bits (742), Expect = 5.490e-92
Identity = 142/206 (68.93%), Postives = 166/206 (80.58%), Query Frame = 1
Query:   19 FGDIAGAAGYPGANGGQG----FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAA 624
            FG   G  G  G  GG G    F EQYHCY V++ DK HLE GDKILLP SA D+LARLQ++YPMLF++S+T +NK TH GVLEF+A EG+CYIP+WMMQNLL+E G+++TV N SLPKATFVK QPQSVDFL+ISNPRAVLE  LR +SCVT+GDII +PYN K Y+ E+KEV+P +AACIIETDCNVDFDAPVGYKE   SGAA
Sbjct:    4 FGGGYGGYGVGGXXGGYGANRRFEEQYHCYSVAYADKPHLEKGDKILLPPSAFDTLARLQVDYPMLFKLSSTVDNKTTHSGVLEFTAEEGTCYIPFWMMQNLLIEEGAVITVTNASLPKATFVKLQPQSVDFLEISNPRAVLEHALRNFSCVTKGDIIQLPYNNKNYHFELKEVEPQDAACIIETDCNVDFDAPVGYKEPDYSGAA 209          
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Match: A0A7S3PZP6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZP6_9STRA)

HSP 1 Score: 285 bits (730), Expect = 5.320e-90
Identity = 135/193 (69.95%), Postives = 156/193 (80.83%), Query Frame = 1
Query:   73 FAEQYHCYPVSFEDKEHLEDGDKILLPSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWMMQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQYSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYKEGAPSGAAMGTSGSAIG 651
            F EQYHCY V++ DK H E GDKILLP SA DSLARL IEYPMLF + ++     THCGVLEF+A EGSCYIP+WMMQNLL+E GS++TV N SLPKATFVK QPQ VDFL+I+NPRAVLE  LR YSCVT+GD+IC+PYN+K Y+ E+KEVKP +AACIIETDCNVDFDAPVGYKE     A+ G+SG   G
Sbjct:   15 FEEQYHCYSVAYADKSHHEGGDKILLPPSAFDSLARLDIEYPMLFRLESSDRGTSTHCGVLEFTAQEGSCYIPFWMMQNLLIEEGSVITVTNVSLPKATFVKLQPQHVDFLEITNPRAVLEHALRNYSCVTKGDVICLPYNSKNYHFELKEVKPKDAACIIETDCNVDFDAPVGYKE-PQRNASGGSSGDVNG 206          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1133.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CM39_9STRA1.600e-11660.50Ubiquitin fusion degradation protein UFD1-domain-c... [more]
D8LTQ5_ECTSI1.170e-10567.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V4N8_9STRA5.330e-10362.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3K3U4_9STRA2.510e-10061.54Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4A370_9STRA2.340e-9461.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6V1UUZ4_HETAK1.610e-9355.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
F0Y6V8_AURAN3.080e-9360.47Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2HLE7_9STRA2.150e-9256.60Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4AUU4_9STRA5.490e-9268.93Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
A0A7S3PZP6_9STRA5.320e-9069.95Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1133contigP-wetherbeei_contig1133:4101..6624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LTQ5
Preferred nameUFD1L
PFAMsUFD1
Model size1071
Max annot lvl2759|Eukaryota
KEGG koko:K14016
KEGG Pathwayko04141,map04141
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000153,GO:0000502,GO:0000731,GO:0000835,GO:0000836,GO:0000837,GO:0000839,GO:0001501,GO:0001817,GO:0001818,GO:0002682,GO:0002683,GO:0002697,GO:0002698,GO:0002831,GO:0002832,GO:0003674,GO:0003824,GO:0004843,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006355,GO:0006357,GO:0006401,GO:0006464,GO:0006508,GO:0006511,GO:0006515,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006974,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0007275,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009605,GO:0009607,GO:0009615,GO:0009790,GO:0009792,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010646,GO:0010648,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016070,GO:0016072,GO:0016075,GO:0016485,GO:0016579,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0019538,GO:0019783,GO:0019899,GO:0019941,GO:0019985,GO:0023051,GO:0023052,GO:0023057,GO:0030162,GO:0030163,GO:0030433,GO:0030970,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031348,GO:0031593,GO:0031974,GO:0031981,GO:0031984,GO:0032101,GO:0032102,GO:0032182,GO:0032183,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032479,GO:0032480,GO:0032501,GO:0032502,GO:0032527,GO:0032879,GO:0032880,GO:0032933,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034098,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0034661,GO:0034976,GO:0035103,GO:0035966,GO:0035967,GO:0036211,GO:0036435,GO:0036459,GO:0036501,GO:0036503,GO:0039531,GO:0039532,GO:0039535,GO:0039536,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0043086,GO:0043130,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043900,GO:0043901,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045088,GO:0045184,GO:0045732,GO:0045862,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048856,GO:0050687,GO:0050688,GO:0050776,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051117,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051348,GO:0051603,GO:0051604,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0051716,GO:0051788,GO:0051972,GO:0051974,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0070651,GO:0070727,GO:0070887,GO:0070987,GO:0071218,GO:0071310,GO:0071501,GO:0071629,GO:0071702,GO:0071704,GO:0071705,GO:0071712,GO:0071897,GO:0080090,GO:0080134,GO:0090304,GO:0098586,GO:0098796,GO:0098827,GO:0101005,GO:0140030,GO:0140096,GO:1900180,GO:1900182,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901698,GO:1901800,GO:1902494,GO:1902531,GO:1902532,GO:1902680,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903506,GO:1903508,GO:1903513,GO:1903827,GO:1903829,GO:1905368,GO:1905369,GO:1990112,GO:1990116,GO:1990234,GO:2000058,GO:2000060,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001141
Exons4
Evalue1.91e-106
EggNOG OGsCOG5140@1|root,KOG1816@2759|Eukaryota
DescriptionER-associated misfolded protein catabolic process
Cds size1071
COG categoryO
BRITEko00000,ko00001,ko00002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185907.143731-CDS-P-wetherbeei_contig1133:4100..46701683185907.143731-CDS-P-wetherbeei_contig1133:4100..4670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1133 4101..4670 -
1683185907.1556885-CDS-P-wetherbeei_contig1133:5192..53301683185907.1556885-CDS-P-wetherbeei_contig1133:5192..5330Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1133 5193..5330 -
1683185907.1670632-CDS-P-wetherbeei_contig1133:6119..62541683185907.1670632-CDS-P-wetherbeei_contig1133:6119..6254Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1133 6120..6254 -
1683185907.1848006-CDS-P-wetherbeei_contig1133:6396..66241683185907.1848006-CDS-P-wetherbeei_contig1133:6396..6624Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1133 6397..6624 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1133.3.1prot_P-wetherbeei_contig1133.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1133 4101..6624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1133.3.1

>prot_P-wetherbeei_contig1133.3.1 ID=prot_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=357bp
MFGMGGFGDIAGAAGYPGANGGQGFAEQYHCYPVSFEDKEHLEDGDKILL
PSSALDSLARLQIEYPMLFEISNTAENKRTHCGVLEFSAPEGSCYIPYWM
MQNLLLEAGSLLTVKNKSLPKATFVKFQPQSVDFLDISNPRAVLERQLRQ
YSCVTQGDIICIPYNAKKYYLEVKEVKPAEAACIIETDCNVDFDAPVGYK
EGAPSGAAMGTSGSAIGGGSAAGGNGASSGMRLPPPQTAKAVKEGEPSKP
AFEPFAGGGVRLDGKPVTAKAAAADRAAAAGTGAATAAGAAAGAPGRPVS
AAAAAAAARAAAAAAAGPAPAPPPVPVAAVRRPSAGKYARRASQTSAFQG
SGNSLT*
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mRNA from alignment at P-wetherbeei_contig1133:4101..6624-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1133.3.1 ID=mRNA_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2524bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:4101..6624- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGGAATGGGAGGATTCGGTGACATAGCCGGCGCTGCCGGCTATCC GGGTGCGAATGGAGGGCAAGGGTTCGCGGAGCAATACCACTGCTACCCCG TGAGCTTTGAGGACAAGGAGCACCTCGAGGACGGCGACAAGATCTTGCTG CCGAGCTCAGCGCTCGATTCTCTCGCTCGGTTGCAGATTGAGTACCCTAT GCTTTTTGAAATCTCCAATACTGCAGAGGTAATGACGCGACACAGCCGAG GGGAAGTGCAAGCTTTTGCCGCACGATAAGCTTTACTGCGTCGCATGCAC CTACTTTCCGCTTCCCTGCGTATTTTAGCCCACCATCTATCGCTTCCCTC CTCTTGCACATCACCGGCAGAACAAGCGAACGCATTGTGGCGTCCTCGAG TTTTCTGCGCCGGAAGGATCATGCTACATCCCCTACTGGATGATGCAGAA CCTACTGCTGGAGGCCGGATCGCTGCTAACCGTCAAGAACAAGTCCTTGC CAAAGGTGCTTTGCCAATTTCGTTTGAACCCAAACCGTTCATTTTTTGCT CGCCTGTGCATCGTGACGTCATAACTGTACCTGTTCCCAGCTTCTTTTAT GGCACCGAGCATTTTATATTATAACTAATTCGGCTGATTTTTGCGCATCA GCCACCTCGCCCGCGAGGTGTTTGCGTATGCGGCGCCGATTCCGTGCCCG TACACGTTCGTAACCACGCTAGATGAACTACGCATTGCTGTTATGGTGTA AAGATGTGCTGGCGGCGCCTTGCGGCCGCTCAACCGCCGCGCCCCCATGC CGAATAGTTTGCGCGCGGACAGTTTTATGTGGAATTGAGCGTGTCTGTTT TTACAAAGGCCGTCGTGGTGACGCCAACAATTGCCGGTTCTTACGGTGTC TTTTCGGTAACATGGTTTCGCACATGCTGCATTACCGTACGCTAGGCCAA CCGCTGCCGCTTCGCTGCAGATTGTTCGTCTCACATTGTGCCTGGCTTTA GGCGGGCTGTGAGCCTTTTTGGTGGTTTCACAACCTCTCTAACGTTTCTT CCCGCTCGCCGCCTTTTCGTCATAATTTGCGTCCCCGCCTCGGCGCAACC GTGTTTCTGGGCGTCTGCTTCCGGGCACGCACTCTGGCCGCTCGCGGTGT GACGGCACATCTGTCGGCCGCGGAAACTTCGGCACCGGCGCTGCCTCGGC CGTTCGCGGTCGCGCGGACGAACGGACCGTCGAACGGCATGACGGCGCAC GGAAAATGATCGACGGACAAAATGAACGAACGAGCCAAAAACAGGCGACA TTTGTAAAGTTCCAGCCGCAGAGCGTCGACTTCCTGGATATTTCCAACCC GCGGGCAGTGCTGGAGCGGCAGCTGCGTCAGTACTCGTGCGTCACGCAGG GAGACATCATCTGCATCCCTTACAACGCCAAGGTTTGTCGAAGGGGTGTT AGAGAGAGTCTGAGTCGCCTCCGCCGGCCAAAATGGTTTTGGAGAAGGAA TTTCGGATAGAGAGGCGCGCGATTAAGCGAAAGTTGGCTGGCAGGCAGTT TGCGCGAGGCATGAGACGTAAAGTTTCAAGGTCCAGCATGCTTGCCAAGC CCTACTTTGATGGTAGCGTGTCCTTGACCTTCTGCGGATTAGGAGCTGTT TTGAGCATTTTCGGGAACAGCCTTTATCACTCCTTTCATAGCAGAGGCAG CGCGAGCAGACTGCAGCTAAATGGGACGGCGTGCAGGTTGATTTCTCCCC CTGAGTTTGCGAAGGTTTTGGATAGAGGTTTCTGTCGCAGGCCTATTTAC TTTCGAAAGCGTTCTGAGGGCCACCGCCGATCTCGTGCTGCCCCATCGGC TGCTTGCTCAAAGTCAATCATCGCTGCCGCCGCTGCCTTTTGTTAGAGAC AGGCTTTGCTTGACAGTAATTTGCTTTTCCTCTCTTGCCGGGTCACTCCA ACAGAAATACTACCTCGAGGTTAAGGAAGTGAAGCCCGCCGAGGCCGCTT GTATCATCGAAACCGACTGCAACGTCGACTTCGACGCTCCCGTCGGCTAC AAGGAGGGAGCTCCCTCCGGCGCAGCGATGGGGACCAGCGGCAGCGCCAT CGGCGGCGGGTCTGCTGCTGGCGGCAACGGCGCGTCCTCCGGCATGCGGC TTCCGCCGCCTCAGACCGCCAAGGCGGTGAAGGAGGGGGAGCCGAGCAAG CCGGCCTTCGAGCCGTTCGCTGGCGGCGGCGTACGGCTTGATGGAAAGCC CGTGACGGCAAAGGCAGCCGCGGCGGACAGGGCGGCGGCGGCGGGAACGG GGGCGGCGACGGCGGCGGGGGCGGCGGCGGGGGCGCCAGGCAGACCGGTG TCGGCGGCGGCTGCTGCCGCGGCGGCGAGGGCGGCGGCCGCGGCGGCGGC GGGACCGGCTCCAGCGCCCCCGCCTGTGCCGGTCGCTGCAGTGCGGCGCC CCTCGGCGGGGAAATACGCGCGCCGGGCGAGCCAAACGAGTGCCTTTCAG GGTTCGGGCAACTCGCTGACGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1133:4101..6624-

>mRNA_P-wetherbeei_contig1133.3.1 ID=mRNA_P-wetherbeei_contig1133.3.1|Name=mRNA_P-wetherbeei_contig1133.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1071bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:4101..6624- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTTGGAATGGGAGGATTCGGTGACATAGCCGGCGCTGCCGGCTATCC
GGGTGCGAATGGAGGGCAAGGGTTCGCGGAGCAATACCACTGCTACCCCG
TGAGCTTTGAGGACAAGGAGCACCTCGAGGACGGCGACAAGATCTTGCTG
CCGAGCTCAGCGCTCGATTCTCTCGCTCGGTTGCAGATTGAGTACCCTAT
GCTTTTTGAAATCTCCAATACTGCAGAGAACAAGCGAACGCATTGTGGCG
TCCTCGAGTTTTCTGCGCCGGAAGGATCATGCTACATCCCCTACTGGATG
ATGCAGAACCTACTGCTGGAGGCCGGATCGCTGCTAACCGTCAAGAACAA
GTCCTTGCCAAAGGCGACATTTGTAAAGTTCCAGCCGCAGAGCGTCGACT
TCCTGGATATTTCCAACCCGCGGGCAGTGCTGGAGCGGCAGCTGCGTCAG
TACTCGTGCGTCACGCAGGGAGACATCATCTGCATCCCTTACAACGCCAA
GAAATACTACCTCGAGGTTAAGGAAGTGAAGCCCGCCGAGGCCGCTTGTA
TCATCGAAACCGACTGCAACGTCGACTTCGACGCTCCCGTCGGCTACAAG
GAGGGAGCTCCCTCCGGCGCAGCGATGGGGACCAGCGGCAGCGCCATCGG
CGGCGGGTCTGCTGCTGGCGGCAACGGCGCGTCCTCCGGCATGCGGCTTC
CGCCGCCTCAGACCGCCAAGGCGGTGAAGGAGGGGGAGCCGAGCAAGCCG
GCCTTCGAGCCGTTCGCTGGCGGCGGCGTACGGCTTGATGGAAAGCCCGT
GACGGCAAAGGCAGCCGCGGCGGACAGGGCGGCGGCGGCGGGAACGGGGG
CGGCGACGGCGGCGGGGGCGGCGGCGGGGGCGCCAGGCAGACCGGTGTCG
GCGGCGGCTGCTGCCGCGGCGGCGAGGGCGGCGGCCGCGGCGGCGGCGGG
ACCGGCTCCAGCGCCCCCGCCTGTGCCGGTCGCTGCAGTGCGGCGCCCCT
CGGCGGGGAAATACGCGCGCCGGGCGAGCCAAACGAGTGCCTTTCAGGGT
TCGGGCAACTCGCTGACGTGA
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