mRNA_P-wetherbeei_contig1133.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE) HSP 1 Score: 210 bits (535), Expect = 2.860e-63 Identity = 133/245 (54.29%), Postives = 160/245 (65.31%), Query Frame = 3 Query: 147 GDIKYWDTSYGKALDEWEDAIAAGEKLSGEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQAS-TGQKQELFGKKR-----AAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPPNPA 863 GD+KYWDTSYGK LD+ + IA E SG+ R+ + EA RL GM+RSYNLEIKL++D KA YN EK+ KD R L R A+AS + ELFG +R AQGK +A+ KL EA + QD TE+AY +I VL ETE A NTA EL NQR+Q+ ITE V E++S L RADRLVKVFSKRMMTDKFIQ FGCLNV +V IIVYVV++QV LPG + P+PA Sbjct: 4 GDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMSEASRSLKRLAGMRRSYNLEIKLIKDPNMKAHYNLEKSQKDSRYATLQSRFDAAKASGDSTRDELFGGRRDVESGEAQGK----------SAEAKLTEADQYQDKTEAAYKNMIGVLQETEATADNTAVELTNQREQLARITEDVTEIDSLLTRADRLVKVFSKRMMTDKFIQCFGCLNVSAMVAIIVYVVVQQVELPGGDDNDVPDPA 238
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A835Z1V1_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V1_9STRA) HSP 1 Score: 202 bits (514), Expect = 3.590e-60 Identity = 122/232 (52.59%), Postives = 155/232 (66.81%), Query Frame = 3 Query: 144 MGDIKYWDTSYGKALDEWEDAIAAGEKLSGEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSS 839 MGD+KYWDTSYGKALDE D + A + S E++ K+ A RL GMKRSYNLEIKLMRDA QKA+Y EK +KD +L EL +L A K + G + + G AE + TAD+KLD+A +Q+ TE+ Y II+VL +TE+V TA L+ QR QI++ITE VME++ L RA++L+ VFS+R+ TDK IQ F +NV LV IIVYVVIK VGLPGSS Sbjct: 1 MGDVKYWDTSYGKALDELSDQVKAVKGASAAEKEAKIATATQTVRRLQGMKRSYNLEIKLMRDATQKASYQEEKNAKDAKLTELEAQLEEA------KNKPAGSDKVSLFSGRAAEEPKVKTADQKLDQAEIIQNKTEAKYKNIITVLEQTEEVGSATAATLQEQRAQISEITENVMEMDGMLTRANKLIMVFSRRLATDKMIQCFAFINVAALVAIIVYVVIKNVGLPGSS 226
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A835Z325_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z325_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.230e-44 Identity = 106/238 (44.54%), Postives = 142/238 (59.66%), Query Frame = 3 Query: 144 MGDIKYWDTSYGKALDEWEDAI-AAGEKLSGEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPP 854 MGD+++WD +YG LD E + E + +R + A + RL G+KRSYNLEIKL RD KA Y KA+KD RLE+L +L A+ G++ E RAA G E P AD KLD+A+ +QD TE+ Y +++VL +TE++ A L +QR Q+ I E V + +L RA +L+ VF KR+ TDKFIQ FG +NV LLVGII+YVVI + GL S S PP Sbjct: 1 MGDLQFWDGNYGNVLDGLESQLHQVREAYTPSDRDQLASTAASTVRRLQGIKRSYNLEIKLTRDTGLKAMYTDAKAAKDARLEQLEAQLEEARRKPGREAE-----RAALFDGRAIEMA--PAADAKLDQASAIQDKTEARYKNMVTVLAQTEEIGTAAAASLADQRTQMVAIDEDVKVMHENLTRAGKLLHVFGKRLATDKFIQCFGFVNVALLVGIILYVVITKTGLSSSGASNPP 231
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A7S4A3K9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3K9_9STRA) HSP 1 Score: 116 bits (290), Expect = 2.240e-26 Identity = 82/231 (35.50%), Postives = 124/231 (53.68%), Query Frame = 3 Query: 120 GSPASSSTMGDIKYWDTSYGKALDEWEDAIAAGEKLSGEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVI 812 G+P + DI YW SY ++D+ + + + +ER + A A R G+K+SY LE++L+RD K Y D R +EL R+ + T ++ L + AA G+ G D LD+A +QD TE+ R ++ +++V +T EL Q+DQI D++ +M +E +L RADRL++ F+KRMMTDK I F LN+C L GIIVY V+ Sbjct: 52 GTPPRRTMSTDIDYWSDSYRSSIDDADRLVTSLGACEPDERLSIIDAADAKLKRAGGIKKSYKLELRLLRDRELKRNYEESLRELDDRRDELKRRVEEHRERT-ERSTLLQETPAAFGEHKGN--------DYYLDKAHSLQDKTENTLERTTQMIEASKEVGASTLSELERQQDQIKDVSADIMLIEDNLSRADRLIRNFTKRMMTDKLIMGFAFLNMCALTGIIVYCVV 273
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A7S2V573_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V573_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.990e-25 Identity = 80/240 (33.33%), Postives = 125/240 (52.08%), Query Frame = 3 Query: 153 IKYWDTSYGKALDEWEDAIAAGEKLS--GEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPPNPAS 866 ++YWD +D+ E EKL E E + G+K+S+ E++L+ D ++ Y + + R+ L+ RL ++ + ++ + G A Q +GGG D L +A ++QD E AYGR + L E +A T ELRNQR++I DITET ++ L RADRL++ F +RM TD+ IQ+F +N CLL+ +I+Y ++ L G S S P+P S Sbjct: 1 MEYWDERINSLIDQGE---REAEKLDMDNETAMEACQEIEHCLQSAKGVKQSFTTELRLLGDKVEEQHYKMKLRRYEERMSALTERLNGSREAIEKEHLMRG---AQQRRGGGGFGDSDDPNDAMLGKAEKLQDDIEDAYGRAENDLDEIRQLAPETLAELRNQREKIQDITETAERIDDLLTRADRLLRTFGRRMATDRLIQVFFFINACLLLAVIIYAIVSDSNLTGGSGSKAPDPNS 234
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: B8BZJ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ7_THAPS) HSP 1 Score: 105 bits (262), Expect = 4.550e-23 Identity = 70/195 (35.90%), Postives = 108/195 (55.38%), Query Frame = 3 Query: 285 DGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRL-EELSVRLTTAQASTG--QKQELFGKKRAAQGKGGG--AEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPP 854 +G K+SY +E +L+ D QK Y +K RL EELS +A G Q+ ELF R +GGG E + D L + +QD T+++ ++ +++V T +EL QR+QI ++ M +E +L+RAD+L+K F KRM TD+FIQ F C+N+ LLVG+++Y ++K+ L G P Sbjct: 18 NGTKKSYKMETRLVADPNQKRMYE----NKLSRLSEELSSCANDLKAMKGGMQRGELFVGARGKSSRGGGEYGEMSGEEAGDSMLSDMNNIQDKTKNSLANTKHMVAASKEVGEATMEELLRQREQIRNVDNEAMRIEDNLQRADKLIKTFGKRMATDRFIQCFACINILLLVGVVIYTILKKGSLTGGENEGAP 208
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A7S3PTS2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTS2_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.280e-22 Identity = 71/225 (31.56%), Postives = 125/225 (55.56%), Query Frame = 3 Query: 144 MGDIKYWDTSYGKALDEWEDAIAAGEKLSGE-ERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIK 815 M DI+YW + ++ + + + S + ER L +A+ RS+ +EI+L+ D +++ Y E + + + +L+ + + S G + +LF A +G +P+ D LD A+R+QD T + G ++ +++ VA +T + L+ QR+QI +I V+ V+ +L RAD+L+K F KRM TDK IQ F C+N+ L+VG+++Y+VIK Sbjct: 1 MADIQYWKDAIVGEIETVRNLVQVAQNTSDDLERSASLEKAEKGLRSTKSNTRSFKMEIRLVFDHNERSKYERELTNFEQSISQLTAEIKNLR-SGGARSQLFMGANAGEGTSLNEDPV--AAGDAVLDGASRLQDKTGQSLGNTKQMIADSKMVASSTVEALKQQREQITNIEGDVLRVKDNLNRADKLIKNFGKRMATDKLIQCFACVNIMLVVGVVLYLVIK 222
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: F0YJK0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK0_AURAN) HSP 1 Score: 101 bits (251), Expect = 4.480e-21 Identity = 70/193 (36.27%), Postives = 106/193 (54.92%), Query Frame = 3 Query: 249 KLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGL 827 ++ E A R ++RSY LE++L+RD A K TY + D R E+ + + S+ +QEL G A G A LD+A ++QD T+ A R + ++ + +V + EL Q++Q DIT VM +E +L RAD+L++ F+KRMMTDK I F +N+C L+GI+VY V+ GL Sbjct: 78 RVSECDAKLCRAQSIRRSYCLEVRLLRDKAIKRTYEQKLKGLDTRCTEIRHDIECTRGSSN-RQELLGAPPAHSDFKGNAN---------YLDDAGKIQDQTQDALSRTMHLVEASSEVGHSALNELERQQEQARDITTDVMIIEDNLTRADKLIRNFTKRMMTDKLIVCFAFVNMCGLIGIVVYCVVTGRGL 260
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: A0A7S3L437_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L437_9STRA) HSP 1 Score: 101 bits (251), Expect = 5.680e-21 Identity = 71/241 (29.46%), Postives = 123/241 (51.04%), Query Frame = 3 Query: 144 MGDIKYWDTSYGKALDEWEDAIAAGEKL-SGEERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFGKKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPPNPA 863 M DI+YWD + + + + + L G E+ + + K G KRS+ +EI+L++D Q+ Y + AS D +L +L +A + + G + G G E D+ L A+++QD T+ + +++ ++++V T +EL QR + +I ++ +L RA++L+K F KRM TD FIQ F +N LL+G+++Y ++K GL + TP NPA Sbjct: 52 MTDIQYWDDTLSEEIQVIQSQLDRVPGLRDGVEKASAIDKLKKKIRGAKGTKRSFKMEIRLVQDVNQRRKYESRLASLDQQLSKLVADCKAIEAENNRGELFVGGEEGENGNGMSGEE----GGDKMLAAASQLQDKTQDSLANTKNMIAQSKEVGMATLEELERQRGVLENIDREADRIDDNLARAEKLLKQFGKRMATDSFIQCFAMVNCLLLLGVVLYAILKGGGLSSGNDGTPKNPA 288
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Match: B7G5Z1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5Z1_PHATC) HSP 1 Score: 100 bits (248), Expect = 8.230e-21 Identity = 80/252 (31.75%), Postives = 128/252 (50.79%), Query Frame = 3 Query: 144 MGDIKYWDTSYGKALDEWEDAIAAGEKLSGE---ERQRKLGEAKAMKSRLDGMKRSYNLEIKLMRDAAQKATYNAEKASKDLRLEELSVRLTTAQASTGQKQELFG----------KKRAAQGKGGGAEPLRQPTADEKLDEATRVQDATESAYGRIISVLVETEDVAGNTAQELRNQRDQINDITETVMEVESSLKRADRLVKVFSKRMMTDKFIQLFGCLNVCLLVGIIVYVVIKQVGLPGSSTSTPPNP 860 M DI+YWD + + ++ + + K++G ERQ + AKA G KRS+ +E +L++D + Y AS D L+ LS L ++ + ELF K++ G G D L EA+ +QD T+ + + + E+++V +T +EL QRD IN I + ++ +L RA+ L+K F KRM +D FIQ F +N LL+G+++Y VIK GL ++ TP +P Sbjct: 1 MADIQYWDDTLTEEIENVQSMLDHISKMNGHNPMERQSAIDRAKARLRSATGTKRSFKMECRLVQDVNGRRKYEKRLASLDQTLKMLSADLKALESEQA-RGELFVSADYDDDNPFKRQEMDGAQAG---------DSMLKEASGIQDKTQESLMNTRNRITESKEVGISTLEELERQRDVINSIEKETDRIDDNLARAEVLLKQFGKRMASDHFIQCFALINCLLLLGVVLYAVIKGGGLGLGNSGTPASP 242 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1133.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1133.2.1 >prot_P-wetherbeei_contig1133.2.1 ID=prot_P-wetherbeei_contig1133.2.1|Name=mRNA_P-wetherbeei_contig1133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=249bp MGDIKYWDTSYGKALDEWEDAIAAGEKLSGEERQRKLGEAKAMKSRLDGMback to top mRNA from alignment at P-wetherbeei_contig1133:2589..3637- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1133.2.1 ID=mRNA_P-wetherbeei_contig1133.2.1|Name=mRNA_P-wetherbeei_contig1133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1049bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:2589..3637- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1133:2589..3637- >mRNA_P-wetherbeei_contig1133.2.1 ID=mRNA_P-wetherbeei_contig1133.2.1|Name=mRNA_P-wetherbeei_contig1133.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=747bp|location=Sequence derived from alignment at P-wetherbeei_contig1133:2589..3637- (Phaeothamnion wetherbeei SAG_119_79)back to top |