mRNA_P-wetherbeei_contig1132.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: D8LJA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJA9_ECTSI) HSP 1 Score: 149 bits (377), Expect = 4.020e-40 Identity = 102/277 (36.82%), Postives = 132/277 (47.65%), Query Frame = 1 Query: 1 MSASLTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDAT----------------------------------------PTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGPGAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPLMIGVVAAAYVALWR 711 M L G +LIAFGP L WL S AS+LWT P A++ WLL +I GV L F R+ ++Y + E VI +A P + SS +L LN V+SSIAAGVGWG +H I GT L+++ GPGAA+S +CP VP V+ S+ A F+ LD+ L F+ A S D ++ F LHFAA+L T + I GGC ASLPL+ GVVA A +AL R Sbjct: 1 MGLVLVAGCSLIAFGPSIMLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLWTIVPAAQDAWLLSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPASNAHGSSGRYGGALGAEGSGGVGEGRGERKTGDVPDQPEESSGLL-RLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGAAFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFA-----AARSGDAGLMSFSFGLHFAAALTTGFNFIEGGCTASLPLLYGVVALAAIALTR 271
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: W7TG16_9STRA (Protein binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TG16_9STRA) HSP 1 Score: 115 bits (287), Expect = 2.470e-27 Identity = 78/241 (32.37%), Postives = 121/241 (50.21%), Query Frame = 1 Query: 4 SASLTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAE-NRGPGAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPLMIGVVAAAYVALWRRWRK 723 +A L G+ LI F P + + +LV+ LL+S LW F ++ ++++ GV Q R RLY R E +I A + + LND+TSS+AAG G+G MH + FG+VLA N PG ++ +C R PLV+ + +AL F +D++ L F + GV +F++H AAS T+L+++ GC SLPL+ V+ A + +R WR+ Sbjct: 3 AAGLMWGAGLIVFSPISCVFILVVTRRPELVIIAISGAFAYLVALLLSSALWAMFGPVKQTAAIMVVLGVLCQVVMRAVLYRLYHRTEILIKSAN------HPVLHMPLNDITSSLAAGTGYGLMHAVMIFGSVLASGNSDPGVLFAPSCTRTPLVVVLALLALAFTMMDLSFMALTFLYL---RRRKCFRMGV--IFLMHSAASGLTILNDVENGCTMSLPLVYVVMVATVLVTFREWRQ 232
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A3R7KS73_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A3R7KS73_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.320e-24 Identity = 74/243 (30.45%), Postives = 109/243 (44.86%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPLMIG----VVAAAYVALWRRWRKH 726 L +G L+ FGP A+L WLV+ L+ + LW P + + GV +QE R+ F LY R E + T + Q+ LND+TSS+A GVG+ MH + FG++ + G GAA+S +C +PL+ ++ L ALDVAL + F V VFV+H +L L + GC S+P+ A A +WR W++H Sbjct: 12 LLIGCILVGFGPLASLFFVVIAKRAQLVIIALSGAFTWLVAILVTATLWQIIPPLKTSLSATVPVGVVVQEGFRMLFFYLYTRTELAVKKVTTSSHQLP------LNDITSSLAGGVGFSVMHALMMFGSLAGSSTGSRGAAFSSSCESIPLIFSAAISTLALTALDVALMVVAFDGY-----RKRSALAVGAVFVIHMGVALSGLANMDTNGCYISIPVHYAGAALACAGAMTIVWR-WKRH 242
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: H3GHV0_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3GHV0_PHYRM) HSP 1 Score: 105 bits (263), Expect = 9.940e-24 Identity = 76/238 (31.93%), Postives = 106/238 (44.54%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPL-MIGVVAAAYVALWRRWR 720 L G L+ FGP AAL WLV+ L+ + LW P + + GV +QE R+ F LY R E + T Q+ LNDVTSS+A GVG+ MH + FG+++ + G GAA+S +C +PLV ++ L ALDVAL + F V VFV+H +L L + GC S+P+ G A+ A+ WR Sbjct: 12 LLFGCILVGFGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTASLWQIIPPLKTSLSATVPVGVVVQEAFRLLFFHLYTRTEAAVKKVTTASHQLP------LNDVTSSLAGGVGFSVMHALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGY-----RKRSAMAVGAVFVIHMGVALSALANMNTNGCYISIPVHYAGAALASAGAMTIVWR 238
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A484DSN2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSN2_BRELC) HSP 1 Score: 103 bits (258), Expect = 5.290e-23 Identity = 73/238 (30.67%), Postives = 107/238 (44.96%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRG-PGAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPLMIGVVA----AAYVALWR 711 L G L+ FGP AA+ WL++ L+ + LW P + + GV +QE R+ F LY R E + T + Q+ LNDVTSS+A GVG+ MH + FG+++ + G GAA+S +CP +PLV ++ L ALDV+L L F V+ V ++H +L L + GC S+P+ A A + LWR Sbjct: 12 LFFGCILVGFGPLAAVFFTIIAKRAQLVIISLSGAFVWLIAILVTATLWQIIPALKTSLSATVPVGVVVQEAFRVLFFYLYTRTELAVKRVTTSSHQLP------LNDVTSSLAGGVGFSLMHALLMFGSLMGSSTGLRGAAFSNSCPAIPLVFSAALSTLALTALDVSLMVLAFDGY-----RKRSALIVSAVIIIHMGIALSALANMDTNGCYISIPVHYAGAAIACTGASLILWR 238
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A8K1C7Q9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7Q9_PYTOL) HSP 1 Score: 102 bits (255), Expect = 1.410e-22 Identity = 76/239 (31.80%), Postives = 111/239 (46.44%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATP-THQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPL-MIGV---VAAAYVALWR 711 L G LIAFGP AL WLVS L+++ LW P + I+ V +QE R F Y R E + T THQ + LND+TSS+A GVG+ MH + +G+V+A + G GAA+S +C +PL+ ++ L +DVAL + F + + + GV VLH +L L ++ GC ++P+ +G VA A+ L R Sbjct: 12 LFFGCILIAFGPLTALFFMVVSKRAQLTIIALSGAFVWLVSILISATLWMIIPPLKSSIEATIVISVIIQEVFRFVFFHFYTRTELAVQKVTTATHQ-------LPLNDITSSLAGGVGFSIMHSVMMYGSVVASSTGSRGAAFSPSCESIPLIFSGAFSTLALTIMDVALMIIAFHGY-----RNRNFVLIGGVGVLHLGVALSALANQNTNGCTIAIPIHYVGALLSVAGAWTILGR 238
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A0P1A6Q5_PLAHL (Gammasecretase subunit aph n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6Q5_PLAHL) HSP 1 Score: 102 bits (255), Expect = 1.440e-22 Identity = 76/238 (31.93%), Postives = 108/238 (45.38%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPL-MIGVV---AAAYVALWR 711 L G LI FGP AAL WLV+ L+ + LW P + + GV +QE R+ F LY R EK + T + Q+ LND+TSS+A GVG+ MH + FG+++ + G GAA+S +C +PL+ ++ L ALDVAL + F + VF +H +L L + GC S+P+ G V A A + LWR Sbjct: 12 LFFGCILIGFGPLAALFFFVVAKRAQLVILALSAAFVWLVAILVTATLWHLIPPLKTSLSATVPVGVVVQEAFRMLFFYLYTRTEKAVKRVTTSSHQLP------LNDITSSLAGGVGFSAMHALLMFGSLVGSSTGSRGAAFSSSCESIPLIFSAALSTLALTALDVALMVVAFDGY-----RKRSVLIITVVFGIHMGVALSALANMDTNGCYISIPVHYAGAVLACAGAVMILWR 238
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: K3X4S5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4S5_GLOUD) HSP 1 Score: 101 bits (252), Expect = 3.840e-22 Identity = 71/240 (29.58%), Postives = 109/240 (45.42%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPLMIG---VVAAAYVALWRRWR 720 L G L AFGP AAL WLV+ L+ + LW P ++ I GV +QE R F LY R E+ + H+ +S LND+TSS+A G+G+ MH + +G+++ + G GAA++++C VPL+ ++ L +DVAL + F + VFV+H +L L ++ GCA ++PL V A + RW+ Sbjct: 12 LFFGCILTAFGPLAALFFVVVAKRAQLVIIALSGAFTWLVAILVTATLWRIIPPLKDSIEATIPVGVVIQEAFRYVFFVLYTRTERAV------HKVTTSPSQFPLNDITSSLAGGLGFSLMHALMMYGSLVGSSTGSRGAAFTKSCESVPLIFAAALSTLALTLMDVALMIVAFDGY-----RKKSFLAIGTVFVIHLGVALSALANQKTNGCAVAIPLHFAGALVATGAAATMISRWK 240
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A2D4BUP9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BUP9_PYTIN) HSP 1 Score: 95.9 bits (237), Expect = 5.600e-20 Identity = 67/221 (30.32%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATP-THQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPL 669 L G L AFGP A+L WL+S L+ + +W P + I V LQE R F +Y R E+ + T THQ + LND+TSS+A GVG+ MH + +G+V+A + G GAA+S +C +PL+L + L +DVAL + F + + V ++H +L L ++ GC S+P+ Sbjct: 12 LFFGCILTAFGPLASLFFVVIAKRAQLVILALSGAFLWLISILVTATIWRIIPPLKTSLEATIPLSVVLQEVFRYLFFVMYTRTEQAVQKVTTATHQ-------LPLNDITSSLAGGVGFSLMHSLMMYGSVVASSTGSRGAAFSSSCESIPLILSGALSTLALTVMDVALMVIAFQGY-----RKMNAMLIGLVALIHLGVALSALANKSTNGCMVSIPI 220
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Match: A0A3M6VQE8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQE8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 4.160e-18 Identity = 65/220 (29.55%), Postives = 96/220 (43.64%), Query Frame = 1 Query: 13 LTVGSALIAFGPPAALXXXXXXXXXXXXXXXXXXXXXWLVSALLASLLWTAFPVAREQWLLVIIGGVSLQEFTRIGFVRLYKRAEKVILDATPTHQQMSSAMLVELNDVTSSIAAGVGWGTMHGAIFFGTVLAENRGP-GAAYSEACPRVPLVLFSSWVALLFIALDVALSGLMFSSVGGGAGSSSDPSGVAGVFVLHFAASLPTLLHEIPGGCAASLPL 669 L G L+ FGP A+L WLV+ L+ + LW P + I GV +QE R+ F LY E + T + Q+ LND+TSS+A GVG+ MH + FG++L + G GAAYS +C +PL+ ++ L +DV L + F + VF +H +L L + GC S+P+ Sbjct: 12 LFFGCILLGFGPLASLFFIVVAKRAQLVIISLSGAFIWLVAILVTASLWHLIPPLKTSLAATIPLGVIVQEVFRLLFFYLYTHTELAVKRVTTSCHQLP------LNDITSSLAGGVGFALMHSLLMFGSLLGSSTGSRGAAYSTSCDNIPLIFSAAISTLALTIIDVGLMIIAFDGY-----RKRSVLLIGTVFGIHMGVALSALANLDTNGCFISIPV 220 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1132.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1132.3.2 >prot_P-wetherbeei_contig1132.3.2 ID=prot_P-wetherbeei_contig1132.3.2|Name=mRNA_P-wetherbeei_contig1132.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MSASLTVGSALIAFGPPAALIVLIVAQRASLLILLVTSAFFWLVSALLASback to top mRNA from alignment at P-wetherbeei_contig1132:1512..2697- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1132.3.2 ID=mRNA_P-wetherbeei_contig1132.3.2|Name=mRNA_P-wetherbeei_contig1132.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1186bp|location=Sequence derived from alignment at P-wetherbeei_contig1132:1512..2697- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1132:1512..2697- >mRNA_P-wetherbeei_contig1132.3.2 ID=mRNA_P-wetherbeei_contig1132.3.2|Name=mRNA_P-wetherbeei_contig1132.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig1132:1512..2697- (Phaeothamnion wetherbeei SAG_119_79)back to top |