mRNA_P-wetherbeei_contig113.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A835ZQC8_9STRA (Ribosomal protein rpS22, plastidal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQC8_9STRA) HSP 1 Score: 255 bits (651), Expect = 4.030e-79 Identity = 135/226 (59.73%), Postives = 172/226 (76.11%), Query Frame = 2 Query: 254 AVGAKQ-MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISD--LEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922 + G++Q + A M+++++KP+LI+GNNIDVTPALMDYVNK+++ V++KLG VTKVDVHL+VNKNPR+ +GHVAEVT +A T +IRA E +++MY+SIDLVSDR+ RKLRKYKER + QKR R S+ AA E E AF + G D +D L +VDMSVVK KSFPMPP TVE+AV LEYIDHDFYVF+N + +NVVYKRNHGGVG I+PE+ Sbjct: 47 STGSRQVLKAVMQDSARKPVLITGNNIDVTPALMDYVNKKMDKVVEKLGGVVTKVDVHLSVNKNPRIADGHVAEVTCYAKGT-IIRATEHTDSMYSSIDLVSDRMGRKLRKYKERSLTQKRSRTSISEAAGEVEEAFTPDSADGGE---------PDYADDGLPHVDMSVVKSKSFPMPPCTVEDAVTALEYIDHDFYVFRNSATSEVNVVYKRNHGGVGHIQPER 262
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A835ZBG9_9STRA (Ribosomal protein S30Ae/sigma 54 modulation protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG9_9STRA) HSP 1 Score: 244 bits (622), Expect = 9.000e-75 Identity = 128/224 (57.14%), Postives = 167/224 (74.55%), Query Frame = 2 Query: 272 MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAF-------EKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922 + A M+++++KP+LI+GNNID+TPAL +YVNK+++ V++KLG VTKVDVHL+VN+NPRV + H+AEVT+FA K +RAAE +++MYASIDLV+D ++RKLRKYKER + QKRHRA L A E+E + E+EG G VP VDMSVVK+K FPMPP TVE+AV+ + YIDHDFYVF+N +G INVVYKRNHGGVG I+PE+ Sbjct: 53 LKAVMQDSTRKPVLITGNNIDLTPALNEYVNKKMDKVVEKLGGVVTKVDVHLSVNRNPRVADSHIAEVTVFA-KGATLRAAEKTDSMYASIDLVTDSMARKLRKYKERSLTQKRHRAPLSEIAGESEAKWTSDDGDEEEEGFEGGDGVP-------------RVDMSVVKKKEFPMPPCTVEDAVVAMAYIDHDFYVFRNSATGEINVVYKRNHGGVGHIQPER 262
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6V1KPF4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KPF4_HETAK) HSP 1 Score: 216 bits (549), Expect = 4.170e-64 Identity = 116/227 (51.10%), Postives = 160/227 (70.48%), Query Frame = 2 Query: 245 TRVAVGAKQMTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY-VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEK 922 TR + + +M+AS + KKPIL++GNNID+TP++ +YV K++ NVL K+G DVTKVD HL V++NPR+ N H AE+T++ +K V+RA E SE+MY +IDLVSD + KLRKYKE+++D+KR AE + +P V + T +DL+ V+M VVK KSFPMPP +VE+AV+ LEYIDHDFYVF+N+ + +NVVYKRN GGVG I+PE+ Sbjct: 32 TRAPMASLRMSASFSD--KKPILVTGNNIDMTPSIKEYVEKKMNNVLSKVGGDVTKVDCHLTVDQNPRIENSHKAEITVY-TKGAVVRATEQSEHMYGTIDLVSDTIFMKLRKYKEKRIDRKR---------GTAEARMDPVVLP--EEVEDSDTEEDVYNDLDASVNMDVVKEKSFPMPPMSVEDAVVSLEYIDHDFYVFRNEKTSEVNVVYKRNSGGVGHIQPER 244
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S2CSI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CSI1_9STRA) HSP 1 Score: 206 bits (525), Expect = 1.720e-60 Identity = 118/221 (53.39%), Postives = 154/221 (69.68%), Query Frame = 2 Query: 272 MTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAA-----EAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919 +TA ++PI+++GNN++VTPA+++YVNK+L+ VLDK VTK DVHL V NPRV H AEVT+ A K V+R +E SENMYA+ID V+D ++RKLRK+KERK D+K+ +++ A A + EV +E AG P +VDMS+VK+KSF M P TVE+AVLCLEYIDHDFYVF+NK++G +NVVYKRN GGVG IEPE Sbjct: 41 ITAMSSIPDRQPIIVTGNNVEVTPAMLEYVNKKLDKVLDKHRQVVTKCDVHLTVVHNPRVKESHRAEVTL-AVKGLVMRTSEDSENMYATIDAVADSLARKLRKFKERK-DKKQSSSAIRDADALNLSEDEEVESPEEDAFAGAVEIPR-----------FVDMSIVKQKSFNMEPITVEDAVLCLEYIDHDFYVFRNKETGEVNVVYKRNSGGVGHIEPE 248
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6H5KRW8_9PHAE (Ribosom_S30AE_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRW8_9PHAE) HSP 1 Score: 200 bits (509), Expect = 7.790e-58 Identity = 111/211 (52.61%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 299 KKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVD----MSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919 + PI+++GNN++VT L +YV K++ VLDK+G+ V+KVDVHL+VNKNP V++ H EVT+F SK VIRA + S+NMYAS+D V+DR+ RKLR++KERKV R R+ L A + E EK+ A A D + +Y D M+V+K KSFPMP +VEEAV CLEYI HDFY+F+N+++ +NVVYKR GGVGLIEPE Sbjct: 65 RAPIIVTGNNVEVTEPLKEYVEKKMAKVLDKVGSSVSKVDVHLSVNKNPSVSDNHNTEVTVF-SKNHVIRATDNSDNMYASVDQVTDRIQRKLRRFKERKVAGMRGRSGLRALS---EKTAEKDMDAAAV-----EAADEDPFEDKYGDKPEAMTVMKTKSFPMPAISVEEAVTCLEYIGHDFYLFRNEETNEVNVVYKRKSGGVGLIEPE 266
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A6T8LT77_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8LT77_HEMAN) HSP 1 Score: 194 bits (494), Expect = 7.150e-56 Identity = 111/215 (51.63%), Postives = 144/215 (66.98%), Query Frame = 2 Query: 278 ASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGH-INVVYKRNHGGVGLIEPE 919 A ++ A+ PILISGNNI+VTPA+ DYVNK+ LDK+G VTK DVHL ++NP ++ + EVT+FA K IRA + +++MYA+ID VSD + RKLRKYKER +D R + E E++ +E T V +DI D+ DMS ++ K+F M P ++EEAVLCLEYIDHDFYVFKNKD G+ + VY RN GGVGLIEPE Sbjct: 40 APLRMAANVPILISGNNIEVTPAIKDYVNKKFGKALDKVGKQVTKCDVHLIYDQNPAISTPNHVEVTLFA-KGATIRAHKNNDDMYATIDEVSDTIKRKLRKYKERIIDTHRQGKAEAQGVTEEEISMFEEF---NTEVM-EEMKKSDIVDVPAPDMSSIQTKTFSMEPISLEEAVLCLEYIDHDFYVFKNKDKGNKVQCVYNRNAGGVGLIEPE 249
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S0F1P1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1P1_9CRYP) HSP 1 Score: 195 bits (495), Expect = 1.360e-55 Identity = 111/214 (51.87%), Postives = 145/214 (67.76%), Query Frame = 2 Query: 284 MKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY--VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919 M A K PI ISGNN+++TPAL Y+N++L N L K+G VT+ D HL V+KNP V N EV + T V+RA++ + +MYASID V+D V RKLRKYKER +D HR A + F++E + +F + A SD+ DMS++K+K+FPM P +VEEAVLCL+YI+HDFYVFKNK++G I VVYKRNHGGVGLIEP+ Sbjct: 79 MSSAVKIPITISGNNVELTPALKQYINEKLTNTLSKVGRLVTRCDAHLTVDKNPSVENNANFEVVVSVKGT-VMRASKSTHDMYASIDAVADSVKRKLRKYKERIIDA--HRQGKPEA-----IGFDEEEIQ--SFKDFAQEVAKMDSDIPVPPADMSLMKKKTFPMDPISVEEAVLCLDYIEHDFYVFKNKENGKIAVVYKRNHGGVGLIEPQ 282
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: L1J9F8_GUITC (Ribosom_S30AE_C domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J9F8_GUITC) HSP 1 Score: 192 bits (487), Expect = 1.940e-55 Identity = 106/212 (50.00%), Postives = 140/212 (66.04%), Query Frame = 2 Query: 284 MKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919 M A K PI ISGNN+++TPAL Y+N++L N L K+G VT+ D HL V+KNP V N EV + T V+RA++ + +MYASID V+D V RKLRKYKER +D HR A + F++E + + + DMS++K+K+FPM P +VE+AVLCL+YI+HDFYVFKNK++G I VVYKRNHGGVGLIEP+ Sbjct: 1 MSSAVKIPITISGNNVELTPALKQYINEKLTNTLSKVGRLVTRCDAHLTVDKNPSVENNANFEVVVSVKGT-VMRASKSTHDMYASIDAVADSVKRKLRKYKERIIDA--HRQGKPEA-----MGFDEEEIQGFKDFTQEVAKMENSLPVPPADMSLMKKKTFPMEPISVEDAVLCLDYIEHDFYVFKNKENGKIAVVYKRNHGGVGLIEPQ 204
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A7S2SIX8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIX8_9STRA) HSP 1 Score: 186 bits (471), Expect = 7.110e-52 Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = 2 Query: 299 KKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEY---VDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPE 919 + P++++GNN+++TP L DY ++++E V+ K + K D+HL V +NP V N H+AE T+ + K IR++ SENMYASID+++D ++RKLRKYKER+ +Q A + E+ F AAT Y +DM +VK K F M P T EEAVLCLEYIDH FYVF+N ++G INVVYKRNHGGVGLIEP+ Sbjct: 93 RTPMIVTGNNVEMTPTLKDYAHEKIEKVVGKHREYILKTDIHLTVTRNPSVKNAHIAEATV-SVKGNTIRSSHHSENMYASIDMMADGLARKLRKYKERRTNQMHASHGHSALREVEDPELEEMNEVEDDFADYQEEAAT------YGPAIDMDIVKNKKFKMDPITAEEAVLCLEYIDHPFYVFRNSETGDINVVYKRNHGGVGLIEPD 295
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Match: A0A8J6C5Z9_DIALT (Ribosom_S30AE_C domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Z9_DIALT) HSP 1 Score: 181 bits (459), Expect = 6.680e-51 Identity = 106/239 (44.35%), Postives = 143/239 (59.83%), Query Frame = 2 Query: 224 SFGVSAGTRVAVGAKQMTASMKEASKKPILISGNNIDVTPALMDYVNKRLENVLDKLGADVTKVDVHLAVNKNPRVTNGHVAEVTIFASKTPVIRAAEGSENMYASIDLVSDRVSRKLRKYKERKVDQKRHRASLGAAAAEAEVAFEKEGVPAGTFVPPNRTAATDISDLEYVDMSVVKRKSFPMPPQTVEEAVLCLEYIDHDFYVFKNKDSGHINVVYKRNHGGVGLIEPEKV*GAGA 940 S G R AV A+ + + PI ISGNN+++T A+ YV++++ L K V++ D HL+V +N RV GH EV F SK VIRAAE SE+MY+SIDLV+ +++RKLRK KER+ D + + VP + AA D L+ SVV+ K F MPPQT+E+A++CLEY+DH FYVF+N SG INV+YKRN GG+GLIEP+K+ G A Sbjct: 15 SAGAWRAPRPAVRARASRMAAVRMYETPITISGNNVELTEAMKAYVDEKVGAALSKFVPMVSRCDAHLSVIRNARVAQGHTCEVVCF-SKGAVIRAAERSESMYSSIDLVAAKLARKLRKLKERRQD-------------------KGDRVPTNELFEADEPAAVDEPVLDAA--SVVRTKRFQMPPQTLEDAIVCLEYVDHPFYVFRNSASGEINVIYKRNEGGIGLIEPDKLSGEAA 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig113.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig113.5.1 >prot_P-wetherbeei_contig113.5.1 ID=prot_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=242bp MWRHRGLSFGVSAGTRVAVGAKQMTASMKEASKKPILISGNNIDVTPALMback to top mRNA from alignment at P-wetherbeei_contig113:5977..9435+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig113.5.1 ID=mRNA_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3459bp|location=Sequence derived from alignment at P-wetherbeei_contig113:5977..9435+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig113:5977..9435+ >mRNA_P-wetherbeei_contig113.5.1 ID=mRNA_P-wetherbeei_contig113.5.1|Name=mRNA_P-wetherbeei_contig113.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=726bp|location=Sequence derived from alignment at P-wetherbeei_contig113:5977..9435+ (Phaeothamnion wetherbeei SAG_119_79)back to top |